FFCP PHASE1:Hg19::chr1:155271191..155271202,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5313 | |EntrezGene=5313 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9020 | |HGNC=9020 | ||
|TSSclassifier=strong | |||
|UniProt=P30613,E7ESY9 | |UniProt=P30613,E7ESY9 | ||
|association_with_transcript=22bp_to_ENST00000342741,ENST00000423816,NM_000298,uc001fkb.3_5end | |||
|cluster_id=chr1:155271191..155271202,- | |||
|coexpression_cluster_id=C93 | |||
|description=CAGE_peak_4_at_PKLR_5end | |||
|id=chr1:155271191..155271202,- | |||
|ontology_enrichment_celltype=CL:0000764!1.99e-23!2;CL:0000765!1.99e-23!2;CL:0000050!1.99e-23!2;CL:0000038!1.99e-23!2;CL:0000558!1.99e-23!2;CL:0000547!1.99e-23!2;CL:0000549!1.99e-23!2;CL:0000550!1.99e-23!2;CL:0000552!1.99e-23!2;CL:0000763!1.45e-12!112;CL:0000049!1.45e-12!112;CL:0002032!5.38e-08!165;CL:0000837!5.38e-08!165;CL:0000037!1.34e-07!172;CL:0000566!1.34e-07!172;CL:0000988!4.36e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000764;6.00e-34;2!CL:0000558;6.00e-34;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,6.00e-34,2;CL:0000765,6.00e-34,2;CL:0000050,6.00e-34,2;CL:0000038,6.00e-34,2;CL:0000558,6.00e-34,2;CL:0000547,6.00e-34,2;CL:0000549,6.00e-34,2;CL:0000550,6.00e-34,2;CL:0000552,6.00e-34,2;CL:0000763,1.95e-14,108;CL:0000049,1.95e-14,108;CL:0002032,1.95e-09,161;CL:0000837,1.95e-09,161;CL:0000037,5.23e-09,168;CL:0000988,1.66e-08,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!3.75e-50!8;DOID:8692!1.21e-34!31;DOID:1240!2.71e-27!39;DOID:2531!1.40e-20!51;DOID:0060083!1.40e-20!51;DOID:8552!9.92e-13!1;DOID:0050686!9.34e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:1036;4.84e-52;8!DOID:8692;6.22e-34;31!DOID:1240;9.92e-23;39!DOID:8552;4.44e-18;1!DOID:2531;8.94e-14;51!DOID:0060083;8.94e-14;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,5.11e-52,8;DOID:8692,1.33e-33,31;DOID:1240,1.24e-26,39;DOID:2531,2.89e-20,51;DOID:0060083,2.89e-20,51;DOID:8552,4.44e-18,1;DOID:0050686,4.05e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0004177!4.43e-07!7 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p4@PKLR | |||
}} | }} |
Latest revision as of 12:20, 17 September 2015
Short description: | p4@PKLR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PKLR_5end |
Coexpression cluster: | C93_chronic_acute_leukemia_acantholytic_medulloblastoma_testis_papillotubular |
Association with transcript: | 22bp_to_ENST00000342741, ENST00000423816, NM_000298, uc001fkb.3_5end |
EntrezGene: | PKLR |
HGNC: | 9020 |
UniProt: | P30613E7ESY9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 6.00e-34 | 2 |
erythroblast | 6.00e-34 | 2 |
megakaryocyte-erythroid progenitor cell | 6.00e-34 | 2 |
erythroid progenitor cell | 6.00e-34 | 2 |
reticulocyte | 6.00e-34 | 2 |
proerythroblast | 6.00e-34 | 2 |
basophilic erythroblast | 6.00e-34 | 2 |
polychromatophilic erythroblast | 6.00e-34 | 2 |
orthochromatic erythroblast | 6.00e-34 | 2 |
myeloid cell | 1.95e-14 | 108 |
common myeloid progenitor | 1.95e-14 | 108 |
hematopoietic oligopotent progenitor cell | 1.95e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.95e-09 | 161 |
hematopoietic stem cell | 5.23e-09 | 168 |
hematopoietic cell | 1.66e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 5.11e-52 | 8 |
myeloid leukemia | 1.33e-33 | 31 |
leukemia | 1.24e-26 | 39 |
hematologic cancer | 2.89e-20 | 51 |
immune system cancer | 2.89e-20 | 51 |
chronic myeloid leukemia | 4.44e-18 | 1 |
organ system cancer | 4.05e-07 | 137 |