FFCP PHASE1:Hg19::chr2:54785880..54785891,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6711 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11275 | |||
|TSSclassifier=strong | |||
|UniProt=Q01082 | |||
|association_with_transcript=349bp_to_ENST00000333896,NM_178313,uc002rxx.2_5end | |||
|cluster_id=chr2:54785880..54785891,+ | |||
|description=CAGE_peak_20_at_SPTBN1_5end | |||
|id=chr2:54785880..54785891,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.95e-17!254;CL:0000220!2.18e-11!246;CL:0002321!3.77e-11!248;CL:0000548!4.87e-09!679;CL:0000004!4.87e-09!679;CL:0000255!4.87e-09!679;CL:0000012!7.33e-09!682;CL:0000076!1.22e-07!62;CL:0002076!6.52e-07!43 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,2.34e-07,32;CL:0002595,3.44e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:193!7.48e-07!29 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000490!1.32e-07!138;UBERON:0004119!2.47e-07!169;UBERON:0000925!2.47e-07!169;UBERON:0006595!2.47e-07!169;UBERON:0001637!2.48e-07!42;UBERON:0003509!2.48e-07!42;UBERON:0004572!2.48e-07!42;UBERON:0003914!3.05e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0003513;6.78e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003513,2.40e-07,7;UBERON:0003834,3.44e-07,5;UBERON:0001533,3.44e-07,5;UBERON:0002418,9.24e-07,3;UBERON:0004755,9.24e-07,3 | |||
|phase1_expression=0,0,0.140954404095971,1.0007329835313,0,0.872338524100369,0,0,0,0.491467873003018,0,1.31064823278103,1.05506791291381,1.48519623552056,1.98838425436749,0,0.602694528023977,0,0.487932798790507,0.492484232307152,0.408001382488506,0.313454721478088,1.14494394852423,0,0.251085279189606,0.229240217243854,0.246301768349837,0.236132343941038,0,0,0,0,0.90361775633475,1.10926203050036,0,0,0.587200878669695,0,0,0.217010870715852,0,0.32389366601898,0,0,0.377875943688809,0,0.232429036905685,0,0,0.575384784644301,0.256160706529101,0,0,0,0,0,0.272906150057846,0,0,0.320929027076094,0.639337125799041,0,0.199463657621632,0,0,0,0,0,0,0.217188844705117,0,0.368277635987565,0,0,0,0,0.112328631146495,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0.196709770113833,0.786021525498329,0.822405995998037,0.334372990781356,0,0,0,0,0.294605907474837,0.221533894583621,0,0.25618263945135,0,0,0,0.289803085735052,0.14828656316206,0.267540828089713,2.09071047609954,0,0.383220493601921,0.34362744548263,0,0,0,0,0.301150238155546,0.639933055772092,0,0.236777252044017,0,0.201606743224732,0.267440195783507,0.289648807765598,0,0,0.767175371061182,0.722878304769133,0,0.434539556882471,1.5905718941022,0.973269740605272,0.945348171640679,0.665188192387692,1.05401742831751,0.196468613246569,0,0.370784442784429,0,0,0,0.238490624305342,0,0.74291500265913,0.79504962946682,0,0,0.56530794192401,0.838998872419812,1.10047216776027,0.626984899610432,0.258416759169329,0.35576626268671,0,0,0,0.24406205754817,0.735326160691737,0.81014194788176,0.803697554556718,0.22452937262617,0.337834441449967,1.53316637465883,0,0.916008719652036,0,0,0.436094052142534,0.993943903390637,1.51956613997496,0.397227542439656,1.72101972449288,1.06400514659507,0,2.1349799145941,1.2333377420858,0.622422070799533,1.21239604862719,1.30769522490767,1.05950199351452,0,0.468642863667593,0,0,0.149448680551801,0.469737994575059,0,0,1.22492502752936,0.737005903870608,0.103325781175765,0,0.247266929278557,0,0,0.505008341862199,0.875829639103749,0.277064115484183,0.438977620880838,0.612975591598039,0.150238058906597,0.453728732640084,3.40840307808838,0,0,0.300091096084402,0.618315175430633,1.8034837803194,0.37223371266318,0.843881