FFCP PHASE1:Hg19::chr1:155225304..155225307,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10712 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1233 | |||
|TSSclassifier=strong | |||
|UniProt=E9PDD8,P81408,Q96AD8,Q96H71 | |||
|association_with_transcript=-30bp_to_ENST00000323361,ENST00000481822,NM_006589,NM_198264,uc001fjm.2,uc001fjn.2,uc001fjo.2,uc001fjp.2,uc001fjq.1_5end | |||
|cluster_id=chr1:155225304..155225307,- | |||
|description=CAGE_peak_15_at_FAM189B_5end | |||
|id=chr1:155225304..155225307,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000346;8.69e-18;3!CL:1000428;8.69e-18;3!CL:0000306;1.06e-13;4!CL:0002222;1.06e-13;4!CL:0002224;1.06e-13;4!CL:0002559;3.10e-11;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,9.46e-18,3;CL:1000428,9.46e-18,3;CL:0000306,1.00e-13,4;CL:0002222,1.00e-13,4;CL:0002224,1.00e-13,4;CL:0002559,3.26e-11,5 | |||
|ontology_enrichment_development_v019=UBERON:0009117;8.54e-21;10!UBERON:0005564;8.54e-21;10 | |||
|ontology_enrichment_disease=DOID:1325!4.92e-08!7;DOID:3904!4.92e-08!7 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.11e-25;8!UBERON:0003135;5.14e-19;11!UBERON:0000412;8.69e-18;3!UBERON:0001992;8.69e-18;3!UBERON:0010077;1.06e-13;4!UBERON:0005389;1.06e-13;4!UBERON:0000484;1.06e-13;4!UBERON:0000965;1.06e-13;4!UBERON:0001803;1.06e-13;4!UBERON:0002073;3.10e-11;5!UBERON:0000991;1.69e-10;21!UBERON:0003101;4.53e-10;22!UBERON:0000079;4.53e-10;22!UBERON:0002067;8.14e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.11e-25,8;UBERON:0003135,5.14e-19,11;UBERON:0000412,9.46e-18,3;UBERON:0001992,9.46e-18,3;UBERON:0010077,1.00e-13,4;UBERON:0005389,1.00e-13,4;UBERON:0000484,1.00e-13,4;UBERON:0002546,1.00e-13,4;UBERON:0000965,1.00e-13,4;UBERON:0001803,1.00e-13,4;UBERON:0003073,1.00e-13,4;UBERON:0005426,1.00e-13,4;UBERON:0002073,3.26e-11,5;UBERON:0005086,3.26e-11,5;UBERON:0000991,1.69e-10,21;UBERON:0009196,1.69e-10,21;UBERON:0009117,1.69e-10,21;UBERON:0005564,1.69e-10,21;UBERON:0004176,4.53e-10,22;UBERON:0003101,4.53e-10,22;UBERON:0000079,4.53e-10,22;UBERON:0000076,1.59e-07,8;UBERON:0005085,1.92e-07,31;UBERON:0002067,8.37e-07,9;UBERON:0004016,8.37e-07,9;UBERON:0010083,8.37e-07,9 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0.154934401160603,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.589405839739707,0,0.741568885568859,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0.211931901159562,0,0.103052529238439,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0.121973706129595,0,0.232387885739037,0.207322110030741,0,0.36497735907583,0,0,1.38134921352481,0,0,0.118306800039844,0.168584690078102,0,0,0,0,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0.0925884451585296,0,0,1.44331342025273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0.270946437543853,0,0.764628819135115,0.831076008928724,0.671624264166535,0,0,0,0,0,0.103041011647722,0,0.165018999841176,0,0,0,0,0,0.307007349452259,0.137836572484531,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0.28853842595289,0,0.159426272728822,0.399158742865633,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0.166849141711909,0,0.278406173895242,0,0,0.33307196799782,0,0,0,0.728163130497081,0,0.284136146806413,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.1137934482855,0.254253650292766,0.236387681767936,0,0,0,0,0.241192877250816,0,0.110579259931225,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0.313932918407225,0,0,0,0,0.0979923974143777,0,0,0,0.0967563312890851,0.146178634172371,0,0.193978032976839,0,0,0,0.19871461170299,0.0633107959558787,0,0.160317640503067,0,0,0,0.114536596165916,0,0,0,0.235694034616795,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0.197611631897944,0,0.638341257770182,0,0.2506898940227,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0,0,0,0,0,0,0.468334905806882,0.144921028610825,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0.6124909547064,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,0.0887023701626388,0,0,0,0,0.118193840883968,0.111231401892069,0,0,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0.118920090777569,0.22589216407792,0,0.150962843566674,0,0,0,0,0,0,0,0.4226557275834,0,0.187967835959707,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0.436350690340377,0,0,0,0,0,0.109265571963696,0,0.101988829741982,0,0,0,1.21245917149183,1.87574891109325,0.829169439458779,0,0,0,0,0.0620747142958579,0,0.0636471582781649,0.202117188958219,0,0,0,0,0,0.0814032686109745,0,0,0.179650404213174,0,0.244482888365733,0,0,0.201273793591026,0 | |||
|short_description=p15@FAM189B | |||
}} |
Latest revision as of 12:05, 17 September 2015
Short description: | p15@FAM189B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_FAM189B_5end |
Coexpression cluster: | NA |
Association with transcript: | -30bp_to_ENST00000323361, ENST00000481822, NM_006589, NM_198264, uc001fjm.2, uc001fjn.2, uc001fjo.2, uc001fjp.2, uc001fjq.1_5end |
EntrezGene: | FAM189B |
HGNC: | 1233 |
UniProt: | E9PDD8P81408Q96AD8Q96H71 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 9.46e-18 | 3 |
stem cell of epidermis | 9.46e-18 | 3 |
crystallin accumulating cell | 1.00e-13 | 4 |
vertebrate lens cell | 1.00e-13 | 4 |
lens epithelial cell | 1.00e-13 | 4 |
hair follicle cell | 3.26e-11 | 5 |
Ontology term | p-value | n |
---|---|---|
testis | 1.11e-25 | 8 |
male reproductive organ | 5.14e-19 | 11 |
dermal papilla | 9.46e-18 | 3 |
papillary layer of dermis | 9.46e-18 | 3 |
cuboidal epithelium | 1.00e-13 | 4 |
transparent eye structure | 1.00e-13 | 4 |
simple cuboidal epithelium | 1.00e-13 | 4 |
cranial placode | 1.00e-13 | 4 |
lens of camera-type eye | 1.00e-13 | 4 |
epithelium of lens | 1.00e-13 | 4 |
lens placode | 1.00e-13 | 4 |
lens vesicle | 1.00e-13 | 4 |
hair follicle | 3.26e-11 | 5 |
hair follicle placode | 3.26e-11 | 5 |
gonad | 1.69e-10 | 21 |
indifferent external genitalia | 1.69e-10 | 21 |
indifferent gonad | 1.69e-10 | 21 |
gonad primordium | 1.69e-10 | 21 |
external genitalia | 4.53e-10 | 22 |
male organism | 4.53e-10 | 22 |
male reproductive system | 4.53e-10 | 22 |
external ectoderm | 1.59e-07 | 8 |
ectodermal placode | 1.92e-07 | 31 |
dermis | 8.37e-07 | 9 |
dermatome | 8.37e-07 | 9 |
future dermis | 8.37e-07 | 9 |