FFCP PHASE1:Hg19::chr1:35247135..35247151,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2707 | |EntrezGene=2707 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4285 | |HGNC=4285 | ||
|TSSclassifier=strong | |||
|UniProt=O75712 | |UniProt=O75712 | ||
|association_with_transcript=345bp_to_ENST00000373366,NM_024009,uc001bxx.2_5end | |association_with_transcript=345bp_to_ENST00000373366,NM_024009,uc001bxx.2_5end | ||
|cluster_id=chr1:35247135..35247151,+ | |||
|coexpression_cluster_id=C511 | |coexpression_cluster_id=C511 | ||
|description=CAGE_peak_9_at_GJB3_5end | |description=CAGE_peak_9_at_GJB3_5end | ||
|id=chr1:35247135..35247151,+ | |id=chr1:35247135..35247151,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.36e-35!254;CL:0002076!7.86e-24!43;CL:0000223!3.58e-20!59;CL:0002368!6.94e-14!13;CL:0002251!2.47e-13!21;CL:0002159!2.41e-11!13;CL:0000622!2.03e-08!5;CL:0002202!2.29e-08!9;CL:0002632!2.29e-08!9;CL:0000244!1.92e-07!4;CL:0000731!1.92e-07!4;CL:0000154!6.72e-07!6 | |ontology_enrichment_celltype=CL:0000066!1.36e-35!254;CL:0002076!7.86e-24!43;CL:0000223!3.58e-20!59;CL:0002368!6.94e-14!13;CL:0002251!2.47e-13!21;CL:0002159!2.41e-11!13;CL:0000622!2.03e-08!5;CL:0002202!2.29e-08!9;CL:0002632!2.29e-08!9;CL:0000244!1.92e-07!4;CL:0000731!1.92e-07!4;CL:0000154!6.72e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002076;1.94e-22;42!CL:0002368;2.91e-20;13!CL:0002159;5.75e-18;14!CL:0002251;1.14e-14;20!CL:0000244;4.88e-14;4!CL:0000731;4.88e-14;4!CL:0002202;2.77e-13;9!CL:0002632;2.77e-13;9!CL:0002328;2.72e-11;3!CL:0002577;3.23e-11;3!CL:0000622;4.94e-11;5!CL:0000307;1.02e-10;3!CL:0002621;4.28e-10;3!CL:0000240;1.84e-09;6!CL:0000311;1.84e-09;6!CL:0000079;1.84e-09;6!CL:0000237;1.84e-09;6!CL:0000362;2.36e-09;9!CL:0000154;3.37e-09;6!CL:0002327;5.52e-09;4!CL:0002077;8.57e-09;34!CL:0000317;1.35e-07;2!CL:1000448;1.35e-07;2!CL:0002308;1.35e-07;2!CL:0002140;1.35e-07;2!CL:0000575;2.30e-07;2!CL:0000312;7.08e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.30e-30,42;CL:0000066,1.00e-28,253;CL:0000223,1.83e-20,58;CL:0002368,3.09e-20,13;CL:0002159,5.37e-18,14;CL:0002251,1.30e-14,20;CL:0000244,4.57e-14,4;CL:0000731,4.57e-14,4;CL:0002202,3.30e-13,9;CL:0002632,3.30e-13,9;CL:0002328,2.78e-11,3;CL:0002577,2.78e-11,3;CL:0000622,5.08e-11,5;CL:0000068,1.32e-10,3;CL:0000069,1.32e-10,3;CL:0000307,1.32e-10,3;CL:0000377,1.32e-10,3;CL:0002621,4.72e-10,3;CL:0002077,1.17e-09,34;CL:0000240,1.91e-09,6;CL:0000311,1.91e-09,6;CL:0000079,1.91e-09,6;CL:0000237,1.91e-09,6;CL:0000036,1.91e-09,6;CL:0000357,1.91e-09,6;CL:0000114,1