FFCP PHASE1:Hg19::chr15:39886357..39886368,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7057 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11785 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=88bp_to_ENST00000559746_5end | |||
|cluster_id=chr15:39886357..39886368,+ | |||
|coexpression_cluster_id=C142 | |||
|description=CAGE_peak_31_at_THBS1_5end | |||
|id=chr15:39886357..39886368,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.61e-13!180;CL:0002371!1.21e-12!591;CL:0000057!2.56e-12!75;CL:0000548!9.02e-12!679;CL:0000004!9.02e-12!679;CL:0000255!9.02e-12!679;CL:0000144!1.16e-11!625;CL:0000115!1.35e-11!35;CL:0000012!2.34e-11!682;CL:0000222!3.03e-11!119;CL:0002139!3.79e-11!24;CL:0000220!7.07e-09!246;CL:0002078!1.33e-08!44;CL:0002321!1.44e-08!248;CL:0000071!7.46e-08!18;CL:0002546!7.46e-08!18;CL:0000213!1.14e-07!57;CL:0000215!1.14e-07!57;CL:0002334!1.76e-07!12;CL:0000063!3.53e-07!578;CL:0000003!8.60e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0002620;5.14e-13;23!CL:0002334;9.38e-09;12!CL:0000057;2.86e-07;73!CL:0002580;4.95e-07;3!CL:0002615;8.82e-07;3!CL:0000349;9.32e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,8.06e-19,76;CL:0002620,2.15e-13,23;CL:0002334,7.78e-09,12;CL:0000048,1.20e-07,427;CL:0000723,2.81e-07,433;CL:0002580,4.42e-07,3;CL:0000034,8.36e-07,441 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;3.57e-09;5!DOID:450;3.57e-09;5!DOID:66;3.57e-09;5!DOID:423;3.57e-09;5!DOID:0080000;3.57e-09;5!DOID:11722;3.57e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.02e-09,5;DOID:450,2.02e-09,5;DOID:66,2.02e-09,5;DOID:423,2.02e-09,5;DOID:0080000,2.02e-09,5;DOID:11722,2.02e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0000055!5.19e-15!69;UBERON:0002049!1.69e-14!79;UBERON:0007798!1.69e-14!79;UBERON:0001981!1.59e-13!60;UBERON:0007500!1.59e-13!60;UBERON:0004537!1.59e-13!60;UBERON:0006965!1.59e-13!60;UBERON:0004872!4.25e-13!84;UBERON:0003914!5.71e-10!118;UBERON:0001009!9.87e-10!113;UBERON:0001637!1.30e-09!42;UBERON:0003509!1.30e-09!42;UBERON:0004572!1.30e-09!42;UBERON:0004535!1.38e-09!110;UBERON:0001986!7.46e-08!18;UBERON:0004638!7.46e-08!18;UBERON:0004852!7.46e-08!18;UBERON:0000490!9.96e-08!138;UBERON:0003102!2.62e-07!95;UBERON:0000487!2.94e-07!22;UBERON:0000468!3.89e-07!659;UBERON:0005631!7.93e-07!14;UBERON:0000158!7.93e-07!14;UBERON:0004923!9.04e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.94e-11;6!UBERON:0002358;1.94e-11;6!UBERON:0003684;1.94e-11;6!UBERON:0001178;1.94e-11;6!UBERON:0005631;1.28e-09;10!UBERON:0000158;1.28e-09;10!UBERON:0002097;3.16e-09;41!UBERON:0000305;1.77e-08;7!UBERON:0002199;2.52e-07;46!UBERON:0002416;2.52e-07;46!UBERON:0004457;2.79e-07;9!UBERON:0000042;2.79e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,4.09e-12,41;UBERON:0003688,1.85e-11,6;UBERON:0002358,1.85e-11,6;UBERON:0003684,1.85e-11,6;UBERON:0001178,1.85e-11,6;UBERON:0002199,2.48e-11,46;UBERON:0002416,2.48e-11,46;UBERON:0004871,1.39e-09,8;UBERON:0000305,2.64e-08,7;UBERON:0004923,6.10e-08,66;UBERON:0005631,7.96e-08,14;UBERON:0000158,7.96e-08,14 | |||
|phase1_expression=5.4503513781167,12.203729861786,2.11431606143957,19.0139266870948,4.02264984984559,7.85104671690332,0,0,0,0.245733936501509,0,1.09220686065086,1.58260186937072,0.123766352960047,0,2.6893005858071,3.01347264011988,0.730310090387373,1.95173119516203,0.123121058076788,0,0,0,0.136874425072884,0.376627918784408,0,0,0,0,0,0.154816123316076,0.919421224478927,0,0,0,0,0,0,1.20326668482085,0,0.447830948479849,0,0.515151135268373,0.436194716338694,0.377875943688809,0,0.929716147622738,0,0,2.3015391385772,0.256160706529101,0,1.37898272294647,0,0,1.12945403725563,0,0.224723484445085,2.14258724659632,