FFCP PHASE1:Hg19::chr12:2027790..2027797,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=93589 | |EntrezGene=93589 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20202 | |HGNC=20202 | ||
|TSSclassifier=strong | |||
|UniProt=E7EUE0 | |UniProt=E7EUE0 | ||
|association_with_transcript=5bp_to_ENST00000444595_5end | |association_with_transcript=5bp_to_ENST00000444595_5end | ||
|cluster_id=chr12:2027790..2027797,- | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_10_at_CACNA2D4_5end | |description=CAGE_peak_10_at_CACNA2D4_5end | ||
|id=chr12:2027790..2027797,- | |id=chr12:2027790..2027797,- | ||
|ontology_enrichment_celltype=CL:0000784!4.89e-08!3 | |ontology_enrichment_celltype=CL:0000784!4.89e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000047;3.34e-11;2!CL:0002319;3.30e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,3.23e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0003056;3.56e-27;3!UBERON:0006238;3.89e-08;10 | |||
|ontology_enrichment_disease=DOID:8692!8.17e-10!31;DOID:1240!1.49e-07!39;DOID:8552!9.48e-07!1 | |ontology_enrichment_disease=DOID:8692!8.17e-10!31;DOID:1240!1.49e-07!39;DOID:8552!9.48e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:3093;1.57e-07;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,1.57e-07,11 | |||
|ontology_enrichment_uberon=UBERON:0003296!2.95e-13!4;UBERON:0010133!2.95e-13!4;UBERON:0001905!1.55e-12!2;UBERON:0002757!1.55e-12!2;UBERON:0010134!1.55e-12!2;UBERON:0002784!1.55e-12!2;UBERON:0005408!1.55e-12!2;UBERON:0001899!1.55e-12!2;UBERON:0001894!9.25e-08!7;UBERON:0006222!9.25e-08!7 | |ontology_enrichment_uberon=UBERON:0003296!2.95e-13!4;UBERON:0010133!2.95e-13!4;UBERON:0001905!1.55e-12!2;UBERON:0002757!1.55e-12!2;UBERON:0010134!1.55e-12!2;UBERON:0002784!1.55e-12!2;UBERON:0005408!1.55e-12!2;UBERON:0001899!1.55e-12!2;UBERON:0001894!9.25e-08!7;UBERON:0006222!9.25e-08!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;3.99e-41;2!UBERON:0002757;3.99e-41;2!UBERON:0010134;3.99e-41;2!UBERON:0005408;3.99e-41;2!UBERON:0001899;3.99e-41;2!UBERON:0003296;3.82e-21;4!UBERON:0010133;3.82e-21;4!UBERON:0002784;3.82e-21;4!UBERON:0000966;9.55e-17;5!UBERON:0005388;9.55e-17;5!UBERON:0001802;9.55e-17;5!UBERON:0001894;1.59e-12;7!UBERON:0000970;1.57e-09;20!UBERON:0002104;4.19e-09;21!UBERON:0000020;2.30e-08;23!UBERON:0001032;4.86e-08;24!UBERON:0004456;4.86e-08;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,3.99e-41,2;UBERON:0002757,3.99e-41,2;UBERON:0010134,3.99e-41,2;UBERON:0005408,3.99e-41,2;UBERON:0001899,3.99e-41,2;UBERON:0003296,3.82e-21,4;UBERON:0010133,3.82e-21,4;UBERON:0002784,3.82e-21,4;UBERON:0000966,2.85e-14,6;UBERON:0005388,2.85e-14,6;UBERON:0001802,2.85e-14,6;UBERON:0001894,1.59e-12,7;UBERON:0006222,1.59e-12,7;UBERON:0000970,3.75e-09,21;UBERON:0002104,3.75e-09,21;UBERON:0000020,4.41e-08,24;UBERON:0001032,4.41e-08,24;UBERON:0004456,4.41e-08,24 | |||
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|short_description=p10@CACNA2D4 | |short_description=p10@CACNA2D4 | ||
}} | }} |
Latest revision as of 18:30, 17 September 2015
Short description: | p10@CACNA2D4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_CACNA2D4_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 5bp_to_ENST00000444595_5end |
EntrezGene: | CACNA2D4 |
HGNC: | 20202 |
UniProt: | E7EUE0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 3.23e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
pineal body | 3.99e-41 | 2 |
regional part of epithalamus | 3.99e-41 | 2 |
secretory circumventricular organ | 3.99e-41 | 2 |
circumventricular organ | 3.99e-41 | 2 |
epithalamus | 3.99e-41 | 2 |
gland of diencephalon | 3.82e-21 | 4 |
neuroendocrine gland | 3.82e-21 | 4 |
regional part of diencephalon | 3.82e-21 | 4 |
retina | 2.85e-14 | 6 |
photoreceptor array | 2.85e-14 | 6 |
posterior segment of eyeball | 2.85e-14 | 6 |
diencephalon | 1.59e-12 | 7 |
future diencephalon | 1.59e-12 | 7 |
eye | 3.75e-09 | 21 |
visual system | 3.75e-09 | 21 |
sense organ | 4.41e-08 | 24 |
sensory system | 4.41e-08 | 24 |
entire sense organ system | 4.41e-08 | 24 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 1.57e-07 | 11 |