FFCP PHASE1:Hg19::chr19:35783038..35783039,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4099 | |EntrezGene=4099 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6783 | |HGNC=6783 | ||
|TSSclassifier=strong | |||
|UniProt=Q567S4,P20916,Q59GD9 | |UniProt=Q567S4,P20916,Q59GD9 | ||
|association_with_transcript=0bp_to_ENST00000392213,uc002nyx.1,uc002nyy.1,uc002nyz.1,uc010eds.1_5end | |association_with_transcript=0bp_to_ENST00000392213,uc002nyx.1,uc002nyy.1,uc002nyz.1,uc010eds.1_5end | ||
|cluster_id=chr19:35783038..35783039,+ | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_4_at_MAG_5end | |description=CAGE_peak_4_at_MAG_5end | ||
|id=chr19:35783038..35783039,+ | |id=chr19:35783038..35783039,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006222;2.08e-21;1!UBERON:0005425;5.16e-21;1!UBERON:0003056;6.78e-08;3!UBERON:0006601;5.49e-07;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.18e-82!57;UBERON:0005068!4.18e-82!57;UBERON:0006241!4.18e-82!57;UBERON:0007135!4.18e-82!57;UBERON:0001017!6.74e-67!82;UBERON:0002616!5.12e-64!59;UBERON:0005743!1.44e-63!86;UBERON:0000955!8.71e-62!69;UBERON:0006238!8.71e-62!69;UBERON:0000073!6.13e-61!94;UBERON:0001016!6.13e-61!94;UBERON:0002780!1.65e-56!41;UBERON:0001890!1.65e-56!41;UBERON:0006240!1.65e-56!41;UBERON:0003075!2.47e-56!86;UBERON:0007284!2.47e-56!86;UBERON:0003080!4.41e-55!42;UBERON:0002346!1.40e-53!90;UBERON:0007023!1.61e-50!115;UBERON:0001893!3.63e-50!34;UBERON:0002020!4.31e-50!34;UBERON:0003528!4.31e-50!34;UBERON:0002791!3.02e-46!33;UBERON:0001869!4.81e-42!32;UBERON:0003056!1.04e-36!61;UBERON:0002619!1.54e-35!22;UBERON:0000033!5.32e-35!123;UBERON:0001950!1.97e-33!20;UBERON:0000153!4.14e-33!129;UBERON:0007811!4.14e-33!129;UBERON:0002298!1.44e-32!8;UBERON:0004121!1.61e-31!169;UBERON:0000956!3.93e-31!25;UBERON:0000203!3.93e-31!25;UBERON:0000924!1.19e-30!173;UBERON:0006601!1.19e-30!173;UBERON:0003076!2.50e-27!15;UBERON:0003057!2.50e-27!15;UBERON:0000200!9.44e-22!6;UBERON:0002308!3.08e-21!9;UBERON:0000125!3.08e-21!9;UBERON:0000025!5.01e-20!194;UBERON:0004732!9.62e-20!13;UBERON:0000988!3.20e-17!3;UBERON:0006331!3.38e-17!3;UBERON:0001896!1.11e-16!3;UBERON:0005290!1.11e-16!3;UBERON:0010096!1.11e-16!3;UBERON:0001871!2.74e-16!7;UBERON:0002240!3.56e-16!3;UBERON:0002771!3.76e-16!3;UBERON:0004733!8.64e-16!12;UBERON:0002028!8.64e-16!12;UBERON:0007277!8.64e-16!12;UBERON:0002420!6.20e-15!9;UBERON:0007245!6.20e-15!9;UBERON:0010009!6.20e-15!9;UBERON:0010011!6.20e-15!9;UBERON:0000454!6.20e-15!9;UBERON:0004111!6.70e-15!241;UBERON:0000477!1.19e-12!286;UBERON:0009663!1.34e-12!7;UBERON:0005162!1.83e-12!2;UBERON:0000122!1.83e-12!2;UBERON:0001897!2.42e-12!2;UBERON:0002148!5.82e-12!2;UBERON:0009662!5.82e-12!2;UBERON:0000483!3.53e-11!309;UBERON:0000119!5.22e-11!312;UBERON:0000475!3.04e-10!365;UBERON:0000349!3.95e-10!5;UBERON:0005174!6.50e-10!5;UBERON:0001137!6.50e-10!5;UBERON:0002021!6.92e-10!5;UBERON:0000064!1.13e-09!219;UBERON:0001894!7.71e-08!7;UBERON:0006222!7.71e-08!7;UBERON:0002336!4.09e-07!1;UBERON:0001018!4.09e-07!1;UBERON:0002473!4.09e-07!1;UBERON:0005340!4.09e-07!1;UBERON:0002316!4.09e-07!1;UBERON:0003544!4.09e-07!1;UBERON:0001020!4.09e-07!1;UBERON:0005970!4.09e-07!1;UBERON:0002437!4.09e-07!1;UBERON:0000941!5.13e-07!1;UBERON:0004904!5.13e-07!1;UBERON:0002464!5.13e-07!1;UBERON:0001021!5.13e-07!1;UBERON:0001785!5.13e-07!1;UBERON:0002038!6.08e-07!1;UBERON:0009661!6.08e-07!1;UBERON:0003112!7.60e-07!1;UBERON:0000032!7.60e-07!1;UBERON:0005253!7.60e-07!1;UBERON:0003128!7.60e-07!1;UBERON:0002241!7.60e-07!1;UBERON:0001703!7.60e-07!1;UBERON:0004761!7.60e-07!1;UBERON:0009617!7.60e-07!1;UBERON:0001882!8.49e-07!1;UBERON:0005403!8.49e-07!1;UBERON:0002581!9.48e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0005162;1.10e-40;2!UBERON:0000122;1.10e-40;2!UBERON:0001897;1.49e-40;2!UBERON:0010225;1.49e-40;2!UBERON:0002298;4.15e-30;6!UBERON:0000988;3.56e-27;3!UBERON:0001894;2.91e-26;7!UBERON:0004732;1.42e-24;13!UBERON:0002336;1.53e-21;1!UBERON:0011215;1.53e-21;1!UBERON:0001018;1.53e-21;1!UBERON:0002473;1.53e-21;1!UBERON:0005340;1.53e-21;1!UBERON:0003544;1.53e-21;1!UBERON:0005970;1.53e-21;1!UBERON:0002316;1.53e-21;1!UBERON:0001020;1.53e-21;1!UBERON:0002437;1.53e-21;1!UBERON:0002038;5.16e-21;1!UBERON:0000941;5.16e-21;1!UBERON:0001785;5.16e-21;1!UBERON:0002464;5.16e-21;1!UBERON:0004904;5.16e-21;1!UBERON:0001021;5.16e-21;1!UBERON:0009661;5.16e-21;1!UBERON:0002950;5.16e-21;1!UBERON:0001891;5.16e-21;1!UBERON:0002784;7.35e-21;4!UBERON:0000073;8.69e-21;53!UBERON:0002616;8.69e-21;53!UBERON:0004733;1.92e-15;12!UBERON:0002028;1.92e-15;12!UBERON:0002780;5.49e-13;41!UBERON:0001890;5.49e-13;41!UBERON:0002148;3.34e-11;2!UBERON:0003714;3.34e-11;2!UBERON:0006331;3.34e-11;2!UBERON:0009662;3.34e-11;2!UBERON:0002680;9.65e-10;9!UBERON:0000125;9.65e-10;9!UBERON:0002308;9.65e-10;9!UBERON:0001895;9.65e-10;9!UBERON:0007023;2.24e-09;114!UBERON:0001016;2.80e-09;83!UBERON:0000955;2.06e-08;68!UBERON:0001896;6.78e-08;3!UBERON:0005290;6.78e-08;3!UBERON:0001017;4.69e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005162,7.33e-41,2;UBERON:0000122,7.33e-41,2;UBERON:0001897,2.01e-40,2;UBERON:0010225,2.01e-40,2;UBERON:0002298,2.78e-30,6;UBERON:0000073,3.04e-29,53;UBERON:0002616,3.04e-29,53;UBERON:0001049,1.08e-27,56;UBERON:0005068,1.08e-27,56;UBERON:0006241,1.08e-27,56;UBERON:0007135,1.08e-27,56;UBERON:0000988,3.11e-27,3;UBERON:0001894,3.45e-26,7;UBERON:0006222,3.45e-26,7;UBERON:0004732,9.82e-25,13;UBERON:0003075,2.01e-23,82;UBERON:0007284,2.01e-23,82;UBERON:0000955,1.68e-22,68;UBERON:0006238,1.68e-22,68;UBERON:0002346,2.49e-22,86;UBERON:0002336,1.53e-21,1;UBERON:0011215,1.53e-21,1;UBERON:0001018,1.53e-21,1;UBERON:0002473,1.53e-21,1;UBERON:0005340,1.53e-21,1;UBERON:0003544,1.53e-21,1;UBERON:0005970,1.53e-21,1;UBERON:0002316,1.53e-21,1;UBERON:0001020,1.53e-21,1;UBERON:0002437,1.53e-21,1;UBERON:0000941,3.45e-21,1;UBERON:0001785,3.45e-21,1;UBERON:0002464,3.45e-21,1;UBERON:0004904,3.45e-21,1;UBERON:0001021,3.45e-21,1;UBERON:0003902,3.45e-21,1;UBERON:0005425,3.45e-21,1;UBERON:0001016,4.23e-21,89;UBERON:0002038,6.31e-21,1;UBERON:0009661,6.31e-21,1;UBERON:0002950,6.31e-21,1;UBERON:0001891,6.31e-21,1;UBERON:0009616,6.31e-21,1;UBERON:0010286,6.31e-21,1;UBERON:0002784,8.55e-21,4;UBERON:0001017,6.28e-19,81;UBERON:0010371,1.91e-18,104;UBERON:0007023,5.86e-17,114;UBERON:0002780,6.21e-17,41;UBERON:0001890,6.21e-17,41;UBERON:0003080,6.21e-17,41;UBERON:0006240,6.21e-17,41;UBERON:0004733,1.57e-15,12;UBERON:0002028,1.57e-15,12;UBERON:0007277,1.57e-15,12;UBERON:0003056,1.85e-15,61;UBERON:0010314,1.77e-14,132;UBERON:0003076,1.46e-12,15;UBERON:0003057,1.46e-12,15;UBERON:0003714,2.73e-11,2;UBERON:0002148,3.02e-11,2;UBERON:0006331,3.02e-11,2;UBERON:0009662,3.02e-11,2;UBERON:0004121,5.90e-11,171;UBERON:0000924,5.90e-11,171;UBERON:0006601,5.90e-11,171;UBERON:0002680,9.24e-10,9;UBERON:0001895,9.24e-10,9;UBERON:0010092,9.24e-10,9;UBERON:0000125,9.65e-10,9;UBERON:0002308,9.65e-10,9;UBERON:0011216,2.87e-08,223;UBERON:0001896,5.54e-08,3;UBERON:0005290,5.54e-08,3;UBERON:0010096,5.54e-08,3;UBERON:0000025,7.08e-08,192 