FFCP PHASE1:Hg19::chr1:31345380..31345394,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9672 | |EntrezGene=9672 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=10660 | |HGNC=10660 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=41bp_to_AL049426_5end | |association_with_transcript=41bp_to_AL049426_5end | ||
|cluster_id=chr1:31345380..31345394,- | |||
|description=CAGE_peak_3_at_SDC3_5end | |description=CAGE_peak_3_at_SDC3_5end | ||
|id=chr1:31345380..31345394,- | |id=chr1:31345380..31345394,- | ||
|ontology_enrichment_celltype=CL:0000055!2.68e-09!180;CL:0000057!1.69e-07!75 | |ontology_enrichment_celltype=CL:0000055!2.68e-09!180;CL:0000057!1.69e-07!75 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.04e-21!82;UBERON:0005743!5.02e-21!86;UBERON:0003075!1.49e-20!86;UBERON:0007284!1.49e-20!86;UBERON:0001049!1.88e-20!57;UBERON:0005068!1.88e-20!57;UBERON:0006241!1.88e-20!57;UBERON:0007135!1.88e-20!57;UBERON:0004121!1.67e-19!169;UBERON:0002616!9.74e-19!59;UBERON:0000955!2.12e-18!69;UBERON:0006238!2.12e-18!69;UBERON:0002346!2.36e-18!90;UBERON:0000924!4.27e-18!173;UBERON:0006601!4.27e-18!173;UBERON:0000468!9.02e-18!659;UBERON:0000475!2.66e-17!365;UBERON:0000467!4.83e-17!625;UBERON:0000073!6.72e-17!94;UBERON:0001016!6.72e-17!94;UBERON:0000480!9.18e-17!626;UBERON:0002020!4.98e-16!34;UBERON:0003528!4.98e-16!34;UBERON:0001893!1.37e-15!34;UBERON:0002791!1.59e-15!33;UBERON:0000033!1.78e-15!123;UBERON:0000119!2.11e-15!312;UBERON:0000483!2.54e-15!309;UBERON:0001869!3.81e-15!32;UBERON:0002780!2.62e-14!41;UBERON:0001890!2.62e-14!41;UBERON:0006240!2.62e-14!41;UBERON:0003080!2.83e-14!42;UBERON:0000062!3.84e-14!511;UBERON:0000477!4.09e-14!286;UBERON:0003056!7.56e-14!61;UBERON:0000153!1.56e-13!129;UBERON:0007811!1.56e-13!129;UBERON:0000025!2.85e-12!194;UBERON:0000064!4.31e-12!219;UBERON:0004111!7.94e-12!241;UBERON:0000956!9.30e-12!25;UBERON:0000203!9.30e-12!25;UBERON:0000922!5.48e-11!612;UBERON:0002619!1.11e-10!22;UBERON:0002050!1.44e-10!605;UBERON:0005423!1.44e-10!605;UBERON:0000923!3.25e-10!604;UBERON:0005291!3.25e-10!604;UBERON:0006598!3.25e-10!604;UBERON:0002532!3.25e-10!604;UBERON:0000481!4.44e-10!347;UBERON:0001950!1.52e-09!20;UBERON:0007023!3.11e-08!115;UBERON:0003076!1.62e-07!15;UBERON:0003057!1.62e-07!15 | |ontology_enrichment_uberon=UBERON:0001017!1.04e-21!82;UBERON:0005743!5.02e-21!86;UBERON:0003075!1.49e-20!86;UBERON:0007284!1.49e-20!86;UBERON:0001049!1.88e-20!57;UBERON:0005068!1.88e-20!57;UBERON:0006241!1.88e-20!57;UBERON:0007135!1.88e-20!57;UBERON:0004121!1.67e-19!169;UBERON:0002616!9.74e-19!59;UBERON:0000955!2.12e-18!69;UBERON:0006238!2.12e-18!69;UBERON:0002346!2.36e-18!90;UBERON:0000924!4.27e-18!173;UBERON:0006601!4.27e-18!173;UBERON:0000468!9.02e-18!659;UBERON:0000475!2.66e-17!365;UBERON:0000467!4.83e-17!625;UBERON:0000073!6.72e-17!94;UBERON:0001016!6.72e-17!94;UBERON:0000480!9.18e-17!626;UBERON:0002020!4.98e-16!34;UBERON:0003528!4.98e-16!34;UBERON:0001893!1.37e-15!34;UBERON:0002791!1.59e-15!33;UBERON:0000033!1.78e-15!123;UBERON:0000119!2.11e-15!312;UBERON:0000483!2.54e-15!309;UBERON:0001869!3.81e-15!32;UBERON:0002780!2.62e-14!41;UBERON:0001890!2.62e-14!41;UBERON:0006240!2.62e-14!41;UBERON:0003080!2.83e-14!42;UBERON:0000062!3.84e-14!511;UBERON:0000477!4.09e-14!286;UBERON:0003056!7.56e-14!61;UBERON:0000153!1.56e-13!129;UBERON:0007811!1.56e-13!129;UBERON:0000025!2.85e-12!194;UBERON:0000064!4.31e-12!219;UBERON:0004111!7.94e-12!241;UBERON:0000956!9.30e-12!25;UBERON:0000203!9.30e-12!25;UBERON:0000922!5.48e-11!612;UBERON:0002619!1.11e-10!22;UBERON:0002050!1.44e-10!605;UBERON:0005423!1.44e-10!605;UBERON:0000923!3.25e-10!604;UBERON:0005291!3.25e-10!604;UBERON:0006598!3.25e-10!604;UBERON:0002532!3.25e-10!604;UBERON:0000481!4.44e-10!347;UBERON:0001950!1.52e-09!20;UBERON:0007023!3.11e-08!115;UBERON:0003076!1.62e-07!15;UBERON:0003057!1.62e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0002791;2.07e-18;32!UBERON:0003528;3.16e-18;34!UBERON:0002020;3.16e-18;34!UBERON:0001869;2.17e-17;32!UBERON:0001893;3.69e-17;34!UBERON:0000956;3.67e-15;25!UBERON:0000203;3.67e-15;25!UBERON:0002780;7.64e-15;41!UBERON:0001890;7.64e-15;41!UBERON:0000073;1.10e-14;53!UBERON:0002616;1.10e-14;53!UBERON:0002619;1.17e-13;22!UBERON:0001950;6.18e-12;20!UBERON:0000955;8.22e-11;68!UBERON:0001017;1.64e-09;75!UBERON:0001016;2.14e-08;83!UBERON:0002420;5.46e-08;9!UBERON:0007245;5.46e-08;9!UBERON:0010009;5.46e-08;9!UBERON:0010011;5.46e-08;9!UBERON:0000454;5.46e-08;9!UBERON:0000125;8.32e-08;9!UBERON:0002308;8.32e-08;9!UBERON:0009663;9.78e-07;7 | |||
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| ||
|short_description=p3@SDC3 | |short_description=p3@SDC3 | ||
}} | }} |
Latest revision as of 12:38, 17 September 2015
Short description: | p3@SDC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SDC3_5end |
Coexpression cluster: | NA |
Association with transcript: | 41bp_to_AL049426_5end |
EntrezGene: | SDC3 |
HGNC: | 10660 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data