FFCP PHASE1:Hg19::chr17:75315534..75315612,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10801 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7323 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UHD8 | |||
|association_with_transcript=0bp_to_ENST00000329047,NM_006640,uc002jtu.3_5end | |||
|cluster_id=chr17:75315534..75315612,+ | |||
|coexpression_cluster_id=C3685 | |||
|description=CAGE_peak_4_at_SEPT9_5end | |||
|id=chr17:75315534..75315612,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.01e-30!180;CL:0000048!4.79e-29!430;CL:0000723!2.04e-27!436;CL:0000034!7.91e-25!444;CL:0002320!2.52e-19!365;CL:0002371!7.21e-19!591;CL:0000134!1.43e-17!358;CL:0000219!7.31e-17!390;CL:0000057!1.03e-16!75;CL:0000183!1.02e-15!59;CL:0000680!4.35e-15!57;CL:0000056!4.35e-15!57;CL:0000355!4.35e-15!57;CL:0000187!3.38e-14!54;CL:0000144!7.20e-14!625;CL:0000192!1.19e-13!42;CL:0000514!1.19e-13!42;CL:0000359!7.61e-12!32;CL:0002620!5.72e-10!23;CL:0000393!8.44e-10!60;CL:0000211!8.44e-10!60;CL:0000548!7.32e-09!679;CL:0000004!7.32e-09!679;CL:0000255!7.32e-09!679;CL:0000012!1.24e-08!682;CL:0000557!1.46e-07!71;CL:0002194!4.07e-07!63;CL:0000576!4.07e-07!63;CL:0000040!4.07e-07!63;CL:0000559!4.07e-07!63;CL:0002009!4.88e-07!65 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.15e-11;32!CL:0000192;3.33e-10;43!CL:0002620;4.08e-10;23!CL:0000187;9.19e-09;55!CL:0000134;1.21e-08;55!CL:0000057;6.26e-08;73!CL:0002320;2.85e-07;188!CL:0000048;4.75e-07;58!CL:0000723;8.55e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,4.24e-30,427;CL:0000723,1.54e-28,433;CL:0000034,5.21e-26,441;CL:0002320,8.98e-20,361;CL:0000134,5.49e-18,354;CL:0000219,1.92e-17,386;CL:0000057,5.23e-17,76;CL:0000680,2.25e-15,58;CL:0000056,2.25e-15,58;CL:0000355,2.25e-15,58;CL:0000187,1.80e-14,55;CL:0000192,6.78e-14,43;CL:0000514,6.78e-14,43;CL:0000359,5.49e-12,32;CL:0000393,2.99e-10,61;CL:0000211,2.99e-10,61;CL:0002620,4.38e-10,23;CL:0000557,2.25e-07,67;CL:0002194,5.16e-07,59;CL:0000576,5.16e-07,59;CL:0000040,5.16e-07,59;CL:0000559,5.16e-07,59;CL:0002009,6.27e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000514;3.33e-10;43!CL:0000355;1.03e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!8.75e-25!167;UBERON:0002384!1.27e-20!375;UBERON:0000914!2.23e-18!83;UBERON:0002329!2.23e-18!83;UBERON:0003077!2.23e-18!83;UBERON:0003059!2.23e-18!83;UBERON:0007282!2.23e-18!83;UBERON:0009618!2.23e-18!83;UBERON:0007285!2.23e-18!83;UBERON:0004290!1.16e-17!70;UBERON:0001134!8.03e-14!61;UBERON:0002036!8.03e-14!61;UBERON:0003082!8.03e-14!61;UBERON:0002385!8.29e-14!63;UBERON:0001015!8.29e-14!63;UBERON:0000383!8.29e-14!63;UBERON:0000486!2.41e-13!82;UBERON:0003081!4.69e-13!216;UBERON:0000926!2.96e-12!448;UBERON:0004120!2.96e-12!448;UBERON:0006603!2.96e-12!448;UBERON:0004765!7.06e-11!101;UBERON:0001434!7.06e-11!101;UBERON:0005256!2.90e-10!143;UBERON:0001474!1.58e-09!86;UBERON:0002371!1.97e-09!80;UBERON:0000479!1.33e-08!787;UBERON:0002199!2.04e-08!45;UBERON:0002416!2.04e-08!45;UBERON:0003102!9.86e-08!95;UBERON:0002097!2.24e-07!40;UBERON:0004872!8.12e-07!84 