.91e-09,6;CL:0000362,2.52e-09,9;CL:0000154,3.45e-09,6;CL:0002327,5.82e-09,4;CL:0000076,2.31e-08,63;CL:0000317,1.83e-07,2;CL:1000448,1.83e-07,2;CL:0002308,1.83e-07,2;CL:0002140,1.83e-07,2;CL:0000575,2.30e-07,2;CL:0000312,6.35e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000223;3.76e-12;58!CL:0000377;1.02e-10;3!CL:0000357;1.84e-09;6!CL:0000114;1.84e-09;6!UBERON:0008814;4.13e-07;2!UBERON:0010056;4.13e-07;2 | |||
|ontology_enrichment_disease=DOID:1749!2.90e-15!14;DOID:305!4.69e-14!106;DOID:299!3.59e-08!25;DOID:0050687!5.78e-08!143 | |ontology_enrichment_disease=DOID:1749!2.90e-15!14;DOID:305!4.69e-14!106;DOID:299!3.59e-08!25;DOID:0050687!5.78e-08!143 | ||
|ontology_enrichment_disease_v019=DOID:1749;9.86e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,8.85e-11,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!5.93e-22!169;UBERON:0000925!5.93e-22!169;UBERON:0006595!5.93e-22!169;UBERON:0001004!6.99e-17!72;UBERON:0005631!5.20e-14!14;UBERON:0000158!5.20e-14!14;UBERON:0001007!1.34e-13!155;UBERON:0001555!1.34e-13!155;UBERON:0007026!1.34e-13!155;UBERON:0000077!1.59e-13!130;UBERON:0000065!4.02e-13!53;UBERON:0000064!4.12e-11!219;UBERON:0004921!5.90e-11!129;UBERON:0004185!5.90e-11!129;UBERON:0000072!1.35e-10!46;UBERON:0003124!1.51e-10!7;UBERON:0001041!3.55e-10!98;UBERON:0000161!1.59e-09!35;UBERON:0000166!2.75e-09!21;UBERON:0008947!4.75e-09!38;UBERON:0003258!4.75e-09!38;UBERON:0000365!9.62e-09!5;UBERON:0000062!4.86e-08!511;UBERON:0007196!9.75e-08!14;UBERON:0001558!9.75e-08!14;UBERON:0000464!1.73e-07!104;UBERON:0003729!2.02e-07!5;UBERON:0000165!2.41e-07!28;UBERON:0000930!2.41e-07!28;UBERON:0005910!3.67e-07!6;UBERON:0001987!4.84e-07!4;UBERON:0004340!4.84e-07!4;UBERON:0000063!6.01e-07!97;UBERON:0000478!7.79e-07!24 | |ontology_enrichment_uberon=UBERON:0004119!5.93e-22!169;UBERON:0000925!5.93e-22!169;UBERON:0006595!5.93e-22!169;UBERON:0001004!6.99e-17!72;UBERON:0005631!5.20e-14!14;UBERON:0000158!5.20e-14!14;UBERON:0001007!1.34e-13!155;UBERON:0001555!1.34e-13!155;UBERON:0007026!1.34e-13!155;UBERON:0000077!1.59e-13!130;UBERON:0000065!4.02e-13!53;UBERON:0000064!4.12e-11!219;UBERON:0004921!5.90e-11!129;UBERON:0004185!5.90e-11!129;UBERON:0000072!1.35e-10!46;UBERON:0003124!1.51e-10!7;UBERON:0001041!3.55e-10!98;UBERON:0000161!1.59e-09!35;UBERON:0000166!2.75e-09!21;UBERON:0008947!4.75e-09!38;UBERON:0003258!4.75e-09!38;UBERON:0000365!9.62e-09!5;UBERON:0000062!4.86e-08!511;UBERON:0007196!9.75e-08!14;UBERON:0001558!9.75e-08!14;UBERON:0000464!1.73e-07!104;UBERON:0003729!2.02e-07!5;UBERON:0000165!2.41e-07!28;UBERON:0000930!2.41e-07!28;UBERON:0005910!3.67e-07!6;UBERON:0001987!4.84e-07!4;UBERON:0004340!4.84e-07!4;UBERON:0000063!6.01e-07!97;UBERON:0000478!7.79e-07!24 | ||
