FFCP PHASE1:Hg19::chr11:27494279..27494308,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55366 | |EntrezGene=55366 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13299 | |HGNC=13299 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BXB1 | |UniProt=Q9BXB1 | ||
|association_with_transcript=0bp_to_ENST00000379214_5end | |association_with_transcript=0bp_to_ENST00000379214_5end | ||
|cluster_id=chr11:27494279..27494308,- | |||
|coexpression_cluster_id=C2125 | |||
|description=CAGE_peak_3_at_LGR4_5end | |description=CAGE_peak_3_at_LGR4_5end | ||
|id=chr11:27494279..27494308,- | |id=chr11:27494279..27494308,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003104;1.03e-07;31 | |||
|ontology_enrichment_disease=DOID:0050687!4.89e-08!143 | |ontology_enrichment_disease=DOID:0050687!4.89e-08!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:193,7.71e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0000481!9.39e-11!347;UBERON:0000062!1.78e-10!511;UBERON:0000468!1.85e-10!659;UBERON:0001048!2.06e-09!168;UBERON:0000467!2.29e-08!625;UBERON:0003133!3.45e-08!48;UBERON:0000480!3.67e-08!626;UBERON:0002553!5.82e-08!70;UBERON:0000466!8.25e-08!126;UBERON:0004176!1.02e-07!22;UBERON:0000991!1.05e-07!21;UBERON:0009196!1.05e-07!21;UBERON:0009117!1.05e-07!21;UBERON:0005564!1.05e-07!21;UBERON:0000922!2.20e-07!612;UBERON:0005156!3.28e-07!59;UBERON:0000990!3.28e-07!59;UBERON:0003104!8.61e-07!238;UBERON:0009142!8.61e-07!238;UBERON:0003886!8.72e-07!63;UBERON:0003103!9.55e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0000991;2.09e-09;21!UBERON:0003133;3.13e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004176,2.04e-09,22;UBERON:0000991,2.17e-09,21;UBERON:0009196,2.17e-09,21;UBERON:0009117,2.17e-09,21;UBERON:0005564,2.17e-09,21;UBERON:0001048,3.09e-09,160;UBERON:0003133,5.83e-09,48;UBERON:0005156,1.64e-07,59;UBERON:0000990,1.64e-07,59 | |||
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|phase1_expression=0.54503513781167,0.642301571672949,0.422863212287913,2.00146596706261,0.893922188854576,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0.247532705920093,0.994192127183747,0.672325146451775,0,0.730310090387373,0.975865597581014,0.369363174230364,1.02000345622126,0.940364164434263,2.0036519099174,0.684372125364421,0.502170558379211,0,0.0821005894499457,0,0,0,0.154816123316076,0,0.90361775633475,0.739508020333575,0,0,0,0,0,0,0.223915474239924,0.32389366601898,0.257575567634187,0.290796477559129,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0.188242339542605,0,0,0,0.320929027076094,0,0,0,0.426224750532694,0.290209238628584,0,0,0,0.521482918420201,0,1.21079900526674,0,0.316462387440884,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0.426730222566507,0,0.574752439954483,0.661044872784862,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,2.01210257911091,0.767175371061182,1.44575660953827,1.00267582127178,0.434539556882471,0.795285947051099,0.486634870302636,14.7474314775946,13.747222642679,18.796644138329,2.5540919722054,0.364295288292542,0,1.29818957461873,1.91542711029194,1.06366368415092,0,0,0,0.198762407366705,0,0.347140501607594,1.13061588384802,0,0,0.835979866147242,0.516833518338658,0.35576626268671,0,0,0,0,0,0,0.267899184852239,0.673588117878509,0.112611480483322,0,0,0.183201743930407,0,0,1.3082821564276,0.993943903390637,1.39293562831038,1.72131935057184,1.72101972449288,1.41867352879343,0,1.06748995729705,2.96001058100592,1.55605517699883,0.538842688278752,0.817309515567294,0.908144565869588,1.15235184896,0.234321431833797,0.936480230490962,1.1409436430889,0,0,1.13311061057692,0.561803226808994,0,1.35117749042945,0.309977343527296,0,0.494533858557114,0,0,0.336672227908132,0.750711119231785,0,0.877955241761676,0,0.150238058906597,1.58805056424029,2.51145489964407,1.70845911054854,1.27159140695737,1.50045548042201,0.824420233907511,1.03056216018252,0.558350568994769,6.07594796068558,3.70260619612555,2.01