FFCP PHASE1:Hg19::chr4:40517945..40517950,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54502 | |EntrezGene=54502 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30358 | |HGNC=30358 | ||
|TSSclassifier=strong | |||
|UniProt=A0AV96 | |UniProt=A0AV96 | ||
|association_with_transcript=39bp_to_ENST00000381795,NM_019027,uc003gvd.2_5end | |||
|cluster_id=chr4:40517945..40517950,- | |||
|coexpression_cluster_id=C4410 | |||
|description=CAGE_peak_34_at_RBM47_5end | |||
|id=chr4:40517945..40517950,- | |||
|ontology_enrichment_celltype=CL:0000077!1.78e-13!19;CL:0000066!5.71e-09!254;CL:0002097!9.83e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000239;1.41e-09;3!CL:1000615;1.41e-09;3!CL:0002306;1.41e-09;3!CL:1000497;8.84e-07;17!CL:0002518;8.84e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.81e-09,3;CL:1000615,1.81e-09,3;CL:0002306,1.81e-09,3;CL:1000497,9.10e-07,17;CL:0002518,9.10e-07,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.41e-12!235;DOID:305!4.29e-12!106;DOID:14566!4.30e-12!239;DOID:0050687!1.43e-10!143;DOID:299!1.08e-07!25;DOID:170!1.12e-07!6;DOID:4468!4.10e-07!2;DOID:3493!5.34e-07!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!3.07e-09!35;UBERON:0005172!3.70e-09!55;UBERON:0005173!3.70e-09!55;UBERON:0000160!7.83e-09!27;UBERON:0002417!6.75e-08!61;UBERON:0000916!6.75e-08!61;UBERON:0000059!8.83e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;6.64e-21;4!UBERON:0000160;3.93e-13;17!UBERON:0005409;1.99e-10;22!UBERON:0006853;1.41e-09;3!UBERON:0007685;1.41e-09;3!UBERON:0004134;1.41e-09;3!UBERON:0002114;1.41e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,8.13e-21,4;UBERON:0000160,3.77e-13,17;UBERON:0002114,1.67e-09,2;UBERON:0006853,1.81e-09,3;UBERON:0007685,1.81e-09,3;UBERON:0004134,1.81e-09,3;UBERON:0005409,2.59e-09,25 | |||
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|short_description=p34@RBM47 | |||
}} | }} |
Latest revision as of 18:42, 17 September 2015
Short description: | p34@RBM47 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_34_at_RBM47_5end |
Coexpression cluster: | C4410_small_Mesothelial_signet_kidney_colon_mesothelioma_bile |
Association with transcript: | 39bp_to_ENST00000381795, NM_019027, uc003gvd.2_5end |
EntrezGene: | RBM47 |
HGNC: | 30358 |
UniProt: | A0AV96 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.81e-09 | 3 |
kidney cortex tubule cell | 1.81e-09 | 3 |
epithelial cell of proximal tubule | 1.81e-09 | 3 |
kidney cell | 9.10e-07 | 17 |
kidney epithelial cell | 9.10e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
small intestine | 8.13e-21 | 4 |
intestine | 3.77e-13 | 17 |
duodenum | 1.67e-09 | 2 |
renal cortex tubule | 1.81e-09 | 3 |
region of nephron tubule | 1.81e-09 | 3 |
proximal tubule | 1.81e-09 | 3 |
gastrointestinal system | 2.59e-09 | 25 |