FFCP PHASE1:Hg19::chr12:16759574..16759585,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55885 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6643 | |||
|TSSclassifier=strong | |||
|UniProt=Q8TAP4 | |||
|association_with_transcript=-38bp_to_NM_018640_5end | |||
|cluster_id=chr12:16759574..16759585,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_8_at_LMO3_5end | |||
|id=chr12:16759574..16759585,- | |||
|ontology_enrichment_celltype=CL:0000047!6.74e-07!8 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.34e-16;82!UBERON:0010122;4.15e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.63e-53!82;UBERON:0001049!3.80e-52!57;UBERON:0005068!3.80e-52!57;UBERON:0006241!3.80e-52!57;UBERON:0007135!3.80e-52!57;UBERON:0005743!3.82e-52!86;UBERON:0000073!6.40e-49!94;UBERON:0001016!6.40e-49!94;UBERON:0007023!2.62e-46!115;UBERON:0002780!5.27e-46!41;UBERON:0001890!5.27e-46!41;UBERON:0006240!5.27e-46!41;UBERON:0003080!1.26e-44!42;UBERON:0002616!7.87e-43!59;UBERON:0001893!6.85e-42!34;UBERON:0002020!1.56e-41!34;UBERON:0003528!1.56e-41!34;UBERON:0000955!1.63e-41!69;UBERON:0006238!1.63e-41!69;UBERON:0002791!3.11e-40!33;UBERON:0001869!1.25e-39!32;UBERON:0002346!6.30e-37!90;UBERON:0003075!5.72e-34!86;UBERON:0007284!5.72e-34!86;UBERON:0002619!1.13e-33!22;UBERON:0001950!1.42e-30!20;UBERON:0000956!7.36e-29!25;UBERON:0000203!7.36e-29!25;UBERON:0003056!1.14e-28!61;UBERON:0000924!5.04e-23!173;UBERON:0006601!5.04e-23!173;UBERON:0004121!7.47e-21!169;UBERON:0000153!3.95e-20!129;UBERON:0007811!3.95e-20!129;UBERON:0000033!6.25e-20!123;UBERON:0002420!1.05e-14!9;UBERON:0007245!1.05e-14!9;UBERON:0010009!1.05e-14!9;UBERON:0010011!1.05e-14!9;UBERON:0000454!1.05e-14!9;UBERON:0002308!4.10e-14!9;UBERON:0000125!4.10e-14!9;UBERON:0009663!1.31e-11!7;UBERON:0000200!4.01e-11!6;UBERON:0001871!9.33e-11!7;UBERON:0000025!3.53e-10!194;UBERON:0000349!1.72e-09!5;UBERON:0002021!2.93e-09!5;UBERON:0002298!3.21e-09!8;UBERON:0000475!3.53e-09!365;UBERON:0003076!3.65e-09!15;UBERON:0003057!3.65e-09!15;UBERON:0001872!4.50e-09!5;UBERON:0004111!9.78e-09!241;UBERON:0000369!2.78e-08!4;UBERON:0002435!2.78e-08!4;UBERON:0000204!2.78e-08!4;UBERON:0010082!2.78e-08!4;UBERON:0000483!4.40e-08!309;UBERON:0000119!7.69e-08!312;UBERON:0000477!4.85e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.14e-64;22!UBERON:0001869;1.35e-64;32!UBERON:0001893;8.08e-64;34!UBERON:0003528;6.28e-62;34!UBERON:0002020;6.28e-62;34!UBERON:0002791;2.21e-60;32!UBERON:0001950;1.21e-58;20!UBERON:0000956;1.73e-56;25!UBERON:0000203;1.73e-56;25!UBERON:0002780;1.54e-55;41!UBERON:0001890;1.54e-55;41!UBERON:0000073;7.24e-49;53!UBERON:0002616;7.24e-49;53!UBERON:0001017;1.01e-31;75!UBERON:0000955;4.33e-29;68!UBERON:0001016;1.19e-25;83!UBERON:0000200;4.01e-20;6!UBERON:0002420;1.02e-17;9!UBERON:0007245;1.02e-17;9!UBERON:0010009;1.02e-17;9!UBERON:0010011;1.02e-17;9!UBERON:0000454;1.02e-17;9!UBERON:0002298;1.31e-17;6!UBERON:0000125;4.82e-17;9!UBERON:0002308;4.82e-17;9!UBERON:0000349;7.72e-17;5!UBERON:0001871;9.71e-17;6!UBERON:0002021;1.60e-16;5!UBERON:0001872;3.27e-16;5!UBERON:0000369;1.36e-14;4!UBERON:0002435;1.36e-14;4!UBERON:0000204;1.36e-14;4!UBERON:0007023;1.26e-12;114!UBERON:0009663;4.04e-12;7!UBERON:0004733;2.31e-11;12!UBERON:0002028;2.31e-11;12!UBERON:0005383;2.39e-11;3!UBERON:0005