FFCP PHASE1:Hg19::chr2:159992464..159992476,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=85461 | |EntrezGene=85461 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29364 | |HGNC=29364 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-228bp_to_uc002uah.1_5end | |association_with_transcript=-228bp_to_uc002uah.1_5end | ||
|cluster_id=chr2:159992464..159992476,+ | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_18_at_TANC1_5end | |description=CAGE_peak_18_at_TANC1_5end | ||
|id=chr2:159992464..159992476,+ | |id=chr2:159992464..159992476,+ | ||
|ontology_enrichment_celltype=CL:0002603!3.75e-10!3;CL:0000064!7.13e-10!3;CL:0005012!7.13e-10!3;CL:0000067!7.13e-10!3;CL:0002304!7.13e-10!3;CL:0002557!4.41e-08!1 | |ontology_enrichment_celltype=CL:0002603!3.75e-10!3;CL:0000064!7.13e-10!3;CL:0005012!7.13e-10!3;CL:0000067!7.13e-10!3;CL:0002304!7.13e-10!3;CL:0002557!4.41e-08!1 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004140;2.58e-34;1!UBERON:0005425;5.97e-34;1!UBERON:0003056;2.74e-12;3!UBERON:0005062;1.50e-09;4!UBERON:0007284;1.50e-09;4 | |||
|ontology_enrichment_disease=DOID:114!1.24e-15!2;DOID:178!1.31e-08!1;DOID:326!1.31e-08!1;DOID:3978!1.31e-08!1;DOID:3394!1.31e-08!1;DOID:5844!1.31e-08!1;DOID:1287!3.00e-08!4;DOID:8552!3.10e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:114;1.71e-66;2!DOID:178;5.97e-34;1!DOID:326;5.97e-34;1!DOID:3978;5.97e-34;1!DOID:3394;5.97e-34;1!DOID:5844;5.97e-34;1!DOID:1287;6.50e-34;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,2.03e-66,2;DOID:178,7.06e-34,1;DOID:326,7.06e-34,1;DOID:3978,7.06e-34,1;DOID:3394,7.06e-34,1;DOID:5844,7.06e-34,1;DOID:1287,7.07e-34,4 | |||
|ontology_enrichment_uberon=UBERON:0007100!7.69e-16!27;UBERON:0000341!4.80e-15!2;UBERON:0005162!7.31e-15!2;UBERON:0000122!7.31e-15!2;UBERON:0003978!1.41e-10!3;UBERON:0009751!1.41e-10!3;UBERON:0000946!1.41e-10!3;UBERON:0002523!1.41e-10!3;UBERON:0005983!1.41e-10!3;UBERON:0002165!1.41e-10!3;UBERON:0002062!1.41e-10!3;UBERON:0007280!1.41e-10!3;UBERON:0001778!7.13e-10!3;UBERON:0001775!7.13e-10!3;UBERON:0000941!1.13e-08!1;UBERON:0004904!1.13e-08!1;UBERON:0002464!1.13e-08!1;UBERON:0001021!1.13e-08!1;UBERON:0001785!1.13e-08!1;UBERON:0002135!1.41e-08!1;UBERON:0002146!1.52e-08!1;UBERON:0005623!1.52e-08!1;UBERON:0002084!1.75e-08!1;UBERON:0002082!1.75e-08!1;UBERON:0004706!1.75e-08!1;UBERON:0001282!4.11e-08!1;UBERON:0009842!4.11e-08!1;UBERON:0003704!4.11e-08!1;UBERON:0001171!4.11e-08!1;UBERON:0001172!4.11e-08!1;UBERON:0002336!6.68e-08!1;UBERON:0001018!6.68e-08!1;UBERON:0002473!6.68e-08!1;UBERON:0005340!6.68e-08!1;UBERON:0002316!6.68e-08!1;UBERON:0003544!6.68e-08!1;UBERON:0001020!6.68e-08!1;UBERON:0005970!6.68e-08!1;UBERON:0002437!6.68e-08!1;UBERON:0002372!7.16e-08!1;UBERON:0001961!7.16e-08!1;UBERON:0001744!7.16e-08!1;UBERON:0001735!7.16e-08!1;UBERON:0007023!8.29e-08!115;UBERON:0000488!1.28e-07!4;UBERON:0000948!3.12e-07!24;UBERON:0005498!3.12e-07!24;UBERON:0004140!3.12e-07!24;UBERON:0009881!3.