FFCP PHASE1:Hg19::chr19:36643592..36643601,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1346 | |EntrezGene=1346 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2287 | |HGNC=2287 | ||
|TSSclassifier=strong | |||
|UniProt=P24310,Q6FGI7 | |UniProt=P24310,Q6FGI7 | ||
|association_with_transcript=169bp_to_ENST00000292907,NM_001864,uc002odm.1_5end | |association_with_transcript=169bp_to_ENST00000292907,NM_001864,uc002odm.1_5end | ||
|cluster_id=chr19:36643592..36643601,- | |||
|description=CAGE_peak_3_at_COX7A1_5end | |description=CAGE_peak_3_at_COX7A1_5end | ||
|id=chr19:36643592..36643601,- | |id=chr19:36643592..36643601,- | ||
|ontology_enrichment_celltype=CL:0002139!8.99e-11!24;CL:0000222!4.70e-09!119;CL:0002334!2.54e-08!12;CL:0000055!3.58e-08!180;CL:0000136!5.64e-08!15;CL:0000057!2.21e-07!75;CL:0000071!3.86e-07!18;CL:0002546!3.86e-07!18;CL:0000192!4.22e-07!42;CL:0000514!4.22e-07!42;CL:0000680!4.84e-07!57;CL:0000056!4.84e-07!57;CL:0000355!4.84e-07!57 | |ontology_enrichment_celltype=CL:0002139!8.99e-11!24;CL:0000222!4.70e-09!119;CL:0002334!2.54e-08!12;CL:0000055!3.58e-08!180;CL:0000136!5.64e-08!15;CL:0000057!2.21e-07!75;CL:0000071!3.86e-07!18;CL:0002546!3.86e-07!18;CL:0000192!4.22e-07!42;CL:0000514!4.22e-07!42;CL:0000680!4.84e-07!57;CL:0000056!4.84e-07!57;CL:0000355!4.84e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0002580;1.31e-13;3!CL:0002594;5.47e-11;4!CL:0002561;1.22e-09;2!CL:0002334;3.59e-09;12!CL:0000136;4.00e-08;13!CL:0000359;2.87e-07;32!CL:0002144;5.31e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002580,1.09e-13,3;CL:0002594,6.86e-11,4;CL:0002561,8.22e-10,2;CL:0000136,1.47e-09,15;CL:0002334,3.22e-09,12;CL:0000359,6.58e-08,32;CL:0000222,8.74e-08,121;CL:0002144,6.56e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;2.91e-07;3!DOID:127;2.91e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,2.92e-07,3;DOID:127,2.92e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0000055!9.74e-18!69;UBERON:0004872!9.43e-16!84;UBERON:0002049!2.68e-15!79;UBERON:0007798!2.68e-15!79;UBERON:0001009!4.89e-14!113;UBERON:0001981!1.46e-13!60;UBERON:0007500!1.46e-13!60;UBERON:0004537!1.46e-13!60;UBERON:0006965!1.46e-13!60;UBERON:0004535!2.82e-13!110;UBERON:0003914!7.37e-08!118;UBERON:0001637!8.48e-08!42;UBERON:0003509!8.48e-08!42;UBERON:0004572!8.48e-08!42;UBERON:0004457!1.42e-07!12;UBERON:0000042!1.42e-07!12;UBERON:0000914!2.30e-07!83;UBERON:0002329!2.30e-07!83;UBERON:0003077!2.30e-07!83;UBERON:0003059!2.30e-07!83;UBERON:0007282!2.30e-07!83;UBERON:0009618!2.30e-07!83;UBERON:0007285!2.30e-07!83;UBERON:0002385!3.48e-07!63;UBERON:0001015!3.48e-07!63;UBERON:0000383!3.48e-07!63;UBERON:0001986!3.86e-07!18;UBERON:0004638!3.86e-07!18;UBERON:0004852!3.86e-07!18;UBERON:0004290!4.48e-07!70;UBERON:0001473!4.72e-07!8;UBERON:0004536!4.72e-07!8;UBERON:0006558!4.72e-07!8;UBERON:0000490!5.76e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0001310;5.47e-11;4!UBERON:0005406;3.81e-10;2!UBERON:0005933;1.22e-09;2!UBERON:0005942;1.22e-09;2!UBERON:0005932;1.22e-09;2!UBERON:0004457;5.02e-08;9!UBERON:0000042;5.02e-08;9!UBERON:0003688;3.25e-07;6!UBERON:0002358;3.25e-07;6!UBERON:0003684;3.25e-07;6!UBERON:0001178;3.25e-07;6!UBERON:0000310;4.40e-07;10!UBERON:0010523;5.31e-07;3!UBERON:0001915;5.31e-07;3!UBERON:0001982;5.31e-07;3!UBERON:0001637;9.49e-07;42!UBERON:0003509;9.49e-07;42!UBERON:0004572;9.49e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007500,8.30e-12,59;UBERON:0001981,8.30e-12,59;UBERON:0004537,8.30e-12,59;UBERON:0006965,8.30e-12,59;UBERON:0000055,1.75e-11,68;UBERON:0001310,6.86e-11,4;UBERON:0005406,1.93e-10,2;UBERON:0005933,8.22e-10,2;UBERON:0005942,8.22e-10,2;UBERON:0005932,8.22e-10,2;UBERON:0002049,1.37e-09,78;UBERON:0007798,1.37e-09,78;UBERON:0001637,7.89e-09,42;UBERON:0003509,7.89e-09,42;UBERON:0004572,7.89e-09,42;UBERON:0004872,8.04e-09,83;UBERON:0003688,4.45e-07,6;UBERON:0002358,4.45e-07,6;UBERON:0003684,4.45e-07,6;UBERON:0001178,4.45e-07,6;UBERON:0000310,4.88e-07,10;UBERON:0004535,5.78e-07,109;UBERON:0010523,6.56e-07,3;UBERON:0001915,6.56e-07,3;UBERON:0001982,6.56e-07,3 | |||
