FFCP PHASE1:Hg19::chr1:156052204..156052240,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:156052204..156052240,-
|short_description=p2@MEX3A
|description=CAGE_peak_2_at_MEX3A_5end
|association_with_transcript=-415bp_to_ENST00000532414,NM_0010937...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=92312 | |EntrezGene=92312 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=33482 | |HGNC=33482 | ||
|TSSclassifier=strong | |||
|UniProt=A1L020 | |UniProt=A1L020 | ||
|association_with_transcript=-415bp_to_ENST00000532414,NM_001093725,uc001fnd.3_5end | |||
|cluster_id=chr1:156052204..156052240,- | |||
|description=CAGE_peak_2_at_MEX3A_5end | |||
|id=chr1:156052204..156052240,- | |||
|ontology_enrichment_celltype=CL:0002321!1.93e-19!248;CL:0000220!1.24e-18!246;CL:0002319!6.12e-15!25;CL:0000133!5.57e-14!59;CL:0000221!2.79e-12!71;CL:0000115!5.44e-12!35;CL:0002139!7.85e-12!24;CL:0002078!5.71e-11!44;CL:0000333!2.91e-10!41;CL:0000066!3.93e-10!254;CL:0000071!8.63e-10!18;CL:0002546!8.63e-10!18;CL:0000095!1.02e-09!17;CL:0000123!1.02e-09!17;CL:0000222!1.04e-09!119;CL:0000243!2.76e-08!15;CL:0000125!2.76e-08!15;CL:0000030!2.76e-08!15;CL:0000339!2.76e-08!15;CL:0000213!9.10e-08!57;CL:0000215!9.10e-08!57;CL:0000055!1.66e-07!180;CL:0000047!6.61e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002319;6.98e-25;25!CL:0000095;1.12e-15;17!CL:0000115;3.46e-15;36!CL:0002139;1.30e-14;24!CL:0000243;3.70e-13;15!CL:0000125;3.70e-13;15!CL:0000071;3.67e-12;18!CL:0002078;6.50e-10;45!CL:0000128;1.40e-09;7!CL:0000126;1.40e-09;7!CL:0000127;1.40e-09;7!CL:0000540;6.76e-09;6!CL:0000404;6.76e-09;6!CL:1000449;1.28e-07;15!CL:0000333;1.81e-07;5!CL:0002543;2.26e-07;6!CL:0002321;3.72e-07;15!CL:0000213;4.24e-07;58!CL:0000215;4.24e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,6.02e-25,25;CL:0000133,1.82e-21,59;CL:0000115,5.86e-18,36;CL:0002321,8.64e-17,250;CL:0000095,1.04e-15,17;CL:0000123,1.04e-15,17;CL:0002078,1.94e-15,45;CL:0000221,2.03e-15,72;CL:0002139,1.64e-14,24;CL:0000333,3.26e-14,41;CL:0000243,3.42e-13,15;CL:0000125,3.42e-13,15;CL:0000030,3.42e-13,15;CL:0000339,3.42e-13,15;CL:0000071,3.23e-12,18;CL:0002546,3.23e-12,18;CL:0000047,4.97e-11,8;CL:0000213,1.78e-10,58;CL:0000215,1.78e-10,58;CL:0000128,1.34e-09,7;CL:0000126,1.34e-09,7;CL:0000127,1.34e-09,7;CL:0002453,1.34e-09,7;CL:0000540,6.99e-09,6;CL:0000031,6.99e-09,6;CL:0000404,6.99e-09,6;CL:0000066,1.04e-08,253;CL:1000449,1.11e-07,15;CL:0002543,1.77e-07,6;CL:0000222,7.04e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000339;3.70e-13;15!CL:0002546;3.67e-12;18!CL:0000133;1.47e-10;59!CL:0000031;6.76e-09;6!UBERON:0006238;1.82e-08;10 | |||
|ontology_enrichment_disease=DOID:3095!1.10e-09!22;DOID:2994!1.10e-09!22;DOID:171!4.97e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:3095;2.86e-10;22!DOID:2994;2.86e-10;22!DOID:171;3.16e-08;10!DOID:3093;1.77e-07;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,3.00e-10,22;DOID:2994,3.00e-10,22;DOID:171,3.08e-08,10;DOID:3093,1.59e-07,11 | |||
