FFCP PHASE1:Hg19::chr13:45768886..45768895,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr13:45768886..45768895,-
|short_description=p6@KCTD4
|description=CAGE_peak_6_at_KCTD4_5end
|association_with_transcript=-34bp_to_ENST00000379108_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=386618 | |EntrezGene=386618 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23227 | |HGNC=23227 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WVF5 | |UniProt=Q8WVF5 | ||
|association_with_transcript=-34bp_to_ENST00000379108_5end | |||
|cluster_id=chr13:45768886..45768895,- | |||
|description=CAGE_peak_6_at_KCTD4_5end | |||
|id=chr13:45768886..45768895,- | |||
|ontology_enrichment_celltype=CL:0002166!1.42e-13!3;CL:0000077!3.53e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0002166;1.47e-30;3!CL:0000346;1.35e-08;3!CL:1000428;1.35e-08;3!CL:0002159;2.52e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,1.47e-30,3;CL:0000346,1.40e-08,3;CL:1000428,1.40e-08,3;CL:0002159,2.52e-07,14 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.35e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!7.57e-23!32;UBERON:0001893!2.43e-21!34;UBERON:0002791!3.22e-19!33;UBERON:0002020!1.41e-18!34;UBERON:0003528!1.41e-18!34;UBERON:0002780!3.36e-17!41;UBERON:0001890!3.36e-17!41;UBERON:0006240!3.36e-17!41;UBERON:0003080!1.02e-16!42;UBERON:0000956!1.26e-15!25;UBERON:0000203!1.26e-15!25;UBERON:0000955!5.45e-15!69;UBERON:0006238!5.45e-15!69;UBERON:0000033!9.90e-15!123;UBERON:0005743!3.16e-14!86;UBERON:0000073!6.79e-14!94;UBERON:0001016!6.79e-14!94;UBERON:0000153!9.01e-14!129;UBERON:0007811!9.01e-14!129;UBERON:0001017!1.86e-13!82;UBERON:0001950!2.47e-13!20;UBERON:0001049!3.38e-13!57;UBERON:0005068!3.38e-13!57;UBERON:0006241!3.38e-13!57;UBERON:0007135!3.38e-13!57;UBERON:0002616!1.23e-12!59;UBERON:0001871!2.12e-12!7;UBERON:0003056!2.92e-12!61;UBERON:0002771!3.62e-12!3;UBERON:0002619!4.94e-12!22;UBERON:0003075!1.83e-11!86;UBERON:0007284!1.83e-11!86;UBERON:0002420!2.05e-11!9;UBERON:0007245!2.05e-11!9;UBERON:0010009!2.05e-11!9;UBERON:0010011!2.05e-11!9;UBERON:0000454!2.05e-11!9;UBERON:0004121!5.87e-11!169;UBERON:0002346!9.07e-11!90;UBERON:0000924!1.46e-10!173;UBERON:0006601!1.46e-10!173;UBERON:0001708!2.79e-10!4;UBERON:0001704!2.79e-10!4;UBERON:0000200!2.91e-10!6;UBERON:0000369!7.99e-10!4;UBERON:0002435!7.99e-10!4;UBERON:0000204!7.99e-10!4;UBERON:0010082!7.99e-10!4;UBERON:0001876!1.36e-09!2;UBERON:0003129!4.52e-09!11;UBERON:0000349!4.43e-08!5;UBERON:0000075!1.27e-07!13;UBERON:0005944!1.27e-07!13;UBERON:0004288!1.27e-07!13;UBERON:0003089!1.27e-07!13;UBERON:0002090!5.70e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001708;3.29e-23;4!UBERON:0008895;3.29e-23;4!UBERON:0011159;8.66e-19;5!UBERON:0001876;1.65e-12;2!UBERON:0011137;4.43e-09;11!UBERON:0010323;4.43e-09;11!UBERON:0000412;1.35e-08;3!UBERON:0001992;1.35e-08;3!UBERON:0004765;2.55e-08;26 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,3.29e-23,4;UBERON:0008895,3.29e-23,4;UBERON:0011159,8.66e-19,5;UBERON:0010188,7.79e-16,6;UBERON:0002539,7.79e-16,6;UBERON:0008816,7.79e-16,6;UBERON:0001876,1.65e-12,2;UBERON:0010323,4.43e-09,11;UBERON:0000412,1.40e-08,3;UBERON:0001992,1.40e-08,3;UBERON:0011137,2.52e-07,14 | |||
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| ||
|short_description=p6@KCTD4 | |||
}} | }} |
Latest revision as of 11:47, 17 September 2015
Short description: | p6@KCTD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_KCTD4_5end |
Coexpression cluster: | NA |
Association with transcript: | -34bp_to_ENST00000379108_5end |
EntrezGene: | KCTD4 |
HGNC: | 23227 |
UniProt: | Q8WVF5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 1.47e-30 | 3 |
hair follicle dermal papilla cell | 1.40e-08 | 3 |
stem cell of epidermis | 1.40e-08 | 3 |
general ecto-epithelial cell | 2.52e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
jaw skeleton | 3.29e-23 | 4 |
splanchnocranium | 3.29e-23 | 4 |
primary subdivision of cranial skeletal system | 8.66e-19 | 5 |
protuberance | 7.79e-16 | 6 |
pharyngeal arch | 7.79e-16 | 6 |
embryonic head | 7.79e-16 | 6 |
amygdala | 1.65e-12 | 2 |
cranial skeletal system | 4.43e-09 | 11 |
dermal papilla | 1.40e-08 | 3 |
papillary layer of dermis | 1.40e-08 | 3 |
axial skeletal system | 2.52e-07 | 14 |