|phase1_expression=1.09007027562334,0.428201047781966,1.26858963686374,1.0007329835313,0.893922188854576,1.74467704820074,0,0,0.261185628199839,0,0,0.218441372130172,0.263766978228454,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.383587685530591,0,1.50401373190767,0.434539556882471,1.5905718941022,0.973269740605272,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0.993812036833525,0,1.38856200643038,0.56530794192401,0,0.550236083880135,1.04497483268405,1.8089173141853,0.71153252537342,0.33472061276467,0.402829317109147,3.80136052859256,1.22031028774085,0.367663080345869,0,0.535798369704479,0.44905874525234,0.675668882899933,1.53316637465883,0,0,0,0,0,0.496971951695318,0,0.397227542439656,0,0,0,0,0,0,0.134710672069688,0.326923806226917,0,0,0,0.624320153660641,1.1409436430889,1.34503812496621,0,0,0,1.02077085627447,0.368502951935304,0.309977343527296,0,0.247266929278557,0.910161361938026,0.718618141816238,0.168336113954066,0,0.831192346452549,0,0.612975591598039,0.300476117813194,0.340296549480063,0.179389635688862,0,0,0,0,0,0.558350568994769,0,0.0974370051611986,0,0.276149695926898,0.161646056818812,0,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,1.39310378409594,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,1.44331342025273,0,0.469634776943287,0.288732895522148,0.462985512576611,0.570762456703795,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0.257207374262142,0,0.266422179016099,0.285955987316295,0.542621605391443,0,0.977208552881205,0,0,0.301439377059586,0,0.099972991182057,0,0.502257091432126,0,0,1.14861935834114,0,1.15825045334063,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0.271265023699736,0,0.356857977594324,0.788512075169673,0.819989904948992,0.902838299183157,6.82222512167955,0,0,0,0.173767228936166,0.195801157462741,0,0,0,0,0.909382714338778,0,0,1.24053903909388,1.2276957863045,1.68396056659844,0.256278298511402,0.511707249066704,2.89537058058494,4.45254199334973,0.462629081407967,0.355123450626254,0.328508624055237,0,0.348631135379878,0,0,0,0.229628896329213,0.182091168006717,0.917870904715969,0,0,0,0,0,0,0.340187410553031,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.309123034943167,0,0,0.574265537996172,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7881490806424,0.924100740528266,0,1.73986598415015,1.66791797193528,0.286249773483982,0.372158369359667,0.949138274156178,0,0.511795582622668,0.42793898803392,0.318203247925937,0,0.539617372749944,0,0,0.606547444719948,12.6808256938407,0,0,0.731140468893853,0,0,0.424216295861138,0,0,1.32687795048244,0.876901770507525,0.578775534266688,0,2.43492452355245,1.239293992399,0.281695602532241,0.143411352204052,0.196498082026242,4.63672366925625,0.354761064070598,1.05553817648832,0.329294892959902,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0.296964680832639,0.307160702099232,0,0.140669416410513,0,0,0,0.796991953004279,0.276283915531148,0,0,0,0.933118762985422,0,0,0,0.295930216910801,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0.615602068030377,0,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0.758238955541855,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0.687944129886466,0,0,0,0.290967049465258,0,0.225980740780532,0,0,0,0,0,0.426905989478705,0,0,0.229073192331831,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