|ontology_enrichment_uberon=UBERON:0000119!5.80e-13!312;UBERON:0000483!4.05e-12!309;UBERON:0001986!8.63e-10!18;UBERON:0004638!8.63e-10!18;UBERON:0004852!8.63e-10!18;UBERON:0000487!1.52e-09!22;UBERON:0000970!1.32e-08!20;UBERON:0000019!1.49e-08!19;UBERON:0000047!1.49e-08!19;UBERON:0004088!1.49e-08!19;UBERON:0003072!1.49e-08!19;UBERON:0003071!1.49e-08!19;UBERON:0004128!1.49e-08!19;UBERON:0006914!1.50e-08!25;UBERON:0000490!2.28e-08!138;UBERON:0001456!2.84e-08!21;UBERON:0002049!3.35e-08!79;UBERON:0007798!3.35e-08!79;UBERON:0002104!8.64e-08!21;UBERON:0001801!1.22e-07!14;UBERON:0007625!3.84e-07!11;UBERON:0003914!4.44e-07!118;UBERON:0000924!5.98e-07!173;UBERON:0006601!5.98e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.67e-12;18!UBERON:0001986;3.67e-12;18!UBERON:0004852;3.67e-12;18!UBERON:0000487;1.97e-10;22!UBERON:0006914;3.93e-10;25!UBERON:0007625;1.33e-09;11!UBERON:0001456;1.85e-09;21!UBERON:0000019;3.30e-09;19!UBERON:0000047;3.30e-09;19!UBERON:0004088;3.30e-09;19!UBERON:0010230;3.30e-09;19!UBERON:0000970;1.48e-08;20!UBERON:0000490;1.68e-08;33!UBERON:0000489;1.69e-08;29!UBERON:0002113;1.73e-08;24!UBERON:0011143;1.73e-08;24!UBERON:0006554;4.70e-08;30!UBERON:0001008;4.70e-08;30!UBERON:0001801;5.52e-08;14!UBERON:0002104;5.69e-08;21!UBERON:0006555;1.28e-07;15!UBERON:0004819;1.28e-07;15!UBERON:0001285;1.28e-07;15!UBERON:0007684;1.28e-07;15!UBERON:0000013;1.81e-07;5!UBERON:0002410;1.81e-07;5!UBERON:0000353;2.48e-07;15!UBERON:0000020;5.81e-07;23 | |||
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| ||
|short_description=p2@MEX3A | |||
}} | }} |
Latest revision as of 14:38, 17 September 2015
Short description: | p2@MEX3A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MEX3A_5end |
Coexpression cluster: | NA |
Association with transcript: | -415bp_to_ENST00000532414, NM_001093725, uc001fnd.3_5end |
EntrezGene: | MEX3A |
HGNC: | 33482 |
UniProt: | A1L020 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 6.02e-25 | 25 |
neurectodermal cell | 1.82e-21 | 59 |
endothelial cell | 5.86e-18 | 36 |
embryonic cell | 8.64e-17 | 250 |
neuron associated cell | 1.04e-15 | 17 |
neuron associated cell (sensu Vertebrata) | 1.04e-15 | 17 |
meso-epithelial cell | 1.94e-15 | 45 |
ectodermal cell | 2.03e-15 | 72 |
endothelial cell of vascular tree | 1.64e-14 | 24 |
migratory neural crest cell | 3.26e-14 | 41 |
glial cell (sensu Vertebrata) | 3.42e-13 | 15 |
glial cell | 3.42e-13 | 15 |
glioblast | 3.42e-13 | 15 |
glioblast (sensu Vertebrata) | 3.42e-13 | 15 |
blood vessel endothelial cell | 3.23e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.23e-12 | 18 |
neuronal stem cell | 4.97e-11 | 8 |
lining cell | 1.78e-10 | 58 |
barrier cell | 1.78e-10 | 58 |
oligodendrocyte | 1.34e-09 | 7 |
macroglial cell | 1.34e-09 | 7 |
astrocyte | 1.34e-09 | 7 |
oligodendrocyte precursor cell | 1.34e-09 | 7 |
neuron | 6.99e-09 | 6 |
neuroblast | 6.99e-09 | 6 |
electrically signaling cell | 6.99e-09 | 6 |
epithelial cell | 1.04e-08 | 253 |
epithelial cell of nephron | 1.11e-07 | 15 |
vein endothelial cell | 1.77e-07 | 6 |
mesodermal cell | 7.04e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 3.00e-10 | 22 |
germ cell cancer | 3.00e-10 | 22 |
neuroectodermal tumor | 3.08e-08 | 10 |
nervous system cancer | 1.59e-07 | 11 |