FFCP PHASE1:Hg19::chr6:27782962..27782988,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8342 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4750 | |||
|TSSclassifier=strong | |||
|UniProt=Q99879 | |||
|association_with_transcript=140bp_to_BC066244,BC067485,BC067486,BC067487,BC067488,BC067489_5end | |||
|cluster_id=chr6:27782962..27782988,+ | |||
|description=CAGE_peak_4_at_HIST1H2BM_5end | |||
|id=chr6:27782962..27782988,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002577;3.23e-09;3!CL:0000764;3.94e-07;2!CL:0000558;3.94e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,2.26e-09,3;CL:0000817,5.42e-09,3;CL:0000764,3.53e-07,2;CL:0000765,3.53e-07,2;CL:0000050,3.53e-07,2;CL:0000038,3.53e-07,2;CL:0000558,3.53e-07,2;CL:0000547,3.53e-07,2;CL:0000549,3.53e-07,2;CL:0000550,3.53e-07,2;CL:0000552,3.53e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000954;9.60e-07;2 | |||
|ontology_enrichment_disease=DOID:2531!1.58e-11!51;DOID:0060083!1.58e-11!51;DOID:1240!1.30e-08!39;DOID:0060058!4.51e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:74;7.51e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.36e-10,51;DOID:0060083,1.36e-10,51;DOID:1240,6.73e-08,39 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;5.31e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,4.08e-07,4;UBERON:0004340,4.08e-07,4 | |||
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| |||
|short_description=p4@HIST1H2BM | |||
}} |
Latest revision as of 11:17, 17 September 2015
Short description: | p4@HIST1H2BM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_HIST1H2BM_5end |
Coexpression cluster: | NA |
Association with transcript: | 140bp_to_BC066244, BC067485, BC067486, BC067487, BC067488, BC067489_5end |
EntrezGene: | HIST1H2BM |
HGNC: | 4750 |
UniProt: | Q99879 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 2.26e-09 | 3 |
precursor B cell | 5.42e-09 | 3 |
erythroid lineage cell | 3.53e-07 | 2 |
erythroblast | 3.53e-07 | 2 |
megakaryocyte-erythroid progenitor cell | 3.53e-07 | 2 |
erythroid progenitor cell | 3.53e-07 | 2 |
reticulocyte | 3.53e-07 | 2 |
proerythroblast | 3.53e-07 | 2 |
basophilic erythroblast | 3.53e-07 | 2 |
polychromatophilic erythroblast | 3.53e-07 | 2 |
orthochromatic erythroblast | 3.53e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.36e-10 | 51 |
immune system cancer | 1.36e-10 | 51 |
leukemia | 6.73e-08 | 39 |