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.844016498463076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.74214478529481,0,0,0,0,0,0,0,0,0,0,0,0.60298219312704,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10045211711114,0,2.10838001152805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379864775735272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.684526894459965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.425246896606173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42211251997706,0.66116300871345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.250381861413,0.573409195690071,0.554645257684261,1.67660287941735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.834979926253974,0,0.478901577171454,0.205116364240755,0,0.691572524642179,0.968853873791107,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.675375846183947,0,0,1.07806877329642,0,0,0,0,0,0,0,0,0,0,0,0,1.2914249265598,0.789273282754189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588925401344836,0.594092800654172,0.4226557275834,0,0,0,0,0,0,0,0,0,1.14671666521161,0,0.611923411718232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48750831837634,1.13776295448085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.844016498463076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.74214478529481,0,0,0,0,0,0,0,0,0,0,0,0.60298219312704,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10045211711114,0,2.10838001152805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379864775735272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.684526894459965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.425246896606173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42211251997706,0.66116300871345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.250381861413,0.573409195690071,0.554645257684261,1.67660287941735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.834979926253974,0,0.478901577171454,0.205116364240755,0,0.691572524642179,0.968853873791107,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.675375846183947,0,0,1.07806877329642,0,0,0,0,0,0,0,0,0,0,0,0,1.2914249265598,0.789273282754189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588925401344836,0.594092800654172,0.4226557275834,0,0,0,0,0,0,0,0,0,1.14671666521161,0,0.611923411718232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48750831837634,1.13776295448085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p4@MAG | |short_description=p4@MAG | ||
}} | }} |
Latest revision as of 11:25, 17 September 2015
Short description: | p4@MAG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MAG_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000392213, uc002nyx.1, uc002nyy.1, uc002nyz.1, uc010eds.1_5end |
EntrezGene: | MAG |
HGNC: | 6783 |
UniProt: | Q567S4P20916Q59GD9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data