FFCP PHASE1:Hg19::chr19:39226271..39226282,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:39226271..39226282,-
|short_description=p3@CAPN12
|description=CAGE_peak_3_at_CAPN12_5end
|association_with_transcript=34bp_to_uc002ojc.1_5end
|EntrezGen...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=147968 | |EntrezGene=147968 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13249 | |HGNC=13249 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=34bp_to_uc002ojc.1_5end | |||
|cluster_id=chr19:39226271..39226282,- | |||
|description=CAGE_peak_3_at_CAPN12_5end | |||
|id=chr19:39226271..39226282,- | |||
|ontology_enrichment_celltype=CL:0002076!3.12e-08!43;CL:0000223!6.64e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002231;2.98e-09;3!CL:0002127;9.08e-08;1!CL:0000911;9.08e-08;1!CL:0002252;9.08e-08;1!CL:0000814;9.08e-08;1!CL:0000236;1.37e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002231,5.29e-09,3;CL:0002252,8.54e-08,1;CL:0002127,9.71e-08,1;CL:0000914,9.71e-08,1;CL:0000911,9.71e-08,1;CL:0000814,9.71e-08,1;CL:0002042,9.71e-08,1;CL:0002039,9.71e-08,1;CL:0002040,9.71e-08,1;CL:0002041,9.71e-08,1;CL:0000236,3.25e-07,14 | |||
|ontology_enrichment_development_v019=UBERON:0008801;2.34e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:6193;2.34e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,2.66e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.18e-08!169;UBERON:0000925!1.18e-08!169;UBERON:0006595!1.18e-08!169;UBERON:0006554!1.32e-08!44;UBERON:0001008!2.83e-08!45;UBERON:0000464!6.23e-07!104 | |||
|ontology_enrichment_uberon_v019=UBERON:0001831;2.34e-07;1!UBERON:0001567;2.34e-07;1!UBERON:0001041;3.69e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001831,3.62e-07,1;UBERON:0001567,3.62e-07,1;UBERON:0008801,3.62e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.436882744260345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,0,0,0,0,0.30120591877825,1.10926203050036,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22465726229299,0,0,0,0,0,1.75996244461323,1.63841583378639,0,0.426730222566507,1.20118796110804,0,0,1.90810750907073,0,0,0.382273228125229,0,0,0,0,0,0,0.83593247695339,0,0,0,1.11410456885174,0.294605907474837,0.221533894583621,0,1.0247305578054,0.780356085359269,1.64437904603676,1.38175008892924,2.31842468588042,0.14828656316206,0,0,1.13309342697566,0.383220493601921,0.34362744548263,0,0,1.30216690771284,0,0.602300476311091,0.383959833463255,0,0.236777252044017,0,0.201606743224732,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0.443458794925128,0,0.196468613246569,0.728590576585084,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61656431285521,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773043412653187,0.272746120590835,0.286804595389004,0.243947412259191,0.662648841607426,0.464775771478074,0.207322110030741,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,3.73150970389327,0,0,0.555530670951178,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87467667973554,0,0.425325291727159,0,0,0,0.492663237895943,0.176096868026452,0.207328115540772,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12961773587702,0.591092280605782,1.07813787429759,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0.195801157462741,0,0.413536052245775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00253235151642,2.11786274552562,0,0.182091168006717,0,0,0.693138033939733,0.784349769176855,1.46139224653261,0.316654886678627,0,0,0.215915916102139,0,0.812839312631559,0,0.509752546090077,0,0.447749509444357,0,0,0,0,0,0,0,0,1.72279661398852,0,0,0,0,0,0,0,0,0,0,0.495854746082934,0,0.893288987462089,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48111056362756,0.670302275535787,1.08890984861323,0,0.43050537267123,1.68471475667626,0.443430153536676,0.689170200620878,0.507447609232169,0,0.569647187174163,0.476463550915578,0.411362273086194,0,1.08006287447623,0,0.106824071127473,0,0,0.185803175125719,0,0,0,0.399158742865633,0.383010740264733,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935702702041099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.11748701753901,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0.0897576444097721,0.325942115766024,0.31900115973192,0.0915975934018623,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.17472666824203,1.20390222730132,0,0,0,0,0,0,0,0,0,0.782205530939212,0,0.213452994739353,1.79828648623917,0.144090417154106,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0.160753148465019,0.275078873194468,0.415440338029185,0,0,0,0,1.33969702408637,0.629455057619977,0,0,0.959575986597226,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0.342173675768659,2.81926008926669,0,0,0,0,1.38328142328561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0.132864840313363,0.327130788511688,0,0,0.211312123358627,0,0,0,0,0,0.559518030877778,3.73246356019784,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0.115525666150338,0,0,0,0,0,0,0.261906694481422,0,0.147856086217045,0,0,0,0,0,1.09651553371436,0,0,0,0,0,0,0,0,0.115233987555779,0,0.339848664884159,0,0,0.111231401892069,0.078493092850514,0,0.560544326627578,0,0,0,0.0714765441766563,0.158013611732727,0.116241425368125,0,0,0.207216164163037,0,0,1.29068207646083,0,0,0,0,0,0,0.111855431797792,0,0.243835849964539,0,0,0,0,0,0,0,0,0,0.301925687133347,0.231522474323834,0.874238242015829,0.470317296361