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,1.45e-25,167;UBERON:0002384,4.46e-21,371;UBERON:0007503,5.32e-19,78;UBERON:0000926,5.66e-19,315;UBERON:0004120,5.66e-19,315;UBERON:0006603,5.66e-19,315;UBERON:0002329,5.43e-18,71;UBERON:0003059,5.43e-18,71;UBERON:0007282,5.43e-18,71;UBERON:0004290,5.43e-18,71;UBERON:0009618,5.43e-18,71;UBERON:0003077,1.24e-17,72;UBERON:0007285,1.24e-17,72;UBERON:0007524,1.73e-17,73;UBERON:0001134,4.23e-14,62;UBERON:0002036,4.23e-14,62;UBERON:0003082,4.23e-14,62;UBERON:0002385,4.35e-14,64;UBERON:0001015,4.35e-14,64;UBERON:0000383,4.35e-14,64;UBERON:0000486,2.43e-13,83;UBERON:0003081,2.98e-13,203;UBERON:0001434,3.05e-11,100;UBERON:0005256,2.84e-10,122;UBERON:0001474,1.82e-09,82;UBERON:0003104,2.07e-09,160;UBERON:0009142,2.07e-09,160;UBERON:0002371,2.52e-09,76;UBERON:0004765,3.77e-09,90;UBERON:0002199,7.20e-09,46;UBERON:0002416,7.20e-09,46;UBERON:0000479,5.30e-08,773;UBERON:0002097,8.27e-08,41;UBERON:0002405,5.31e-07,93 | |||
|phase1_expression=11.082381135504,13.274232481241,8.17535543756633,10.007329835313,12.0679495495368,13.9574163856059,10.1319951267324,61.9085475958294,10.4474251279935,4.91467873003018,9.07141518364156,17.0384270261534,21.6288922147332,13.8618315315252,21.8722267980424,21.5144046864568,12.6565850885035,16.0668219885222,15.1259167625057,5.0479633811483,7.95602695852587,2.19418305034661,1.14494394852423,0.958120975510189,6.15158934014534,11.3091840506968,10.8372778073928,8.7368967258184,5.50709987588466,2.68680578668049,8.3600706590681,3.67768489791571,0.90361775633475,0,0,0,1.17440175733939,18.281848481552,8.62341124121609,10.8505435357926,21.2719700527928,12.6318529747402,22.15149881654,7.70610665531693,12.4699061417307,10.9162827534517,6.50801303335917,14.3908760807639,13.0076675775944,16.9738511470069,22.2859814680318,14.1889337933151,6.20542225325913,10.3277549373412,12.1883837934908,5.45902784673554,12.0078706025452,7.86532195557796,13.1616073719488,13.4790191371959,14.0654167675789,12.5343494070952,13.9624560335142,14.0654167675789,22.6363206130296,44.8234327506,34.2552236947566,18.0899038984855,27.6385946762707,18.67824064464,14.5295880632009,20.9918252512912,21.2029799585393,0.633765858935825,0.637812899895131,0.838634582033504,3.48218756554135,3.00353785683013,0.803627933485401,0,0.19891667719909,0.182664153764634,0,0.546138611262131,0,0,0,0.574752439954483,0,0,0.569212969109448,0.587237189370939,0.382273228125229,2.64342657158052,2.80254281490768,1.58030450865046,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,1.04535523804977,0.113309342697566,0.383220493601921,0,0,0.637130828648193,0,0,0.451725357233318,0.255973222308837,0,0.236777252044017,0,0.201606743224732,0,0,21.9426179682566,7.37770945674,8.56679164351653,24.2164232097659,14.0374614978049,11.1531819599834,15.1