FFCP PHASE1:Hg19::chr1:29138600..29138609,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4985 | |EntrezGene=4985 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8153 | |HGNC=8153 | ||
|TSSclassifier=strong | |||
|UniProt=P41143 | |UniProt=P41143 | ||
|association_with_transcript=-44bp_to_ENST00000234961,NM_000911,uc001brf.1_5end | |association_with_transcript=-44bp_to_ENST00000234961,NM_000911,uc001brf.1_5end | ||
|cluster_id=chr1:29138600..29138609,+ | |||
|coexpression_cluster_id=C53 | |coexpression_cluster_id=C53 | ||
|description=CAGE_peak_4_at_OPRD1_5end | |description=CAGE_peak_4_at_OPRD1_5end | ||
|id=chr1:29138600..29138609,+ | |id=chr1:29138600..29138609,+ | ||
|ontology_enrichment_celltype=CL:0002322!1.67e-13!5;CL:0000080!2.53e-07!6;CL:0000148!6.29e-07!10;CL:0000541!6.29e-07!10 | |ontology_enrichment_celltype=CL:0002322!1.67e-13!5;CL:0000080!2.53e-07!6;CL:0000148!6.29e-07!10;CL:0000541!6.29e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000333;3.00e-40;5!CL:0002321;3.04e-14;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000333,2.84e-11,41;CL:0000133,3.34e-08,59;CL:0000221,6.64e-07,72 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.49e-07;82 | |||
|ontology_enrichment_disease=DOID:169!1.80e-07!6 | |ontology_enrichment_disease=DOID:169!1.80e-07!6 | ||
|ontology_enrichment_disease_v019=DOID:169;9.08e-34;6!DOID:171;8.98e-21;10!DOID:3095;4.64e-10;22!DOID:2994;4.64e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:169,9.87e-34,6;DOID:171,9.44e-21,10;DOID:3095,4.74e-10,22;DOID:2994,4.74e-10,22 | |||
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|ontology_enrichment_uberon_v019=UBERON:0000013;3.00e-40;5!UBERON:0002410;3.00e-40;5!UBERON:0000010;6.07e-23;8!UBERON:0002021;3.42e-11;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,3.31e-40,5;UBERON:0002410,3.31e-40,5;UBERON:0000010,6.41e-23,8;UBERON:0002021,3.26e-11,5;UBERON:0001016,1.88e-09,89 | |||
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| ||
|short_description=p4@OPRD1 | |short_description=p4@OPRD1 | ||
}} | }} |
Latest revision as of 11:05, 17 September 2015
Short description: | p4@OPRD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_OPRD1_5end |
Coexpression cluster: | C53_medulloblastoma_pineal_retinoblastoma_small_retina_eye_pituitary |
Association with transcript: | -44bp_to_ENST00000234961, NM_000911, uc001brf.1_5end |
EntrezGene: | OPRD1 |
HGNC: | 8153 |
UniProt: | P41143 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 2.84e-11 | 41 |
neurectodermal cell | 3.34e-08 | 59 |
ectodermal cell | 6.64e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 3.31e-40 | 5 |
autonomic nervous system | 3.31e-40 | 5 |
peripheral nervous system | 6.41e-23 | 8 |
occipital lobe | 3.26e-11 | 5 |
nervous system | 1.88e-09 | 89 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 9.87e-34 | 6 |
neuroectodermal tumor | 9.44e-21 | 10 |
germ cell and embryonal cancer | 4.74e-10 | 22 |
germ cell cancer | 4.74e-10 | 22 |