12e-07!24;UBERON:0004141!3.12e-07!24;UBERON:0003084!3.12e-07!24;UBERON:0007005!3.12e-07!24;UBERON:0004139!3.12e-07!24;UBERON:0004291!3.12e-07!24;UBERON:0003103!6.69e-07!69;UBERON:0001009!9.66e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0002135;5.97e-34;1!UBERON:0000941;5.97e-34;1!UBERON:0001785;5.97e-34;1!UBERON:0002464;5.97e-34;1!UBERON:0004904;5.97e-34;1!UBERON:0001021;5.97e-34;1!UBERON:0007100;1.09e-21;25!UBERON:0003714;9.86e-18;2!UBERON:0005162;9.86e-18;2!UBERON:0000122;9.86e-18;2!UBERON:0002133;9.86e-18;2!UBERON:0003978;2.74e-12;3!UBERON:0000946;2.74e-12;3!UBERON:0000948;5.32e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,3.61e-34,1;UBERON:0001785,3.61e-34,1;UBERON:0002464,3.61e-34,1;UBERON:0004904,3.61e-34,1;UBERON:0001021,3.61e-34,1;UBERON:0003902,3.61e-34,1;UBERON:0005425,3.61e-34,1;UBERON:0002135,9.85e-34,1;UBERON:0007100,4.30e-20,27;UBERON:0003714,7.67e-18,2;UBERON:0005162,7.67e-18,2;UBERON:0000122,7.67e-18,2;UBERON:0002133,1.27e-17,2;UBERON:0003978,3.24e-12,3;UBERON:0009751,3.24e-12,3;UBERON:0000946,3.24e-12,3;UBERON:0002523,3.24e-12,3;UBERON:0005983,3.24e-12,3;UBERON:0002165,3.24e-12,3;UBERON:0002062,3.24e-12,3;UBERON:0007280,3.24e-12,3;UBERON:0001781,1.32e-09,4;UBERON:0003103,2.48e-08,68;UBERON:0000966,8.02e-07,6;UBERON:0005388,8.02e-07,6;UBERON:0001802,8.02e-07,6 | |||
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|short_description=p18@TANC1 | |short_description=p18@TANC1 | ||
}} | }} |
Latest revision as of 18:28, 17 September 2015
Short description: | p18@TANC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_TANC1_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | -228bp_to_uc002uah.1_5end |
EntrezGene: | TANC1 |
HGNC: | 29364 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 3.61e-34 | 1 |
cranial nerve | 3.61e-34 | 1 |
nerve trunk | 3.61e-34 | 1 |
nerve connecting eye with brain | 3.61e-34 | 1 |
nerve | 3.61e-34 | 1 |
retinal neural layer | 3.61e-34 | 1 |
presumptive neural retina | 3.61e-34 | 1 |
mitral valve | 9.85e-34 | 1 |
primary circulatory organ | 4.30e-20 | 27 |
neural tissue | 7.67e-18 | 2 |
multi cell component structure | 7.67e-18 | 2 |
neuron projection bundle | 7.67e-18 | 2 |
atrioventricular valve | 1.27e-17 | 2 |
valve | 3.24e-12 | 3 |
cardiac mesenchyme | 3.24e-12 | 3 |
cardial valve | 3.24e-12 | 3 |
tunica intima | 3.24e-12 | 3 |
heart layer | 3.24e-12 | 3 |
endocardium | 3.24e-12 | 3 |
endocardial cushion | 3.24e-12 | 3 |
presumptive endocardium | 3.24e-12 | 3 |
layer of retina | 1.32e-09 | 4 |
compound organ | 2.48e-08 | 68 |
retina | 8.02e-07 | 6 |
photoreceptor array | 8.02e-07 | 6 |
posterior segment of eyeball | 8.02e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
heart disease | 2.03e-66 | 2 |
vascular disease | 7.06e-34 | 1 |
ischemia | 7.06e-34 | 1 |
extrinsic cardiomyopathy | 7.06e-34 | 1 |
myocardial ischemia | 7.06e-34 | 1 |
myocardial infarction | 7.06e-34 | 1 |
cardiovascular system disease | 7.07e-34 | 4 |