104329939709,28.7114573478555,3.49778823507051,2.4390233720882,2.19586964232815,3.27447688744282,2.5500670180478,4.44941331341315,18.1746540446623,20.0249197894157,18.0822826305657,0,0,0.74291500265913,0.993812036833525,5.16140757063675,2.42998351125316,0.56530794192401,0,0.275118041940067,0.417989933073621,4.13466814670926,7.47109151642091,1.33888245105868,4.02829317109147,4.56163263431108,3.41686880567437,3.30896772311282,0,1.07159673940896,1.34717623575702,2.13961812918312,3.06633274931766,0,1.46561395144326,0,0,3.05265836499774,12.9212707440783,11.3967460498122,5.82600395578163,9.17877186396204,12.4133933769425,9.53151920241922,19.2148192313469,8.88003174301776,11.5148083097914,16.0305699762929,14.5481093770978,14.6816704815583,13.25204626304,17.1054645238672,35.5862487586565,22.2484010402335,21.9689560411148,25.2484172084094,26.7090358207417,29.0733169873654,27.1525047769008,24.3211948277301,29.2411960727416,19.0080457165129,11.1270118175351,44.5979067349633,51.0218880689529,23.3987198396152,25.5241780538807,27.4293474329341,25.8996796319694,22.0671212975294,18.629519304418,8.50741373700158,17.4007946618196,14.5219024396626,15.2590968834885,16.8051013807265,25.350922192656,10.3056216018252,23.0784901851171,16.3713042274028,14.6155507741798,15.1460264546469,15.372333073264,10.1837015795851,23.4306331060965,30.2256294682921,29.5035430620248,1.73934767846967,1.36373060295417,2.00763216772303,0,0,0,0.414644220061482,0,0,23.4674298494724,11.5783368874719,24.8642858434465,10.2160944167035,17.3251075600701,8.6363964029086,9.6093273344518,7.47134192638794,6.83822630940842,8.93305720778865,12.1008015746659,11.1909985772936,13.5392810936489,9.23393176671337,7.38155454624648,33.658025712827,14.405090396599,20.5812195939759,0,0.982827216677626,3.54473944008842,0,0.860919069801795,8.23525489432923,1.97550513735526,2.24803506515239,2.31216636546751,2.59247646443883,13.6839488230336,34.3178479142261,2.88662684050547,2.89826012437692,8.80565206768662,3.60916119402685,1.85194205030644,1.52203321787679,0,0,32.5006448035364,13.1042388477973,24.9700352645063,0,0.335964256397719,1.27597587518148,0.716468181622786,2.61570544662566,1.91691339582606,0.492663237895943,2.0251139823042,21.5621240162403,37.47118788841,37.4940027276348,18.033401978976,45.8386110669933,21.0991404978085,46.1895604261304,21.5937734676979,14.416466776508,11.4330573052231,45.5252202442164,28.7733645429965,24.5683257500183,14.7369755963867,46.4953379607447,19.441963308788,11.9672152463192,21.8415617513869,39.6099356363699,29.7883177248884,44.4925038956886,7.72081165753997,32.0146747180951,29.6366521241077,23.4530052691489,8.88479871856365,15.0470855857352,3.31583314765545,2.61460037580088,3.29910870900788,25.54099393465,28.6286542116312,29.5167515276244,31.1512312139057,26.4182452418462,12.8373214536647,17.0841941867743,23.2188244481933,13.0714503165124,0.784596007954691,0,0.431255149719035,0.385029108839245,0.254094624222463,0,0,0.502548796003046,0,0,0,0,9.81531933753119,11.5039219843726,16.2759014219841,22.668823906858,21.5899076444566,17.3472656537328,30.5739093130981,26.784202875767,15.9185252839189,9.31257641632544,24.5763471458112,28.9459594610474,17.7242573514889,50.712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| |||