0,0,0.659702600373432,0,0,3.48251086354301,0,0,0.75374599577023,0,0.217188844705117,1.81619850790011,0,0,0,0,0,0,0.450530678524519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15076305659177,0.361439152384566,1.50401373190767,0.434539556882471,0.795285947051099,0.973269740605272,0,0.221729397462564,0.087834785693126,0.0654895377488563,0.364295288292542,0,0,0,0,0,0,0,0.79504962946682,0,1.38856200643038,0.56530794192401,0.838998872419812,2.20094433552054,1.46296476575767,0.516833518338658,1.42306505074684,2.34304428935269,1.20848795132744,0.760272105718513,1.46437234528902,0.367663080345869,7.29127753093584,0.803697554556718,0.44905874525234,0.788280363383256,0,0.949265659568129,0.916008719652036,0,0,0.436094052142534,6.95760732373446,2.27934920996244,0.926864265692532,1.72101972449288,0.354668382198357,0,3.20246987189115,2.4666754841716,0,0.404132016209064,0.163461903113459,0.302714855289863,0,0,0,0,0,0,0,0,0,0.245668634623536,0.413303124703062,0,7.17074094907815,0,0,0,0.125118519871964,0,0.438977620880838,4.59731693698529,1.05166641234618,0.340296549480063,3.7671823494661,2.13557388818567,2.96704661623387,3.00091096084402,1.95799805553034,2.06112432036503,1.30281799432113,1.85653965465393,1.55899208257918,1.7670364197088,2.02509777013059,1.61646056818812,3.19508633264953,1.81353776809752,1.18692414617341,1.15956511897978,0.272746120590835,0,0,0,0,0,0,0.36497735907583,3.12899064659632,5.14592750554308,2.76269842704961,3.71494342425583,0.721879481669586,0.118306800039844,0.337169380156203,0,0.110293972732394,0.217879444092406,0.237270619111097,0,0.196221465125346,0.38474715694639,0,1.40241773803446,0,1.47008711385542,0,0,0,0,0,0,0.329250856225877,0,0,0.370353780634118,0.325808305310325,0,0,0,0,1.01056513432752,0.925971025153221,2.66355813128438,0,0.858486162094873,0,0,0,0,2.18376766658517,0.708875486211932,0.895585227028483,0,1.15014803749563,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0.387815147273333,0,1.690605505112,2.39344304926383,1.04007436911366,0.257207374262142,0,0,0.428933980974443,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,1.19812427745791,0,1.42636905040718,0.289562613335158,0,0.716243852959582,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,3.74347550755453,8.20773348466944,4.25796520591624,1.63997980989798,0.300946099727719,0,1.03473071292505,0.664225598535437,0.553107505625109,1.30325421702124,0,0,0,0,0,0,1.66435439510497,0.30239029332968,3.96972492510043,8.90079445070762,10.6650835884568,1.66580894032411,3.07024349440022,7.23842645146234,1.48418066444991,1.23367755042124,0.710246901252508,0,0.519254429183621,0.348631135379878,0.120859449591622,2.00506470303285,0.184161977871793,0.34444334449382,0.182091168006717,0.393373244878272,0,0,0,1.46139224653261,0,1.13733384070897,0.340187410553031,2.37507507712353,1.54227252690289,0,0,0.254876273045038,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0.650060246036521,1.6068392984416,0,0,0.15350367472613,0.413509717453592,0.214840489736547,0.145016693914229,0,0.0890320356467374,0.826424576804891,1.53752053892085,1.40373983744043,0.4046311234222,0,2.83331112147576,0,0.308033580176089,0,0,0.55597265731176,0,0,0.316379424718726,0.38126038784765,0,0,0,0,0.539617372749944,0,0.235624804691373,0,0,0.421258456238981,0,0.487426979262569,2.11300293513511,0.409499734223957,0.282810863907425,1.13008116620243,0.551365343546124,1.99031692572366,2.19225442626881,0,0,1.21746226177622,0.92947049429925,0.281695602532241,0.286822704408103,0.491245205065606,0.7133421029625,0,0,0,0.379473173765715,0,0.48111056362756,0,0,0,1.29151611801369,0,0.443430153536676,2.06751060186264,0,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