,1.60412296808179,0.717873024576814,0.798716001995964,0,0.89268582976749,0.201550417460179,0.720599767084807,0,0,0,0,0,0,0,0.544813624446302,0,0,0,0,0,0.121499113316049,0,0.157611414598396,0.104909176269996,0,0,0,0.714695326373367,0,0,0.542999601753713,2.5926644736038,3.91904832131291,0,0,0,0,0,0,0.129282956361551,0.39669780522807,0,0,0.427149650270779,0,0,0,0,0,0,1.08803560673895,0.7520696820681,0.612691153526923,0,0,0,0,0.1251909307065,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0.889811221596536,0.228840068396924,0.302461847526478,0,0.295710299979268,0,0,0,1.24411862352257,0.265841714557995,0.521745061811734,0.150257608997218,0.761610424337591,0,0.545545977607678,0.107410557042488,0,0.398095888698616,0.400027764663154,0.686791410365586,1.01024846629776,0,0,1.50109113962448,0,0,0,0,0,0.617602894321944,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,0.3062454773532,0.128458450192919,0,0.159633859057151,0.205116364240755,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0.376051641746286,0.20170506870352,0,0,0,0,0.135075169236789,0,0,0.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|phase1_expression=1.09007027562334,0.428201047781966,1.26858963686374,1.0007329835313,0.893922188854576,1.74467704820074,0,0,0.261185628199839,0,0,0.218441372130172,0.263766978228454,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.383587685530591,0,1.50401373190767,0.434539556882471,1.5905718941022,0.973269740605272,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0.993812036833525,0,1.38856200643038,0.56530794192401,0,0.550236083880135,1.04497483268405,1.8089173141853,0.71153252537342,0.33472061276467,0.402829317109147,3.80136052859256,1.22031028774085,0.367663080345869,0,0.535798369704479,0.44905874525234,0.675668882899933,1.53316637465883,0,0,0,0,0,0.496971951695318,0,0.397227542439656,0,0,0,0,0,0,0.134710672069688,0.326923806226917,0,0,0,0.624320153660641,1.1409436430889,1.34503812496621,0,0,0,1.02077085627447,0.368502951935304,0.309977343527296,0,0.247266929278557,0.910161361938026,0.718618141816238,0.168336113954066,0,0.831192346452549,0,0.612975591598039,0.300476117813194,0.340296549480063,0.179389635688862,0,0,0,0,0,0.558350568994769,0,0.0974370051611986,0,0.276149695926898,0.161646056818812,0,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,1.39310378409594,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,1.44331342025273,0,0.469634776943287,0.288732895522148,0.462985512576611,0.570762456703795,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0.257207374262142,0,0.266422179016099,0.285955987316295,0.542621605391443,0,0.977208552881205,0,0,0.301439377059586,0,0.099972991182057,0,0.502257091432126,0,0,1.14861935834114,0,1.15825045334063,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0.271265023699736,0,0.356857977594324,0.788512075169673,0.819989904948992,0.902838299183157,6.82222512167955,0,0,0,0.173767228936166,0.195801157462741,0,0,0,0,0.909382714338778,0,0,1.24053903909388,1.2276957863045,1.68396056659844,0.256278298511402,0.511707249066704,2.89537058058494,4.45254199334973,0.462629081407967,0.355123450626254,0.328508624055237,0,0.348631135379878,0,0,0,0.229628896329213,0.182091168006717,0.917870904715969,0,0,0,0,0,0,0.340187410553031,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.309123034943167,0,0,0.574265537996172,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7881490806424,0.924100740528266,0,1.73986598415015,1.66791797193528,0.286249773483982,0.372158369359667,0.949138274156178,0,0.511795582622668,0.42793898803392,0.318203247925937,0,0.539617372749944,0,0,0.606547444719948,12.6808256938407,0,0,0.731140468893853,0,0,0.424216295861138,