|short_description=p4@SEPT9 | |||
}} |
Latest revision as of 18:16, 17 September 2015
Short description: | p4@SEPT9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SEPT9_5end |
Coexpression cluster: | C3685_Fibroblast_Pericytes_Mesenchymal_Meningeal_Trabecular_Adipocyte_Saos2 |
Association with transcript: | 0bp_to_ENST00000329047, NM_006640, uc002jtu.3_5end |
EntrezGene: | SEPT9 |
HGNC: | 7323 |
UniProt: | Q9UHD8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 4.24e-30 | 427 |
somatic stem cell | 1.54e-28 | 433 |
stem cell | 5.21e-26 | 441 |
connective tissue cell | 8.98e-20 | 361 |
mesenchymal cell | 5.49e-18 | 354 |
motile cell | 1.92e-17 | 386 |
fibroblast | 5.23e-17 | 76 |
muscle precursor cell | 2.25e-15 | 58 |
myoblast | 2.25e-15 | 58 |
multi-potent skeletal muscle stem cell | 2.25e-15 | 58 |
muscle cell | 1.80e-14 | 55 |
smooth muscle cell | 6.78e-14 | 43 |
smooth muscle myoblast | 6.78e-14 | 43 |
vascular associated smooth muscle cell | 5.49e-12 | 32 |
electrically responsive cell | 2.99e-10 | 61 |
electrically active cell | 2.99e-10 | 61 |
skin fibroblast | 4.38e-10 | 23 |
granulocyte monocyte progenitor cell | 2.25e-07 | 67 |
monopoietic cell | 5.16e-07 | 59 |
monocyte | 5.16e-07 | 59 |
monoblast | 5.16e-07 | 59 |
promonocyte | 5.16e-07 | 59 |
macrophage dendritic cell progenitor | 6.27e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 1.45e-25 | 167 |
connective tissue | 4.46e-21 | 371 |
epithelial vesicle | 5.32e-19 | 78 |
mesoderm | 5.66e-19 | 315 |
mesoderm-derived structure | 5.66e-19 | 315 |
presumptive mesoderm | 5.66e-19 | 315 |
somite | 5.43e-18 | 71 |
presomitic mesoderm | 5.43e-18 | 71 |
presumptive segmental plate | 5.43e-18 | 71 |
dermomyotome | 5.43e-18 | 71 |
trunk paraxial mesoderm | 5.43e-18 | 71 |
paraxial mesoderm | 1.24e-17 | 72 |
presumptive paraxial mesoderm | 1.24e-17 | 72 |
dense mesenchyme tissue | 1.73e-17 | 73 |
skeletal muscle tissue | 4.23e-14 | 62 |
striated muscle tissue | 4.23e-14 | 62 |
myotome | 4.23e-14 | 62 |
muscle tissue | 4.35e-14 | 64 |
musculature | 4.35e-14 | 64 |
musculature of body | 4.35e-14 | 64 |
multilaminar epithelium | 2.43e-13 | 83 |
lateral plate mesoderm | 2.98e-13 | 203 |
skeletal system | 3.05e-11 | 100 |
trunk mesenchyme | 2.84e-10 | 122 |
bone element | 1.82e-09 | 82 |
mesenchyme | 2.07e-09 | 160 |
entire embryonic mesenchyme | 2.07e-09 | 160 |
bone marrow | 2.52e-09 | 76 |
skeletal element | 3.77e-09 | 90 |
integument | 7.20e-09 | 46 |
integumental system | 7.20e-09 | 46 |
tissue | 5.30e-08 | 773 |
skin of body | 8.27e-08 | 41 |
immune system | 5.31e-07 | 93 |