FFCP PHASE1:Hg19::chr20:62680984..62680999,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54345 | |EntrezGene=54345 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11194 | |HGNC=11194 | ||
|TSSclassifier=strong | |||
|UniProt=P35713 | |UniProt=P35713 | ||
|association_with_transcript=0bp_to_ENST00000340356_5end | |association_with_transcript=0bp_to_ENST00000340356_5end | ||
|cluster_id=chr20:62680984..62680999,- | |||
|coexpression_cluster_id=C140 | |coexpression_cluster_id=C140 | ||
|description=CAGE_peak_1_at_SOX18_5end | |description=CAGE_peak_1_at_SOX18_5end | ||
|id=chr20:62680984..62680999,- | |id=chr20:62680984..62680999,- | ||
|ontology_enrichment_celltype=CL:0002139!4.97e-18!24;CL:0000115!5.94e-17!35;CL:0000071!4.40e-14!18;CL:0002546!4.40e-14!18;CL:0002078!7.50e-14!44;CL:0000213!1.21e-12!57;CL:0000215!1.21e-12!57;CL:1000413!9.13e-08!9 | |ontology_enrichment_celltype=CL:0002139!4.97e-18!24;CL:0000115!5.94e-17!35;CL:0000071!4.40e-14!18;CL:0002546!4.40e-14!18;CL:0002078!7.50e-14!44;CL:0000213!1.21e-12!57;CL:0000215!1.21e-12!57;CL:1000413!9.13e-08!9 | ||
|ontology_enrichment_celltype_v019=CL:0002139;2.33e-21;24!CL:0000115;2.55e-17;36!CL:0000071;1.30e-16;18!CL:0002078;1.95e-10;45!CL:1000413;5.07e-09;9!CL:0000213;2.34e-08;58!CL:0000215;2.34e-08;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,2.40e-21,24;CL:0000115,1.78e-20,36;CL:0000071,1.33e-16,18;CL:0002546,1.33e-16,18;CL:0002078,1.05e-15,45;CL:0000213,1.20e-13,58;CL:0000215,1.20e-13,58;CL:1000413,5.12e-09,9 | |||
|ontology_enrichment_development_v019=CL:0002546;1.30e-16;18!UBERON:0006601;3.36e-09;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.16e-36!115;UBERON:0004111!5.15e-18!241;UBERON:0000477!2.85e-17!286;UBERON:0000025!6.01e-16!194;UBERON:0001049!4.85e-15!57;UBERON:0005068!4.85e-15!57;UBERON:0006241!4.85e-15!57;UBERON:0007135!4.85e-15!57;UBERON:0001017!3.59e-14!82;UBERON:0001986!4.40e-14!18;UBERON:0004638!4.40e-14!18;UBERON:0004852!4.40e-14!18;UBERON:0000955!6.67e-14!69;UBERON:0006238!6.67e-14!69;UBERON:0005743!1.59e-13!86;UBERON:0000073!7.20e-13!94;UBERON:0001016!7.20e-13!94;UBERON:0002616!2.18e-12!59;UBERON:0003080!3.54e-12!42;UBERON:0002346!4.80e-12!90;UBERON:0002780!1.24e-11!41;UBERON:0001890!1.24e-11!41;UBERON:0006240!1.24e-11!41;UBERON:0003075!1.80e-11!86;UBERON:0007284!1.80e-11!86;UBERON:0000487!2.94e-11!22;UBERON:0006914!1.32e-10!25;UBERON:0002020!7.66e-10!34;UBERON:0003528!7.66e-10!34;UBERON:0001893!9.14e-10!34;UBERON:0002791!1.89e-09!33;UBERON:0001869!3.45e-09!32;UBERON:0002619!9.66e-09!22;UBERON:0000483!1.08e-08!309;UBERON:0000119!1.43e-08!312;UBERON:0001950!3.87e-08!20;UBERON:0003915!9.13e-08!9;UBERON:0004700!9.13e-08!9;UBERON:0001917!9.13e-08!9;UBERON:0000924!2.53e-07!173;UBERON:0006601!2.53e-07!173;UBERON:0000153!4.66e-07!129;UBERON:0007811!4.66e-07!129;UBERON:0000956!6.83e-07!25;UBERON:0000203!6.83e-07!25;UBERON:0004121!7.21e-07!169 | |ontology_enrichment_uberon=UBERON:0007023!4.16e-36!115;UBERON:0004111!5.15e-18!241;UBERON:0000477!2.85e-17!286;UBERON:0000025!6.01e-16!194;UBERON:0001049!4.85e-15!57;UBERON:0005068!4.85e-15!57;UBERON:0006241!4.85e-15!57;UBERON:0007135!4.85e-15!57;UBERON:0001017!3.59e-14!82;UBERON:0001986!4.40e-14!18;UBERON:0004638!4.40e-14!18;UBERON:0004852!4.40e-14!18;UBERON:0000955!6.67e-14!69;UBERON:0006238!6.67e-14!69;UBERON:0005743!1.59e-13!86;UBERON:0000073!7.20e-13!94;UBERON:0001016!7.20e-13!94;UBERON:0002616!2.18e-12!59;UBERON:0003080!3.54e-12!42;UBERON:0002346!4.80e-12!90;UBERON:0002780!1.24e-11!41;UBERON:0001890!1.24e-11!41;UBERON:0006240!1.24e-11!41;UBERON:0003075!1.80e-11!86;UBERON:0007284!1.80e-11!86;UBERON:0000487!2.94e-11!22;UBERON:0006914!1.32e-10!25;UBERON:0002020!7.66e-10!34;UBERON:0003528!7.66e-10!34;UBERON:0001893!9.14e-10!34;UBERON:0002791!1.89e-09!33;UBERON:0001869!3.45e-09!32;UBERON:0002619!9.66e-09!22;UBERON:0000483!1.08e-08!309;UBERON:0000119!1.43e-08!312;UBERON:0001950!3.87e-08!20;UBERON:0003915!9.13e-08!9;UBERON:0004700!9.13e-08!9;UBERON:0001917!9.13e-08!9;UBERON:0000924!2.53e-07!173;UBERON:0006601!2.53e-07!173;UBERON:0000153!4.66e-07!129;UBERON:0007811!4.66e-07!129;UBERON:0000956!6.83e-07!25;UBERON:0000203!6.83e-07!25;UBERON:0004121!7.21e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.30e-16;18!UBERON:0001986;1.30e-16;18!UBERON:0004852;1.30e-16;18!UBERON:0000487;1.01e-13;22!UBERON:0007023;2.46e-12;114!UBERON:0006914;5.18e-12;25!UBERON:0002780;2.85e-10;41!UBERON:0001890;2.85e-10;41!UBERON:0002619;3.43e-10;22!UBERON:0003528;5.45e-10;34!UBERON:0002020;5.45e-10;34!UBERON:0001893;6.48e-10;34!UBERON:0001869;7.04e-10;32!UBERON:0002791;8.17e-10;32!UBERON:0001950;1.84e-09;20!UBERON:0000073;4.61e-09;53!UBERON:0002616;4.61e-09;53!UBERON:0003915;5.07e-09;9!UBERON:0004700;5.07e-09;9!UBERON:0001917;5.07e-09;9!UBERON:0000922;3.77e-08;49!UBERON:0000956;4.27e-08;25!UBERON:0000203;4.27e-08;25!UBERON:0002465;2.63e-07;10!UBERON:0000955;7.12e-07;68!UBERON:0001017;8.76e-07;75 | |||
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| ||
|short_description=p1@SOX18 | |short_description=p1@SOX18 | ||
}} | }} |
Latest revision as of 15:13, 17 September 2015
Short description: | p1@SOX18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SOX18_5end |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | 0bp_to_ENST00000340356_5end |
EntrezGene: | SOX18 |
HGNC: | 11194 |
UniProt: | P35713 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 2.40e-21 | 24 |
endothelial cell | 1.78e-20 | 36 |
blood vessel endothelial cell | 1.33e-16 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.33e-16 | 18 |
meso-epithelial cell | 1.05e-15 | 45 |
lining cell | 1.20e-13 | 58 |
barrier cell | 1.20e-13 | 58 |
endothelial cell of artery | 5.12e-09 | 9 |