0,0,1.32687795048244,0.876901770507525,0.578775534266688,0,2.43492452355245,1.239293992399,0.281695602532241,0.143411352204052,0.196498082026242,4.63672366925625,0.354761064070598,1.05553817648832,0.329294892959902,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0.296964680832639,0.307160702099232,0,0.140669416410513,0,0,0,0.796991953004279,0.276283915531148,0,0,0,0.933118762985422,0,0,0,0.295930216910801,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0.615602068030377,0,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0.758238955541855,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0.687944129886466,0,0,0,0.290967049465258,0,0.225980740780532,0,0,0,0,0,0.426905989478705,0,0,0.229073192331831,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,1.60412296808179,0.717873024576814,0.798716001995964,0,0.89268582976749,0.201550417460179,0.720599767084807,0,0,0,0,0,0,0,0.544813624446302,0,0,0,0,0,0.121499113316049,0,0.157611414598396,0.104909176269996,0,0,0,0.714695326373367,0,0,0.542999601753713,2.5926644736038,3.91904832131291,0,0,0,0,0,0,0.129282956361551,0.39669780522807,0,0,0.427149650270779,0,0,0,0,0,0,1.08803560673895,0.7520696820681,0.612691153526923,0,0,0,0,0.1251909307065,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0.889811221596536,0.228840068396924,0.302461847526478,0,0.295710299979268,0,0,0,1.24411862352257,0.265841714557995,0.521745061811734,0.150257608997218,0.761610424337591,0,0.545545977607678,0.107410557042488,0,0.398095888698616,0.400027764663154,0.686791410365586,1.01024846629776,0,0,1.50109113962448,0,0,0,0,0,0.617602894321944,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,0.3062454773532,0.128458450192919,0,0.159633859057151,0.205116364240755,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0.376051641746286,0.20170506870352,0,0,0,0,0.135075169236789,0,0,0.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| ||
|short_description=p3@COX7A1 | |short_description=p3@COX7A1 | ||
}} | }} |
Latest revision as of 16:15, 17 September 2015
Short description: | p3@COX7A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_COX7A1_5end |
Coexpression cluster: | NA |
Association with transcript: | 169bp_to_ENST00000292907, NM_001864, uc002odm.1_5end |
EntrezGene: | COX7A1 |
HGNC: | 2287 |
UniProt: | P24310Q6FGI7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte of the breast | 1.09e-13 | 3 |
smooth muscle cell of the umbilical artery | 6.86e-11 | 4 |
outer root sheath cell | 8.22e-10 | 2 |
fat cell | 1.47e-09 | 15 |
preadipocyte | 3.22e-09 | 12 |
vascular associated smooth muscle cell | 6.58e-08 | 32 |
mesodermal cell | 8.74e-08 | 121 |
capillary endothelial cell | 6.56e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelial tube open at both ends | 8.30e-12 | 59 |
blood vessel | 8.30e-12 | 59 |
blood vasculature | 8.30e-12 | 59 |
vascular cord | 8.30e-12 | 59 |
vessel | 1.75e-11 | 68 |
umbilical artery | 6.86e-11 | 4 |
perirenal fat | 1.93e-10 | 2 |
hair root sheath | 8.22e-10 | 2 |
hair outer root sheath | 8.22e-10 | 2 |
bulb of hair follicle | 8.22e-10 | 2 |
vasculature | 1.37e-09 | 78 |
vascular system | 1.37e-09 | 78 |
artery | 7.89e-09 | 42 |
arterial blood vessel | 7.89e-09 | 42 |
arterial system | 7.89e-09 | 42 |
splanchnic layer of lateral plate mesoderm | 8.04e-09 | 83 |
omentum | 4.45e-07 | 6 |
peritoneum | 4.45e-07 | 6 |
abdominal cavity | 4.45e-07 | 6 |
visceral peritoneum | 4.45e-07 | 6 |
breast | 4.88e-07 | 10 |
cardiovascular system | 5.78e-07 | 109 |
microcirculatory vessel | 6.56e-07 | 3 |
endothelium of capillary | 6.56e-07 | 3 |
capillary | 6.56e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 2.92e-07 | 3 |
leiomyoma | 2.92e-07 | 3 |