947019395292,1.38074847963449,1.2931684545505,3.55009592516614,1.91428986632517,0.339121184620975,1.54608682530637,2.18196896472668,3.15485054927904,2.80539524098069,5.96383957446684,2.44007280025989,2.38420426535352,1.7662459561294,5.83963774521328,3.12899064659632,2.57296375277154,0,0,0,0.828147600278907,1.51726221070292,0.482022059766964,0.992645754591546,1.08939722046203,1.42362371466658,0.808987848960987,1.37355025587742,0.769494313892781,0,1.40241773803446,0.8231480226628,0,10.1404027857465,7.86261773342101,4.72631925345123,0,3.32068784066407,1.71567810298526,2.74375713521564,0,1.00528972411631,0.648119116109707,0,0,4.3299402607582,17.2736303412864,11.3886433408747,0.144366447761074,0,0,3.1608175918371,0,0.492434012174795,0.468008530278475,0.297262324577456,1.87467667973554,1.84780341018745,1.55952606966625,0.716468181622786,0.290633938513962,1.53353071666084,0,0,0,0,0.12624243342638,0.063497894292169,0,1.17217447210047,0,0.205654985406647,0,0.857479297891735,0.784917590417525,0.43596006883328,0.5867062865676,0.646358578788889,0,0.845302752556,0.531876233169741,0,0,0,0,0.428933980974443,0,0,0,0.355391948742546,0,0.602878754119172,0.871533458600294,0.599837947092342,0,0,0,5.5113716763064,1.14861935834114,0,0.289562613335158,0,0.179060963239896,0,0,0,0.385029108839245,0.508189248444927,0,0.773288812777695,0.167516265334349,0,0,0,0,0.36807447515742,1.00034104211935,0.271265023699736,0.831883446123229,0.892144943985809,0.315404830067869,0.585707074963566,0.300946099727719,0,2.0694614258501,6.64225598535437,5.53107505625109,0.347534457872331,0.587403472388222,0.686286847621712,0.206768026122887,0,0,0.303127571446259,0,0.30239029332968,0,0.61384789315225,0,0.256278298511402,1.02341449813341,0.482561763430822,0,0.308419387605311,0.710246901252508,0.657017248110473,0,0.464841513839837,3.02148623979056,1.20303882181971,0.460404944679482,0.229628896329213,0.182091168006717,0,1.35359883872224,2.46449078734127,1.56869953835371,2.92278449306521,3.9054102690364,1.13733384070897,0,1.51141141271498,0,0.812839312631559,1.00337954770971,2.80363900349542,0.831076008928724,2.68649705666614,0.438519753291869,0,0.512900250232778,0.328014645699706,0.325378394664303,5.46117361732928,1.64825036673018,1.15513299888823,0,0.650060246036521,1.6068392984416,0.580024309752732,0.154048617114644,0.460511024178389,0,0.214840489736547,0.145016693914229,0.596586391912706,6.14321045962488,1.15699440752685,0.576570202095319,2.04180339991335,1.11273558941105,0,0.31481234683064,1.3940745403212,2.46426864140871,2.66153015158511,1.73986598415015,1.48259375283136,2.71937284809783,0,1.58189712359363,1.14378116354295,0,0.855877976067841,1.27281299170375,0.78494864019923,0.539617372749944,0,0.471249609382746,0.808729926293264,0,2.10629228119491,0.48763373908959,2.68084838594413,0,0.136499911407986,0.282810863907425,2.26016233240486,1.65409603063837,3.3171948762061,2.19225442626881,0,0.655894752046633,1.42037263873893,1.239293992399,0.845086807596724,0.71705676102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| ||
|short_description=p3@LGR4 | |short_description=p3@LGR4 | ||
}} | }} |
Latest revision as of 12:10, 17 September 2015
Short description: | p3@LGR4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LGR4_5end |
Coexpression cluster: | C2125_gastric_signet_Lens_Ciliary_lung_Hepatocyte_kidney |
Association with transcript: | 0bp_to_ENST00000379214_5end |
EntrezGene: | LGR4 |
HGNC: | 13299 |
UniProt: | Q9BXB1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
external genitalia | 2.04e-09 | 22 |
gonad | 2.17e-09 | 21 |
indifferent external genitalia | 2.17e-09 | 21 |
indifferent gonad | 2.17e-09 | 21 |
gonad primordium | 2.17e-09 | 21 |
primordium | 3.09e-09 | 160 |
reproductive organ | 5.83e-09 | 48 |
reproductive structure | 1.64e-07 | 59 |
reproductive system | 1.64e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
reproductive organ cancer | 7.71e-07 | 29 |