FFCP PHASE1:Hg19::chr4:26324474..26324501,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3516 | |EntrezGene=3516 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5724 | |HGNC=5724 | ||
|TSSclassifier=strong | |||
|UniProt=D6R9K5 | |UniProt=D6R9K5 | ||
|association_with_transcript=0bp_to_ENST00000514675_5end | |association_with_transcript=0bp_to_ENST00000514675_5end | ||
|cluster_id=chr4:26324474..26324501,+ | |||
|coexpression_cluster_id=C54 | |||
|description=CAGE_peak_16_at_RBPJ_5end | |description=CAGE_peak_16_at_RBPJ_5end | ||
|id=chr4:26324474..26324501,+ | |id=chr4:26324474..26324501,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000840;5.23e-19;5!CL:0000990;1.00e-12;8!CL:0002540;9.48e-11;6!CL:0000451;1.97e-10;10!CL:0000214;6.00e-10;3!CL:0002582;1.52e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000840,5.23e-19,5;CL:0001029,5.23e-19,5;CL:0000990,1.00e-12,8;CL:0002540,1.07e-10,6;CL:0000451,1.97e-10,10;CL:0000214,5.74e-10,3;CL:0002582,1.07e-09,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060060;3.70e-08;1!DOID:0060061;3.70e-08;1!DOID:8691;3.70e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,4.11e-08,1;DOID:0060061,4.11e-08,1;DOID:8691,4.11e-08,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0006915;6.00e-10;3!UBERON:0007616;6.00e-10;3!UBERON:0002217;6.00e-10;3!UBERON:0002018;6.00e-10;3!UBERON:0002390;4.36e-07;32!UBERON:0002331;7.91e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,5.74e-10,3;UBERON:0007616,5.74e-10,3;UBERON:0002217,5.74e-10,3;UBERON:0002018,5.74e-10,3;UBERON:0002331,7.76e-07,10;UBERON:0000358,7.76e-07,10;UBERON:0000307,7.76e-07,10;UBERON:0000091,7.76e-07,10;UBERON:0000087,7.76e-07,10;UBERON:0007010,7.76e-07,10;UBERON:0007806,7.76e-07,10;UBERON:0008780,7.76e-07,10;UBERON:0005728,7.76e-07,10 | |||
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| 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| ||
|short_description=p16@RBPJ | |short_description=p16@RBPJ | ||
}} | }} |
Latest revision as of 11:20, 17 September 2015
Short description: | p16@RBPJ |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_RBPJ_5end |
Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
Association with transcript: | 0bp_to_ENST00000514675_5end |
EntrezGene: | RBPJ |
HGNC: | 5724 |
UniProt: | D6R9K5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 5.23e-19 | 5 |
common dendritic progenitor | 5.23e-19 | 5 |
conventional dendritic cell | 1.00e-12 | 8 |
mesenchymal stem cell of the bone marrow | 1.07e-10 | 6 |
dendritic cell | 1.97e-10 | 10 |
synovial cell | 5.74e-10 | 3 |
visceral preadipocyte | 1.07e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 5.74e-10 | 3 |
layer of synovial tissue | 5.74e-10 | 3 |
synovial joint | 5.74e-10 | 3 |
synovial membrane of synovial joint | 5.74e-10 | 3 |
umbilical cord | 7.76e-07 | 10 |
blastocyst | 7.76e-07 | 10 |
blastula | 7.76e-07 | 10 |
bilaminar disc | 7.76e-07 | 10 |
inner cell mass | 7.76e-07 | 10 |
cleaving embryo | 7.76e-07 | 10 |
connecting stalk | 7.76e-07 | 10 |
inner cell mass derived epiblast | 7.76e-07 | 10 |
extraembryonic mesoderm | 7.76e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 4.11e-08 | 1 |
cutaneous T cell lymphoma | 4.11e-08 | 1 |
mycosis fungoides | 4.11e-08 | 1 |