FFCP PHASE1:Hg19::chr4:41750793..41750804,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8929 | |EntrezGene=8929 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9143 | |HGNC=9143 | ||
|TSSclassifier=strong | |||
|UniProt=Q99453 | |UniProt=Q99453 | ||
|association_with_transcript=182bp_to_ENST00000226382,NM_003924,uc003gwf.3_5end | |association_with_transcript=182bp_to_ENST00000226382,NM_003924,uc003gwf.3_5end | ||
|cluster_id=chr4:41750793..41750804,- | |||
|coexpression_cluster_id=C145 | |||
|description=CAGE_peak_5_at_PHOX2B_5end | |description=CAGE_peak_5_at_PHOX2B_5end | ||
|id=chr4:41750793..41750804,- | |id=chr4:41750793..41750804,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000333;6.18e-71;5!CL:0002321;4.41e-24;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000333,1.11e-08,41 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:169!1.84e-23!6;DOID:171!3.61e-14!10 | |||
|ontology_enrichment_disease_v019=DOID:169;3.05e-59;6!DOID:171;7.99e-36;10!DOID:3095;1.39e-16;22!DOID:2994;1.39e-16;22!DOID:5409;7.69e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:169,3.05e-59,6;DOID:171,8.00e-36,10;DOID:3095,1.39e-16,22;DOID:2994,1.39e-16,22;DOID:5409,7.70e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0000013!4.28e-28!5;UBERON:0002410!4.28e-28!5;UBERON:0002298!1.21e-25!8;UBERON:0001896!3.97e-25!3;UBERON:0005290!3.97e-25!3;UBERON:0010096!3.97e-25!3;UBERON:0004733!2.73e-24!12;UBERON:0002028!2.73e-24!12;UBERON:0007277!2.73e-24!12;UBERON:0004732!2.15e-22!13;UBERON:0003076!2.33e-19!15;UBERON:0003057!2.33e-19!15;UBERON:0002148!1.04e-17!2;UBERON:0009662!1.04e-17!2;UBERON:0000010!1.01e-15!8;UBERON:0000988!3.99e-12!3;UBERON:0006331!3.99e-12!3;UBERON:0000160!2.83e-10!27;UBERON:0002680!6.68e-09!9;UBERON:0001895!6.68e-09!9;UBERON:0010092!6.68e-09!9;UBERON:0000073!1.09e-08!94;UBERON:0001016!1.09e-08!94;UBERON:0000063!1.54e-08!97;UBERON:0005409!6.94e-08!35;UBERON:0000059!2.14e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;6.18e-71;5!UBERON:0002410;6.18e-71;5!UBERON:0000010;9.89e-40;8!UBERON:0000160;1.41e-11;17!UBERON:0005409;3.35e-09;22!UBERON:0000059;6.61e-09;11!UBERON:0004921;7.50e-07;33!UBERON:0001052;9.36e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,6.18e-71,5;UBERON:0002410,6.18e-71,5;UBERON:0000010,9.90e-40,8;UBERON:0000160,1.33e-11,17;UBERON:0000059,6.10e-09,11;UBERON:0005409,3.16e-08,25;UBERON:0011216,1.33e-07,223;UBERON:0001052,9.11e-07,4 | |||
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|short_description=p5@PHOX2B | |short_description=p5@PHOX2B | ||
}} | }} |
Latest revision as of 19:55, 17 September 2015
Short description: | p5@PHOX2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PHOX2B_5end |
Coexpression cluster: | C145_neuroblastoma_peripheral_neuroectodermal_neuroepithelioma_carcinoid_adult_extraskeletal |
Association with transcript: | 182bp_to_ENST00000226382, NM_003924, uc003gwf.3_5end |
EntrezGene: | PHOX2B |
HGNC: | 9143 |
UniProt: | Q99453 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 1.11e-08 | 41 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 6.18e-71 | 5 |
autonomic nervous system | 6.18e-71 | 5 |
peripheral nervous system | 9.90e-40 | 8 |
intestine | 1.33e-11 | 17 |
large intestine | 6.10e-09 | 11 |
gastrointestinal system | 3.16e-08 | 25 |
organ system subdivision | 1.33e-07 | 223 |
rectum | 9.11e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 3.05e-59 | 6 |
neuroectodermal tumor | 8.00e-36 | 10 |
germ cell and embryonal cancer | 1.39e-16 | 22 |
germ cell cancer | 1.39e-16 | 22 |
lung small cell carcinoma | 7.70e-07 | 4 |