382;2.39e-11;3!UBERON:0001870;5.05e-11;3!UBERON:0004732;2.06e-10;13!UBERON:0000988;6.65e-10;3!UBERON:0001896;2.03e-09;3!UBERON:0005290;2.03e-09;3!UBERON:0011216;3.11e-09;132!UBERON:0001873;4.15e-08;2!UBERON:0002771;8.80e-08;2!UBERON:0002702;8.80e-08;2!UBERON:0001876;1.09e-07;2!UBERON:0001954;1.37e-07;2!UBERON:0003022;1.37e-07;2!UBERON:0002421;1.37e-07;2!UBERON:0002600;1.37e-07;2!UBERON:0002346;1.60e-07;4!UBERON:0000923;1.60e-07;4!UBERON:0010316;1.60e-07;4!UBERON:0005291;1.60e-07;4!UBERON:0001894;2.72e-07;7!UBERON:0010314;4.24e-07;132!UBERON:0001897;7.99e-07;2!UBERON:0002148;7.99e-07;2!UBERON:0006331;7.99e-07;2!UBERON:0009662;7.99e-07;2!UBERON:0010225;7.99e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.32e-90,56;UBERON:0005068,2.32e-90,56;UBERON:0006241,2.32e-90,56;UBERON:0007135,2.32e-90,56;UBERON:0000073,8.28e-87,53;UBERON:0002616,8.28e-87,53;UBERON:0001017,2.27e-82,81;UBERON:0002780,1.30e-77,41;UBERON:0001890,1.30e-77,41;UBERON:0003080,1.30e-77,41;UBERON:0006240,1.30e-77,41;UBERON:0001016,3.86e-73,89;UBERON:0001893,6.57e-73,34;UBERON:0001869,9.72e-73,32;UBERON:0003528,3.03e-72,34;UBERON:0002020,3.03e-72,34;UBERON:0000955,7.77e-72,68;UBERON:0006238,7.77e-72,68;UBERON:0002791,3.42e-67,32;UBERON:0002346,1.44e-64,86;UBERON:0002619,1.44e-64,22;UBERON:0003075,1.23e-58,82;UBERON:0007284,1.23e-58,82;UBERON:0001950,1.67e-58,20;UBERON:0000956,2.14e-56,25;UBERON:0000203,2.14e-56,25;UBERON:0003056,1.26e-49,61;UBERON:0010371,4.51e-44,104;UBERON:0007023,6.98e-44,114;UBERON:0004121,3.02e-38,171;UBERON:0000924,3.02e-38,171;UBERON:0006601,3.02e-38,171;UBERON:0010314,2.13e-36,132;UBERON:0011216,1.14e-27,223;UBERON:0000025,2.47e-20,192;UBERON:0000200,4.38e-20,6;UBERON:0002420,7.16e-18,9;UBERON:0007245,7.16e-18,9;UBERON:0010009,7.16e-18,9;UBERON:0010011,7.16e-18,9;UBERON:0000454,7.16e-18,9;UBERON:0002298,1.22e-17,6;UBERON:0000125,5.96e-17,9;UBERON:0002308,5.96e-17,9;UBERON:0000349,6.39e-17,5;UBERON:0001871,9.50e-17,6;UBERON:0002021,1.79e-16,5;UBERON:0001872,4.10e-16,5;UBERON:0004111,4.71e-16,240;UBERON:0003076,1.33e-14,15;UBERON:0003057,1.33e-14,15;UBERON:0000369,1.39e-14,4;UBERON:0002435,1.39e-14,4;UBERON:0000204,1.39e-14,4;UBERON:0010082,1.39e-14,4;UBERON:0009663,3.11e-12,7;UBERON:0004733,2.26e-11,12;UBERON:0002028,2.26e-11,12;UBERON:0007277,2.26e-11,12;UBERON:0005383,2.44e-11,3;UBERON:0005382,2.44e-11,3;UBERON:0001870,5.07e-11,3;UBERON:0004732,2.02e-10,13;UBERON:0000483,2.62e-10,306;UBERON:0000119,4.17e-10,309;UBERON:0001896,9.82e-10,3;UBERON:0005290,9.82e-10,3;UBERON:0010096,9.82e-10,3;UBERON:0000988,1.29e-09,3;UBERON:0000923,2.88e-09,560;UBERON:0010316,2.88e-09,560;UBERON:0005291,2.88e-09,560;UBERON:0006598,2.88e-09,560;UBERON:0010317,2.88e-09,560;UBERON:0002532,2.88e-09,560;UBERON:0002050,4.19e-09,564;UBERON:0005423,1.94e-08,581;UBERON:0001873,4.30e-08,2;UBERON:0010122,4.30e-08,2;UBERON:0000922,5.00e-08,592;UBERON:0002702,8.68e-08,2;UBERON:0001876,9.90e-08,2;UBERON:0002771,1.02e-07,2;UBERON:0001954,1.24e-07,2;UBERON:0003022,1.24e-07,2;UBERON:0002421,1.24e-07,2;UBERON:0002600,1.24e-07,2;UBERON:0001894,2.59e-07,7;UBERON:0006222,2.59e-07,7;UBERON:0001897,6.87e-07,2;UBERON:0010225,6.87e-07,2 | |||