523,0,0.235676547101626,0,0,0,0,0.657887425858975,0.322289439867886,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0.101988829741982,0,0.0918948995348449,0.752122617877125,0,0,0,0,0.213233981900981,0,0,0.0620747142958579,0,0.0636471582781649,0,0.217716747896961,0,0.336760265072938,0.215166616178029,0.332660356546013,0,0.747091421144008,0,0.269475606319761,0,0,0,0,0.603821380773079,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.436882744260345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,0,0,0,0,0.30120591877825,1.10926203050036,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22465726229299,0,0,0,0,0,1.75996244461323,1.63841583378639,0,0.426730222566507,1.20118796110804,0,0,1.90810750907073,0,0,0.382273228125229,0,0,0,0,0,0,0.83593247695339,0,0,0,1.11410456885174,0.294605907474837,0.221533894583621,0,1.0247305578054,0.780356085359269,1.64437904603676,1.38175008892924,2.31842468588042,0.14828656316206,0,0,1.13309342697566,0.383220493601921,0.34362744548263,0,0,1.30216690771284,0,0.602300476311091,0.383959833463255,0,0.236777252044017,0,0.201606743224732,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0.443458794925128,0,0.196468613246569,0.728590576585084,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61656431285521,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773043412653187,0.272746120590835,0.286804595389004,0.243947412259191,0.662648841607426,0.464775771478074,0.207322110030741,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,3.73150970389327,0,0,0.555530670951178,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87467667973554,0,0.425325291727159,0,0,0,0.492663237895943,0.176096868026452,0.207328115540772,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12961773587702,0.591092280605782,1.07813787429759,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0.195801157462741,0,0.413536052245775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00253235151642,2.11786274552562,0,0.182091168006717,0,0,0.693138033939733,0.784349769176855,1.46139224653261,0.316654886678627,0,0,0.215915916102139,0,0.812839312631559,0,0.509752546090077,0,0.447749509444357,0,0,0,0,0,0,0,0,1.72279661398852,0,0,0,0,0,0,0,0,0,0,0.495854746082934,0,0.893288987462089,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48111056362756,0.670302275535787,1.08890984861323,0,0.43050537267123,1.68471475667626,0.443430153536676,0.689170200620878,0.507447609232169,0,0.569647187174163,0.476463550915578,0.411362273086194,0,1.08006287447623,0,0.106824071127473,0,0,0.185803175125719,0,0,0,0.399158742865633,0.383010740264733,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935702702041099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.11748701753901,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0.0897576444097721,0.325942115766024,0.31900115973192,0.0915975934018623,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.17472666824203,1.20390222730132,0,0,0,0,0,0,0,0,0,0.782205530939212,0,0.213452994739353,1.79828648623917,0.144090417154106,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0.160753148465019,0.275078873194468,0.415440338029185,0,0,0,0,1.33969702408637,0.629455057619977,0,0,0.959575986597226,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0.342173675768659,2.81926008926669,0,0,0,0,1.38328142328561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0.132864840313363,0.327130788511688,0,0,0.211312123358627,0,0,0,0,0,0.559518030877778,3.73246356019784,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0.115525666150338,0,0,0,0,0,0,0.261906694481422,0,0.147856086217045,0,0,0,0,0,1.09651553371436,0,0,0,0,0,0,0,0,0.115233987555779,0,0.339848664884159,0,0,0.111231401892069,0.078493092850514,0,0.560544326627578,0,0,0,0.0714765441766563,0.158013611732727,0.116241425368125,0,0,0.207216164163037,0,0,1.29068207646083,0,0,0,0,0,0,0.111855431797792,0,0.243835849964539,0,0,0,0,0,0,0,0,0,0.301925687133347,0.231522474323834,0.874238242015829,0.470317296361523,0,0.235676547101626,0,0,0,0,0.657887425858975,0.322289439867886,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0.101988829741982,0,0.0918948995348449,0.752122617877125,0,0,0,0,0.213233981900981,0,0,0.0620747142958579,0,0.0636471582781649,0,0.217716747896961,0,0.336760265072938,0.215166616178029,0.332660356546013,0,0.747091421144008,0,0.269475606319761,0,0,0,0,0.603821380773079,0 | ||
|short_description=p3@CAPN12 | |||
}} | }} |
Latest revision as of 20:26, 17 September 2015
Short description: | p3@CAPN12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CAPN12_5end |
Coexpression cluster: | NA |
Association with transcript: | 34bp_to_uc002ojc.1_5end |
EntrezGene: | CAPN12 |
HGNC: | 13249 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of prostate | 5.29e-09 | 3 |
epithelial cell of esophagus | 8.54e-08 | 1 |
innate effector T cell | 9.71e-08 | 1 |
immature NK T cell | 9.71e-08 | 1 |
effector T cell | 9.71e-08 | 1 |
mature NK T cell | 9.71e-08 | 1 |
immature NK T cell stage IV | 9.71e-08 | 1 |
immature NK T cell stage I | 9.71e-08 | 1 |
immature NK T cell stage II | 9.71e-08 | 1 |
immature NK T cell stage III | 9.71e-08 | 1 |
B cell | 3.25e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
parotid gland | 3.62e-07 | 1 |
cheek | 3.62e-07 | 1 |
parotid gland primordium | 3.62e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 2.66e-07 | 1 |