.34242278632766,0.296964680832639,3.99308912729002,0,0,0.111308705022906,0,0,0,0,0,0,0,3.73247505194169,1.07842021376792,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.227884111694002,0,0,0,0.31900115973192,1.09917112082235,1.06606955203727,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0.277349346026277,0,0,0.174118413160805,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0.411125773940253,0,0,0,0.240476460754601,0,0,0,0,0,0,0,0,0.135904206073614,0.209205692624666,0.305994652908965,0,0,0,0,1.28929632425987,0.262887354279314,0.558564802544508,0,0.717873024576814,0.399358000997982,0,0.223171457441873,0,5.40449825313605,0,0.157566364614447,0.0824158583811665,0,0.0984274815147488,0,0,0,0.160753148465019,0,0,0,0,0,0,0.0788057072991982,0.157363764404994,0.105600336519406,0,0.383830394638891,0,0,0,0,0.864221491201268,0.326587360109409,0,0,3.23737241392301,0.113312091520126,0,0,0,0,0,0,0.427149650270779,0.157204305099666,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0.233713309847224,0,0.757612021100357,0,0,0,0.302461847526478,0,1.03498604992744,0.477890301491107,0,0.310525913752519,0,1.59505028734797,4.17396049449387,0.300515217994437,1.14241563650639,0,0,0,0.464033759878494,1.99047944349308,4.80033317595784,0.343395705182793,0.673498977531838,0,0,0,0.260994291965212,2.04035332961045,0.231522474323834,0.489473409012935,0.358177682162975,0,0,0,0,0,0,0.690860683462397,0,0,0,0,0,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90802610392051,0,0,0.705351887381368,2.4499638188256,0.0642292250964595,0,0,0,0.252071696221718,0,0,0,0,0,0.183428598521679,0.693153996902029,1.1441462864015,0,0,0.150420656698515,0,0,0,1.80149109261106,0,0,0,0,0,0,0.548257766857182,0,0,0.127762427639595,0,0,0,0,0.177404740325278,0,0.342976018874837,0.0679697329768317,0,0,0.111231401892069,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0.860454717640555,0,0,0.423387050190929,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,4.92788632594669,0.0939839179798536,0.128915775947154,0,0,0,0.0802413666891683,0,0.458729283404541,0,0,0,0.436350690340377,0,4.46394021800102,1.38652688589425,2.59575937274273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33639558774184,0,0,0,0,0,0.143444410785353,0.332660356546013,0.0814032686109745,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p31@THBS1 | |||
}} |
Latest revision as of 11:26, 17 September 2015
Short description: | p31@THBS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_31_at_THBS1_5end |
Coexpression cluster: | C142_Preadipocyte_Fibroblast_hepatic_Ewing_Adipocyte_Olfactory_Hair |
Association with transcript: | 88bp_to_ENST00000559746_5end |
EntrezGene: | THBS1 |
HGNC: | 11785 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.06e-19 | 76 |
skin fibroblast | 2.15e-13 | 23 |
preadipocyte | 7.78e-09 | 12 |
multi fate stem cell | 1.20e-07 | 427 |
somatic stem cell | 2.81e-07 | 433 |
preadipocyte of the breast | 4.42e-07 | 3 |
stem cell | 8.36e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
skin of body | 4.09e-12 | 41 |
omentum | 1.85e-11 | 6 |
peritoneum | 1.85e-11 | 6 |
abdominal cavity | 1.85e-11 | 6 |
visceral peritoneum | 1.85e-11 | 6 |
integument | 2.48e-11 | 46 |
integumental system | 2.48e-11 | 46 |
somatic layer of lateral plate mesoderm | 1.39e-09 | 8 |
amnion | 2.64e-08 | 7 |
organ component layer | 6.10e-08 | 66 |
extraembryonic membrane | 7.96e-08 | 14 |
membranous layer | 7.96e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.02e-09 | 5 |
myotonic disease | 2.02e-09 | 5 |
muscle tissue disease | 2.02e-09 | 5 |
myopathy | 2.02e-09 | 5 |
muscular disease | 2.02e-09 | 5 |
myotonic dystrophy | 2.02e-09 | 5 |