|phase1_expression=0.363356758541113,0.642301571672949,1.26858963686374,0,2.23480547213644,0,2.53299878168311,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0,0,0,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622422070799533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0.723906533337896,0.821905290201534,1.61154866915906,0,0,0,0,0.254094624222463,3.90419561572865,1.54657762555539,3.68535783735567,3.18969375826582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.183138929636687,0,0,0,0,0,0.154048617114644,0.15350367472613,0,0,0,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11481905075431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0,2.98244294329889,6.04878490565205,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0.986434056369336,0,0,0.969332746095218,3.8034920246359,1.99613798001194,0,0,0,0,0,0,0,0.291604613383254,0.173624994933292,5.31444831488303,9.88890796728345,0,1.43753037910592,0,1.31631238292384,0,0,1.15425387755696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.884575645033392,0,0,0,0,1.21322039365219,0,3.04543779442941,0,0,0,0,0,2.44858209304392,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0.0882561266915003,0,0,0,7.59729551470544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,1.77976992559591,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0.0984274815147488,0,3.97614844904652,3.40508515278939,0,0.275078873194468,0,0,0,9.5984299519679,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,1.29282956361551,1.05786081394152,0,0,0.854299300541557,0.314408610199332,0,0,0,0,0,0,0.2506898940227,0.306345576763462,0,0.628216385000937,3.54427271986794,3.05065662254908,5.88397374320549,1.72022758707021,1.77486482458964,1.55241007353459,0.138348634936231,0,0.454947352624943,0,0,0,0.869526171664951,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60011105865261,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.53033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323474434190045,0.314531883711793,0,1.69732529954025,2.76347396132188,2.23084375666204,0,0,0,0,0,0,8.02865313705744,4.25089728976755,4.62938191265739,2.2562800066483,2.26864526599546,4.35690690524573,3.71393984953257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.2809953695107,1.56215619722769,5.58054350553197,6.21474939900287,1.09394961803644,0,0,0,0,0,0,0.606965604236632,3.87025725297206,0,0.115233987555779,0,4.2820931775404,4.40677582871089,0.354581522651905,0,1.33438257845874,7.69866390588409,0,0,0,0,0.643288897589907,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.154348316215889,0,0,1.47088993052343,0,0.785233868459781,1.48523200163543,1.6906229103336,0,0,0,0,0,0,0,0,0,0.143339583151451,0,4.41944686240946,1.30905207102113,0,0,0,0,0,0,0.126698501011437,0,0,0.18378979906969,0,0.151557396436479,0,1.65833887891756,1.34462894620464,0,0.476128862927481,0,0.0620747142958579,0.112131862580613,0.891060215894309,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0.488965776731466,0,1.33151354837103,0,0 | |||
|short_description=p8@LMO3 | |||
}} |
Latest revision as of 16:26, 17 September 2015
Short description: | p8@LMO3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_LMO3_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -38bp_to_NM_018640_5end |
EntrezGene: | LMO3 |
HGNC: | 6643 |
UniProt: | Q8TAP4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data