FFCP PHASE1:Hg19::chr19:35264089..35264146,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=148103 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26408 | |||
|TSSclassifier=strong | |||
|UniProt=Q96NL3 | |||
|association_with_transcript=0bp_to_ENST00000329285,ENST00000379196,NM_001007248,uc010edm.1,uc010edn.1,uc010edo.1,uc010xsd.1_5end | |||
|cluster_id=chr19:35264089..35264146,- | |||
|description=CAGE_peak_1_at_ZNF599_5end | |||
|id=chr19:35264089..35264146,- | |||
|ontology_enrichment_celltype=CL:0000055!3.23e-13!180;CL:0000057!3.03e-07!75 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.02e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.27e-19!365;UBERON:0003075!1.58e-15!86;UBERON:0007284!1.58e-15!86;UBERON:0000924!2.02e-15!173;UBERON:0006601!2.02e-15!173;UBERON:0004121!2.16e-15!169;UBERON:0002346!2.45e-15!90;UBERON:0000153!1.30e-14!129;UBERON:0007811!1.30e-14!129;UBERON:0005743!1.55e-14!86;UBERON:0000033!1.76e-14!123;UBERON:0000119!3.66e-14!312;UBERON:0000483!4.76e-14!309;UBERON:0000073!5.14e-14!94;UBERON:0001016!5.14e-14!94;UBERON:0001017!1.23e-13!82;UBERON:0000955!1.97e-13!69;UBERON:0006238!1.97e-13!69;UBERON:0001049!2.20e-13!57;UBERON:0005068!2.20e-13!57;UBERON:0006241!2.20e-13!57;UBERON:0007135!2.20e-13!57;UBERON:0002616!2.54e-13!59;UBERON:0000481!6.91e-12!347;UBERON:0003056!1.25e-11!61;UBERON:0000477!3.69e-11!286;UBERON:0004111!6.18e-10!241;UBERON:0000025!1.34e-09!194;UBERON:0002780!4.59e-09!41;UBERON:0001890!4.59e-09!41;UBERON:0006240!4.59e-09!41;UBERON:0003080!4.79e-09!42;UBERON:0000064!3.25e-08!219;UBERON:0007023!1.84e-07!115;UBERON:0001893!3.17e-07!34;UBERON:0002791!3.55e-07!33;UBERON:0002020!6.28e-07!34;UBERON:0003528!6.28e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;1.92e-08;53!UBERON:0002616;1.92e-08;53!UBERON:0002780;5.12e-07;41!UBERON:0001890;5.12e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.08e-15,132;UBERON:0003075,1.22e-15,82;UBERON:0007284,1.22e-15,82;UBERON:0004121,1.53e-15,171;UBERON:0000924,1.53e-15,171;UBERON:0006601,1.53e-15,171;UBERON:0002346,2.01e-15,86;UBERON:0000119,1.81e-14,309;UBERON:0000483,2.36e-14,306;UBERON:0001017,1.43e-13,81;UBERON:0000955,2.25e-13,68;UBERON:0006238,2.25e-13,68;UBERON:0010371,2.33e-13,104;UBERON:0001049,2.43e-13,56;UBERON:0005068,2.43e-13,56;UBERON:0006241,2.43e-13,56;UBERON:0007135,2.43e-13,56;UBERON:0000073,3.01e-13,53;UBERON:0002616,3.01e-13,53;UBERON:0001016,4.64e-13,89;UBERON:0003056,3.13e-11,61;UBERON:0004111,6.24e-10,240;UBERON:0000025,2.25e-09,192;UBERON:0002780,5.41e-09,41;UBERON:0001890,5.41e-09,41;UBERON:0003080,5.41e-09,41;UBERON:0006240,5.41e-09,41;UBERON:0007023,3.23e-07,114;UBERON:0001893,3.73e-07,34;UBERON:0003528,7.37e-07,34;UBERON:0002020,7.37e-07,34 | |||
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| |||
|short_description=p1@ZNF599 | |||
}} |
Latest revision as of 08:36, 17 September 2015
Short description: | p1@ZNF599 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZNF599_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000329285, ENST00000379196, NM_001007248, uc010edm.1, uc010edn.1, uc010edo.1, uc010xsd.1_5end |
EntrezGene: | ZNF599 |
HGNC: | 26408 |
UniProt: | Q96NL3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.02e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 1.08e-15 | 132 |
neural plate | 1.22e-15 | 82 |
presumptive neural plate | 1.22e-15 | 82 |
ectoderm-derived structure | 1.53e-15 | 171 |
ectoderm | 1.53e-15 | 171 |
presumptive ectoderm | 1.53e-15 | 171 |
neurectoderm | 2.01e-15 | 86 |
cell layer | 1.81e-14 | 309 |
epithelium | 2.36e-14 | 306 |
central nervous system | 1.43e-13 | 81 |
brain | 2.25e-13 | 68 |
future brain | 2.25e-13 | 68 |
ecto-epithelium | 2.33e-13 | 104 |
neural tube | 2.43e-13 | 56 |
neural rod | 2.43e-13 | 56 |
future spinal cord | 2.43e-13 | 56 |
neural keel | 2.43e-13 | 56 |
regional part of nervous system | 3.01e-13 | 53 |
regional part of brain | 3.01e-13 | 53 |
nervous system | 4.64e-13 | 89 |
pre-chordal neural plate | 3.13e-11 | 61 |
anatomical conduit | 6.24e-10 | 240 |
tube | 2.25e-09 | 192 |
regional part of forebrain | 5.41e-09 | 41 |
forebrain | 5.41e-09 | 41 |
anterior neural tube | 5.41e-09 | 41 |
future forebrain | 5.41e-09 | 41 |
adult organism | 3.23e-07 | 114 |
telencephalon | 3.73e-07 | 34 |
brain grey matter | 7.37e-07 | 34 |
gray matter | 7.37e-07 | 34 |