FFCP PHASE1:Hg19::chr17:72759260..72759268,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9368 | |EntrezGene=9368 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11075 | |HGNC=11075 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-439bp_to_BX648303_5end | |association_with_transcript=-439bp_to_BX648303_5end | ||
|cluster_id=chr17:72759260..72759268,+ | |||
|coexpression_cluster_id=C2435 | |coexpression_cluster_id=C2435 | ||
|description=CAGE_peak_10_at_SLC9A3R1_5end | |description=CAGE_peak_10_at_SLC9A3R1_5end | ||
|id=chr17:72759260..72759268,+ | |id=chr17:72759260..72759268,+ | ||
|ontology_enrichment_celltype=CL:0002563!1.98e-07!4 | |ontology_enrichment_celltype=CL:0002563!1.98e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000632;1.35e-09;3!CL:0002563;1.64e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000632,1.19e-09,3;CL:0002563,1.69e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003127!1.86e-13!2;UBERON:0000160!1.43e-10!27;UBERON:0004921!1.55e-10!129;UBERON:0004185!1.55e-10!129;UBERON:0005409!2.65e-10!35;UBERON:0005172!1.03e-09!55;UBERON:0005173!1.03e-09!55;UBERON:0004119!1.81e-09!169;UBERON:0000925!1.81e-09!169;UBERON:0006595!1.81e-09!169;UBERON:0001007!2.09e-09!155;UBERON:0001555!2.09e-09!155;UBERON:0007026!2.09e-09!155;UBERON:0002417!1.37e-08!61;UBERON:0000916!1.37e-08!61;UBERON:0005057!4.81e-08!26;UBERON:0003929!5.24e-08!54;UBERON:0001301!1.58e-07!1;UBERON:0001242!1.98e-07!4;UBERON:0001262!1.98e-07!4;UBERON:0004786!1.98e-07!4;UBERON:0004808!1.98e-07!4;UBERON:0001277!1.98e-07!4;UBERON:0005177!2.29e-07!107;UBERON:0001882!2.98e-07!1;UBERON:0005403!2.98e-07!1;UBERON:0001155!5.82e-07!9;UBERON:0009569!7.55e-07!113 | |ontology_enrichment_uberon=UBERON:0003127!1.86e-13!2;UBERON:0000160!1.43e-10!27;UBERON:0004921!1.55e-10!129;UBERON:0004185!1.55e-10!129;UBERON:0005409!2.65e-10!35;UBERON:0005172!1.03e-09!55;UBERON:0005173!1.03e-09!55;UBERON:0004119!1.81e-09!169;UBERON:0000925!1.81e-09!169;UBERON:0006595!1.81e-09!169;UBERON:0001007!2.09e-09!155;UBERON:0001555!2.09e-09!155;UBERON:0007026!2.09e-09!155;UBERON:0002417!1.37e-08!61;UBERON:0000916!1.37e-08!61;UBERON:0005057!4.81e-08!26;UBERON:0003929!5.24e-08!54;UBERON:0001301!1.58e-07!1;UBERON:0001242!1.98e-07!4;UBERON:0001262!1.98e-07!4;UBERON:0004786!1.98e-07!4;UBERON:0004808!1.98e-07!4;UBERON:0001277!1.98e-07!4;UBERON:0005177!2.29e-07!107;UBERON:0001882!2.98e-07!1;UBERON:0005403!2.98e-07!1;UBERON:0001155!5.82e-07!9;UBERON:0009569!7.55e-07!113 | ||
|ontology_enrichment_uberon_v019=UBERON:0002108;5.86e-45;4!UBERON:0000160;1.76e-34;17!UBERON:0005409;4.36e-27;22!UBERON:0004921;1.04e-16;33!UBERON:0002114;1.35e-09;2!UBERON:0001555;1.41e-07;54!UBERON:0001242;1.64e-07;4!UBERON:0001262;1.64e-07;4!UBERON:0004786;1.64e-07;4!UBERON:0004808;1.64e-07;4!UBERON:0001277;1.64e-07;4!UBERON:0001007;5.00e-07;81!UBERON:0000922;7.11e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,8.55e-45,4;UBERON:0000160,1.83e-34,17;UBERON:0005409,5.33e-24,25;UBERON:0002114,1.67e-09,2;UBERON:0004921,1.38e-07,118;UBERON:0001242,1.69e-07,4;UBERON:0001262,1.69e-07,4;UBERON:0004786,1.69e-07,4;UBERON:0004808,1.69e-07,4;UBERON:0001277,1.69e-07,4 | |||
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|short_description=p10@SLC9A3R1 | |short_description=p10@SLC9A3R1 | ||
}} | }} |
Latest revision as of 08:51, 17 September 2015
Short description: | p10@SLC9A3R1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_SLC9A3R1_5end |
Coexpression cluster: | C2435_kidney_colon_small_temporal_duodenum_Hepatocyte_Intestinal |
Association with transcript: | -439bp_to_BX648303_5end |
EntrezGene: | SLC9A3R1 |
HGNC: | 11075 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stellate cell | 1.19e-09 | 3 |
intestinal epithelial cell | 1.69e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
small intestine | 8.55e-45 | 4 |
intestine | 1.83e-34 | 17 |
gastrointestinal system | 5.33e-24 | 25 |
duodenum | 1.67e-09 | 2 |
subdivision of digestive tract | 1.38e-07 | 118 |
intestinal mucosa | 1.69e-07 | 4 |
wall of intestine | 1.69e-07 | 4 |
gastrointestinal system mucosa | 1.69e-07 | 4 |
gastrointestinal system epithelium | 1.69e-07 | 4 |
intestinal epithelium | 1.69e-07 | 4 |