|ontology_enrichment_uberon_v019=UBERON:0000365;9.80e-17;5!UBERON:0000486;2.77e-16;12!UBERON:0005910;6.75e-14;6!UBERON:0004815;2.72e-11;3!UBERON:0002031;2.72e-11;3!UBERON:0005911;1.79e-10;36!UBERON:0001949;4.28e-10;3!UBERON:0000344;5.13e-09;20!UBERON:0001911;5.52e-09;4!UBERON:0001987;1.65e-08;4!UBERON:0003729;1.83e-08;13!UBERON:0004807;2.40e-08;22!UBERON:0000165;7.38e-08;28!UBERON:0007196;1.10e-07;15!UBERON:0001558;1.10e-07;15!UBERON:0002419;1.35e-07;2!UBERON:0007771;1.35e-07;2!UBERON:0003297;1.35e-07;2!UBERON:0001821;1.35e-07;2!UBERON:0003487;1.35e-07;2!UBERON:0001820;1.35e-07;2!UBERON:0000161;1.42e-07;19!UBERON:0000166;1.42e-07;19!UBERON:0002185;6.41e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,8.06e-17,5;UBERON:0004119,1.99e-14,160;UBERON:0000925,1.99e-14,160;UBERON:0006595,1.99e-14,160;UBERON:0005910,5.75e-14,6;UBERON:0001004,1.34e-11,74;UBERON:0004815,2.78e-11,3;UBERON:0002031,2.78e-11,3;UBERON:0003102,1.04e-10,99;UBERON:0001949,4.72e-10,3;UBERON:0000344,5.36e-09,20;UBERON:0001911,5.82e-09,4;UBERON:0005333,5.82e-09,4;UBERON:0008425,5.82e-09,4;UBERON:0005311,5.82e-09,4;UBERON:0000161,7.86e-09,36;UBERON:0001987,1.47e-08,4;UBERON:0004340,1.47e-08,4;UBERON:0005631,1.87e-08,14;UBERON:0000158,1.87e-08,14;UBERON:0003729,2.25e-08,13;UBERON:0000166,2.90e-08,22;UBERON:0003124,3.05e-08,7;UBERON:0005157,6.28e-08,47;UBERON:0006554,7.81e-08,47;UBERON:0007196,1.22e-07,15;UBERON:0001558,1.22e-07,15;UBERON:0000065,1.25e-07,54;UBERON:0001008,1.28e-07,48;UBERON:0000165,1.58e-07,29;UBERON:0000930,1.58e-07,29;UBERON:0005153,1.80e-07,37;UBERON:0002419,1.83e-07,2;UBERON:0007771,1.83e-07,2;UBERON:0003297,1.83e-07,2;UBERON:0001821,1.83e-07,2;UBERON:0003487,1.83e-07,2;UBERON:0001820,1.83e-07,2;UBERON:0005089,1.83e-07,2;UBERON:0005088,1.83e-07,2;UBERON:0000033,4.89e-07,56;UBERON:0002185,6.48e-07,5 | |||
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|short_description=p9@GJB3 | |short_description=p9@GJB3 | ||
}} | }} |
Latest revision as of 17:52, 17 September 2015
Short description: | p9@GJB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_GJB3_5end |
Coexpression cluster: | C511_Placental_Alveolar_Bronchial_amniotic_Gingival_Corneal_Mammary |
Association with transcript: | 345bp_to_ENST00000373366, NM_024009, uc001bxx.2_5end |
EntrezGene: | GJB3 |
HGNC: | 4285 |
UniProt: | O75712 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 8.85e-11 | 14 |