FFCP PHASE1:Hg19::chr2:55201868..55201901,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:55201868..55201901,-
|short_description=p13@RTN4
|description=CAGE_peak_13_at_RTN4_5end
|association_with_transcript=59bp_to_AK090714_5end
|EntrezGene=571...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57142 | |EntrezGene=57142 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=14085 | |HGNC=14085 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=59bp_to_AK090714_5end | |||
|cluster_id=chr2:55201868..55201901,- | |||
|description=CAGE_peak_13_at_RTN4_5end | |||
|id=chr2:55201868..55201901,- | |||
|ontology_enrichment_celltype=CL:0000055!2.00e-10!180;CL:0000057!4.17e-10!75 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.53e-08,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!4.97e-09!659;UBERON:0002020!5.57e-09!34;UBERON:0003528!5.57e-09!34;UBERON:0001049!3.67e-08!57;UBERON:0005068!3.67e-08!57;UBERON:0006241!3.67e-08!57;UBERON:0007135!3.67e-08!57;UBERON:0002791!6.42e-08!33;UBERON:0000467!6.72e-08!625;UBERON:0001893!8.68e-08!34;UBERON:0002616!8.98e-08!59;UBERON:0001869!9.12e-08!32;UBERON:0000480!1.12e-07!626;UBERON:0003080!1.71e-07!42;UBERON:0002780!4.28e-07!41;UBERON:0001890!4.28e-07!41;UBERON:0006240!4.28e-07!41;UBERON:0000956!7.35e-07!25;UBERON:0000203!7.35e-07!25;UBERON:0001017!9.90e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0002791;2.77e-07;32!UBERON:0003528;3.16e-07;34!UBERON:0002020;3.16e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,8.37e-09,34;UBERON:0002020,8.37e-09,34;UBERON:0002791,8.31e-08,32;UBERON:0002780,1.57e-07,41;UBERON:0001890,1.57e-07,41;UBERON:0003080,1.57e-07,41;UBERON:0006240,1.57e-07,41;UBERON:0000073,2.78e-07,53;UBERON:0002616,2.78e-07,53;UBERON:0001049,4.30e-07,56;UBERON:0005068,4.30e-07,56;UBERON:0006241,4.30e-07,56;UBERON:0007135,4.30e-07,56;UBERON:0001893,5.68e-07,34;UBERON:0001869,5.90e-07,32 | |||
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| ||
|short_description=p13@RTN4 | |||
}} | }} |
Latest revision as of 16:34, 17 September 2015
Short description: | p13@RTN4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_RTN4_5end |
Coexpression cluster: | NA |
Association with transcript: | 59bp_to_AK090714_5end |
EntrezGene: | RTN4 |
HGNC: | 14085 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.53e-08 | 76 |
Ontology term | p-value | n |
---|---|---|
brain grey matter | 8.37e-09 | 34 |
gray matter | 8.37e-09 | 34 |
regional part of telencephalon | 8.31e-08 | 32 |
regional part of forebrain | 1.57e-07 | 41 |
forebrain | 1.57e-07 | 41 |
anterior neural tube | 1.57e-07 | 41 |
future forebrain | 1.57e-07 | 41 |
regional part of nervous system | 2.78e-07 | 53 |
regional part of brain | 2.78e-07 | 53 |
neural tube | 4.30e-07 | 56 |
neural rod | 4.30e-07 | 56 |
future spinal cord | 4.30e-07 | 56 |
neural keel | 4.30e-07 | 56 |
telencephalon | 5.68e-07 | 34 |
cerebral hemisphere | 5.90e-07 | 32 |