661206331,0.0974370051611986,0.252433774244115,0,0,0.355009592516614,0.806016785821122,0,0.57978255948989,1.36373060295417,0.860413786167011,0.243947412259191,0,0.348581828608555,0.621966330092223,0,0,0,0,0,0,0,0.236613600079688,0.168584690078102,0.241011029883482,0.661763836394364,0.653638332277218,0.237270619111097,0.269662616320329,0.196221465125346,0,0,1.40241773803446,1.6462960453256,1.47008711385542,0,0.982827216677626,1.18157981336281,0,0.491953754172454,1.20097467208968,0.98775256867763,1.1240175325762,0.201057944823262,0.462942225792648,0.325808305310325,0,1.44331342025273,0.463721619900307,2.46558257895225,0.144366447761074,0,0,0,0.858486162094873,0,0.702012795417713,0.297262324577456,1.87467667973554,1.34385702559088,0.425325291727159,0.985143749731331,1.45316969256981,1.15014803749563,0.985326475791887,0.264145302039678,0.207328115540772,0.288239906833923,0.25248486685276,0.317489471460845,0.381988425558278,3.51652341630141,0,0.308482478109971,1.8020583470635,2.00078502841405,1.90622843387113,0,1.0267360014933,1.55126058909333,0,0,0,0,0.514414748524284,0,0.532844358032199,0.57191197463259,0,0,0,1.42156779497018,0,1.80863626235752,2.61460037580088,1.59956785891291,0,0,0,0.718874566474748,0,0,0,0,0.358121926479791,0.112085143993527,0,0,0.385029108839245,0,0,0,0,0,0,0,0,1.47229790062968,0,1.89885516589815,0.207970861530807,0.535286966391485,0.473107245101804,0.468565659970853,0.902838299183157,0,1.03473071292505,2.65690239414175,0.921845842708516,0,0.195801157462741,0,0.206768026122887,0,0,0,3.32870879020994,0.604780586659361,0,0.61384789315225,0,0.896974044789907,0,0.321707842287215,0,0.308419387605311,0.177561725313127,0,2.07701771673448,0,0.966875596732978,1.20303882181971,0.368323955743585,1.37777337797528,0.910455840033585,0.131124414959424,0.451199612907412,0.462092022626489,0,1.46139224653261,0.211103257785751,0,0.510281115829547,0.863663664408557,0,0.812839312631559,0.501689773854853,0,0,0,0,0,0.769350375349168,0.656029291399411,0.325378394664303,0.412164046590889,0.183138929636687,0.495056999523528,1.14853107599234,1.95018073810956,0,0.193341436584244,0.462145851343933,0.15350367472613,0.137836572484531,0.537101224341368,0.290033387828457,0.255679882248303,0.178064071293475,1.4875642382488,1.53752053892085,3.95599408733211,0.30347334256665,1.39453664789186,2.83331112147576,0,0.308033580176089,0.532306030317022,0.869932992075073,0.37064843820784,1.28812398067792,0,2.21465597303108,0.38126038784765,0,0,0,0,0.899362287916574,0.274537029736055,0.353437207037059,0.606547444719948,1.58510321173008,1.68503382495592,0,0.487426979262569,2.11300293513511,0.409499734223957,0.989838023675989,0,2.2054613741845,1.99031692572366,1.75380354101505,0,0,1.21746226177622,0.92947049429925,0.845086807596724,1.43411352204052,0.58949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| |||
|short_description=p20@SPTBN1 | |||
}} |
Latest revision as of 15:50, 17 September 2015
Short description: | p20@SPTBN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_SPTBN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 349bp_to_ENST00000333896, NM_178313, uc002rxx.2_5end |
EntrezGene: | SPTBN1 |
HGNC: | 11275 |
UniProt: | Q01082 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 2.34e-07 | 32 |
smooth muscle cell of the subclavian artery | 3.44e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
trunk blood vessel | 2.40e-07 | 7 |
thoracic segment blood vessel | 3.44e-07 | 5 |
subclavian artery | 3.44e-07 | 5 |
cartilage tissue | 9.24e-07 | 3 |
skeletal tissue | 9.24e-07 | 3 |