FFCP PHASE1:Hg19::chr13:45775162..45775191,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=386618 | |EntrezGene=386618 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23227 | |HGNC=23227 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WVF5 | |UniProt=Q8WVF5 | ||
|association_with_transcript=0bp_to_ENST00000405872,NM_198404,uc001uzx.3_5end | |association_with_transcript=0bp_to_ENST00000405872,NM_198404,uc001uzx.3_5end | ||
|cluster_id=chr13:45775162..45775191,- | |||
|description=CAGE_peak_2_at_KCTD4_5end | |description=CAGE_peak_2_at_KCTD4_5end | ||
|id=chr13:45775162..45775191,- | |id=chr13:45775162..45775191,- | ||
|ontology_enrichment_celltype=CL:0000359!3.15e-20!32;CL:0000055!2.43e-15!180;CL:0000192!1.63e-13!42;CL:0000514!1.63e-13!42;CL:0000057!5.39e-11!75;CL:0002620!1.41e-10!23;CL:0000144!3.26e-10!625;CL:0000680!7.73e-10!57;CL:0000056!7.73e-10!57;CL:0000355!7.73e-10!57;CL:0002539!4.96e-09!10;CL:0000187!6.75e-09!54;CL:0000548!1.78e-08!679;CL:0000004!1.78e-08!679;CL:0000255!1.78e-08!679;CL:0000220!1.91e-08!246;CL:0002371!2.47e-08!591;CL:0000012!2.87e-08!682;CL:0002321!3.06e-08!248;CL:0000183!1.42e-07!59;CL:0000222!1.44e-07!119;CL:0000393!2.43e-07!60;CL:0000211!2.43e-07!60;CL:0002559!3.33e-07!4 | |ontology_enrichment_celltype=CL:0000359!3.15e-20!32;CL:0000055!2.43e-15!180;CL:0000192!1.63e-13!42;CL:0000514!1.63e-13!42;CL:0000057!5.39e-11!75;CL:0002620!1.41e-10!23;CL:0000144!3.26e-10!625;CL:0000680!7.73e-10!57;CL:0000056!7.73e-10!57;CL:0000355!7.73e-10!57;CL:0002539!4.96e-09!10;CL:0000187!6.75e-09!54;CL:0000548!1.78e-08!679;CL:0000004!1.78e-08!679;CL:0000255!1.78e-08!679;CL:0000220!1.91e-08!246;CL:0002371!2.47e-08!591;CL:0000012!2.87e-08!682;CL:0002321!3.06e-08!248;CL:0000183!1.42e-07!59;CL:0000222!1.44e-07!119;CL:0000393!2.43e-07!60;CL:0000211!2.43e-07!60;CL:0002559!3.33e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000359;6.43e-20;32!CL:0002539;3.44e-11;10!CL:0002559;9.60e-11;5!CL:0000192;1.12e-10;43!CL:0000346;1.16e-10;3!CL:1000428;1.16e-10;3!CL:0002595;2.36e-10;5!CL:0002621;3.60e-10;3!CL:0002594;9.28e-08;4!CL:0002593;4.36e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,3.83e-21,32;CL:0000192,1.08e-14,43;CL:0000514,1.08e-14,43;CL:0002321,3.77e-12,250;CL:0000680,2.52e-11,58;CL:0000056,2.52e-11,58;CL:0000355,2.52e-11,58;CL:0002539,3.27e-11,10;CL:0002559,7.06e-11,5;CL:0000346,9.45e-11,3;CL:1000428,9.45e-11,3;CL:0000187,1.24e-10,55;CL:0002595,1.95e-10,5;CL:0002621,3.56e-10,3;CL:0000222,1.27e-09,121;CL:0000393,3.25e-09,61;CL:0000211,3.25e-09,61;CL:0002594,8.99e-08,4;CL:0002593,3.74e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000514;1.12e-10;43 | |||
|ontology_enrichment_disease=DOID:2394!9.96e-08!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000486!2.96e-16!82;UBERON:0000914!9.10e-15!83;UBERON:0002329!9.10e-15!83;UBERON:0003077!9.10e-15!83;UBERON:0003059!9.10e-15!83;UBERON:0007282!9.10e-15!83;UBERON:0009618!9.10e-15!83;UBERON:0007285!9.10e-15!83;UBERON:0004290!1.07e-13!70;UBERON:0002097!2.02e-13!40;UBERON:0002199!3.65e-13!45;UBERON:0002416!3.65e-13!45;UBERON:0001637!1.27e-12!42;UBERON:0003509!1.27e-12!42;UBERON:0004572!1.27e-12!42;UBERON:0004573!1.44e-11!33;UBERON:0004571!1.44e-11!33;UBERON:0001981!4.25e-09!60;UBERON:0007500!4.25e-09!60;UBERON:0004537!4.25e-09!60;UBERON:0006965!4.25e-09!60;UBERON:0004237!4.96e-09!10;UBERON:0004695!4.96e-09!10;UBERON:0002111!4.96e-09!10;UBERON:0004178!4.96e-09!10;UBERON:0004872!6.01e-09!84;UBERON:0003102!9.05e-09!95;UBERON:0001134!1.05e-08!61;UBERON:0002036!1.05e-08!61;UBERON:0003082!1.05e-08!61;UBERON:0002067!1.09e-08!9;UBERON:0004016!1.09e-08!9;UBERON:0010083!1.09e-08!9;UBERON:0005256!1.45e-08!143;UBERON:0002385!3.37e-08!63;UBERON:0001015!3.37e-08!63;UBERON:0000383!3.37e-08!63;UBERON:0000055!1.22e-07!69;UBERON:0002073!3.33e-07!4;UBERON:0005086!3.33e-07!4;UBERON:0002049!5.56e-07!79;UBERON:0007798!5.56e-07!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;8.95e-14;33!UBERON:0004571;8.95e-14;33!UBERON:0001637;1.08e-12;42!UBERON:0003509;1.08e-12;42!UBERON:0004572;1.08e-12;42!UBERON:0004237;3.44e-11;10!UBERON:0004695;3.44e-11;10!UBERON:0002111;3.44e-11;10!UBERON:0004178;3.44e-11;10!UBERON:0002073;9.60e-11;5!UBERON:0000412;1.16e-10;3!UBERON:0001992;1.16e-10;3!UBERON:0002097;2.03e-10;41!UBERON:0003834;2.36e-10;5!UBERON:0001533;2.36e-10;5!UBERON:0001949;3.60e-10;3!UBERON:0001310;9.28e-08;4!UBERON:0003513;2.17e-07;7!UBERON:0001135;3.34e-07;15!UBERON:0002456;4.36e-07;2!UBERON:0001003;6.40e-07;15!UBERON:0007376;6.40e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,2.77e-17,42;UBERON:0003509,2.77e-17,42;UBERON:0004572,2.77e-17,42;UBERON:0000486,1.49e-15,83;UBERON:0004573,3.04e-15,33;UBERON:0004571,3.04e-15,33;UBERON:0002329,1.32e-12,71;UBERON:0003059,1.32e-12,71;UBERON:0007282,1.32e-12,71;UBERON:0004290,1.32e-12,71;UBERON:0009618,1.32e-12,71;UBERON:0003077,2.33e-12,72;UBERON:0007285,2.33e-12,72;UBERON:0007524,4.03e-12,73;UBERON:0004237,3.27e-11,10;UBERON:0004695,3.27e-11,10;UBERON:0002111,3.27e-11,10;UBERON:0004178,3.27e-11,10;UBERON:0007500,4.44e-11,59;UBERON:0001981,4.44e-11,59;UBERON:0004537,4.44e-11,59;UBERON:0006965,4.44e-11,59;UBERON:0007503,5.02e-11,78;UBERON:0002097,5.14e-11,41;UBERON:0002073,7.06e-11,5;UBERON:0005086,7.06e-11,5;UBERON:0000412,9.45e-11,3;UBERON:0001992,9.45e-11,3;UBERON:0003834,1.95e-10,5;UBERON:0001533,1.95e-10,5;UBERON:0001134,2.50e-10,62;UBERON:0002036,2.50e-10,62;UBERON:0003082,2.50e-10,62;UBERON:0001949,3.56e-10,3;UBERON:0002385,7.03e-10,64;UBERON:0001015,7.03e-10,64;UBERON:0000383,7.03e-10,64;UBERON:0004872,9.46e-10,83;UBERON:0002199,1.78e-09,46;UBERON:0002416,1.78e-09,46;UBERON:0003102,3.72e-09,99;UBERON:0000055,4.47e-09,68;UBERON:0001310,8.99e-08,4;UBERON:0005256,1.03e-07,122;UBERON:0003513,1.90e-07,7;UBERON:0002049,2.06e-07,78;UBERON:0007798,2.06e-07,78;UBERON:0001135,3.24e-07,15;UBERON:0002456,3.74e-07,2;UBERON:0001003,5.51e-07,15;UBERON:0007376,5.51e-07,15;UBERON:0007383,5.51e-07,15;UBERON:0004871,9.92e-07,8 | |||
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|short_description=p2@KCTD4 | |short_description=p2@KCTD4 | ||
}} | }} |
Latest revision as of 11:51, 17 September 2015
Short description: | p2@KCTD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KCTD4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000405872, NM_198404, uc001uzx.3_5end |
EntrezGene: | KCTD4 |
HGNC: | 23227 |
UniProt: | Q8WVF5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 3.83e-21 | 32 |
smooth muscle cell | 1.08e-14 | 43 |
smooth muscle myoblast | 1.08e-14 | 43 |
embryonic cell | 3.77e-12 | 250 |
muscle precursor cell | 2.52e-11 | 58 |
myoblast | 2.52e-11 | 58 |
multi-potent skeletal muscle stem cell | 2.52e-11 | 58 |
aortic smooth muscle cell | 3.27e-11 | 10 |
hair follicle cell | 7.06e-11 | 5 |
hair follicle dermal papilla cell | 9.45e-11 | 3 |
stem cell of epidermis | 9.45e-11 | 3 |
muscle cell | 1.24e-10 | 55 |
smooth muscle cell of the subclavian artery | 1.95e-10 | 5 |
gingival epithelial cell | 3.56e-10 | 3 |
mesodermal cell | 1.27e-09 | 121 |
electrically responsive cell | 3.25e-09 | 61 |
electrically active cell | 3.25e-09 | 61 |
smooth muscle cell of the umbilical artery | 8.99e-08 | 4 |
smooth muscle cell of the internal thoracic artery | 3.74e-07 | 2 |