FFCP PHASE1:Hg19::chr9:73483926..73483937,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80036 | |EntrezGene=80036 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17992 | |HGNC=17992 | ||
|TSSclassifier=strong | |||
|UniProt=Q4VXD4 | |UniProt=Q4VXD4 | ||
|association_with_transcript=1bp_to_ENST00000396283_5end | |association_with_transcript=1bp_to_ENST00000396283_5end | ||
|cluster_id=chr9:73483926..73483937,- | |||
|coexpression_cluster_id=C41 | |coexpression_cluster_id=C41 | ||
|description=CAGE_peak_4_at_TRPM3_5end | |description=CAGE_peak_4_at_TRPM3_5end | ||
|id=chr9:73483926..73483937,- | |id=chr9:73483926..73483937,- | ||
|ontology_enrichment_celltype=CL:0002586!1.68e-12!3;CL:0000064!3.67e-12!3;CL:0005012!3.67e-12!3;CL:0000067!3.67e-12!3;CL:0002304!3.67e-12!3;CL:0000149!1.80e-09!4;CL:0000075!3.69e-09!27;CL:0000147!4.77e-09!14;CL:0000710!6.63e-08!20 | |ontology_enrichment_celltype=CL:0002586!1.68e-12!3;CL:0000064!3.67e-12!3;CL:0005012!3.67e-12!3;CL:0000067!3.67e-12!3;CL:0002304!3.67e-12!3;CL:0000149!1.80e-09!4;CL:0000075!3.69e-09!27;CL:0000147!4.77e-09!14;CL:0000710!6.63e-08!20 | ||
|ontology_enrichment_celltype_v019=CL:0002586;7.29e-36;3!CL:0000149;4.31e-27;4!CL:0000064;2.20e-16;3!CL:0000067;2.20e-16;3!CL:0005012;2.20e-16;3!CL:0002304;2.20e-16;3!CL:0000147;3.64e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,6.10e-36,3;CL:0000149,3.78e-27,4;CL:0000064,2.04e-16,3;CL:0000067,2.04e-16,3;CL:0005012,2.04e-16,3;CL:0002304,2.04e-16,3;CL:0000147,3.50e-08,14 | |||
|ontology_enrichment_development_v019=UBERON:0006222;8.15e-13;1!UBERON:0005754;8.15e-13;1!UBERON:0007297;4.83e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p4@TRPM3 | |short_description=p4@TRPM3 | ||
}} | }} |
Latest revision as of 18:44, 17 September 2015
Short description: | p4@TRPM3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TRPM3_5end |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | 1bp_to_ENST00000396283_5end |
EntrezGene: | TRPM3 |
HGNC: | 17992 |
UniProt: | Q4VXD4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 6.10e-36 | 3 |
visual pigment cell | 3.78e-27 | 4 |
ciliated cell | 2.04e-16 | 3 |
ciliated epithelial cell | 2.04e-16 | 3 |
multi-ciliated epithelial cell | 2.04e-16 | 3 |
non-pigmented ciliary epithelial cell | 2.04e-16 | 3 |
pigment cell | 3.50e-08 | 14 |