FFCP PHASE1:Hg19::chr2:162272785..162272836,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10716 | |EntrezGene=10716 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11590 | |HGNC=11590 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-5bp_to_ENST00000463544_5end | |association_with_transcript=-5bp_to_ENST00000463544_5end | ||
|cluster_id=chr2:162272785..162272836,+ | |||
|coexpression_cluster_id=C10 | |coexpression_cluster_id=C10 | ||
|description=CAGE_peak_1_at_TBR1_5end | |description=CAGE_peak_1_at_TBR1_5end | ||
|id=chr2:162272785..162272836,+ | |id=chr2:162272785..162272836,+ | ||
|ontology_enrichment_celltype=CL:0000047!4.32e-09!8 | |ontology_enrichment_celltype=CL:0000047!4.32e-09!8 | ||
|ontology_enrichment_celltype_v019=CL:0000047;1.28e-09;2!CL:0000540;4.14e-07;6!CL:0000404;4.14e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,2.01e-13,8;CL:0000540,4.14e-07,6;CL:0000031,4.14e-07,6;CL:0000404,4.14e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.72e-11;82!CL:0000031;4.14e-07;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!1.83e-58!22;UBERON:0001893!3.79e-55!34;UBERON:0001869!1.37e-54!32;UBERON:0001950!2.20e-53!20;UBERON:0002791!1.36e-52!33;UBERON:0001017!5.62e-51!82;UBERON:0000956!5.93e-51!25;UBERON:0000203!5.93e-51!25;UBERON:0002020!1.27e-50!34;UBERON:0003528!1.27e-50!34;UBERON:0005743!3.98e-48!86;UBERON:0002780!5.11e-48!41;UBERON:0001890!5.11e-48!41;UBERON:0006240!5.11e-48!41;UBERON:0003080!1.04e-46!42;UBERON:0000073!7.71e-45!94;UBERON:0001016!7.71e-45!94;UBERON:0001049!3.21e-40!57;UBERON:0005068!3.21e-40!57;UBERON:0006241!3.21e-40!57;UBERON:0007135!3.21e-40!57;UBERON:0000955!4.97e-39!69;UBERON:0006238!4.97e-39!69;UBERON:0002616!5.06e-36!59;UBERON:0003056!3.02e-32!61;UBERON:0002346!1.86e-31!90;UBERON:0003075!2.07e-31!86;UBERON:0007284!2.07e-31!86;UBERON:0000924!1.18e-25!173;UBERON:0006601!1.18e-25!173;UBERON:0004121!3.09e-25!169;UBERON:0007023!1.29e-22!115;UBERON:0000033!7.78e-21!123;UBERON:0000153!1.96e-19!129;UBERON:0007811!1.96e-19!129;UBERON:0000200!6.54e-18!6;UBERON:0001871!9.16e-18!7;UBERON:0001872!1.84e-15!5;UBERON:0002021!2.38e-15!5;UBERON:0000349!2.33e-14!5;UBERON:0002771!9.51e-10!3;UBERON:0000025!3.58e-08!194;UBERON:0002420!1.41e-07!9;UBERON:0007245!1.41e-07!9;UBERON:0010009!1.41e-07!9;UBERON:0010011!1.41e-07!9;UBERON:0000454!1.41e-07!9;UBERON:0001870!4.02e-07!2;UBERON:0001876!7.62e-07!2 | |ontology_enrichment_uberon=UBERON:0002619!1.83e-58!22;UBERON:0001893!3.79e-55!34;UBERON:0001869!1.37e-54!32;UBERON:0001950!2.20e-53!20;UBERON:0002791!1.36e-52!33;UBERON:0001017!5.62e-51!82;UBERON:0000956!5.93e-51!25;UBERON:0000203!5.93e-51!25;UBERON:0002020!1.27e-50!34;UBERON:0003528!1.27e-50!34;UBERON:0005743!3.98e-48!86;UBERON:0002780!5.11e-48!41;UBERON:0001890!5.11e-48!41;UBERON:0006240!5.11e-48!41;UBERON:0003080!1.04e-46!42;UBERON:0000073!7.71e-45!94;UBERON:0001016!7.71e-45!94;UBERON:0001049!3.21e-40!57;UBERON:0005068!3.21e-40!57;UBERON:0006241!3.21e-40!57;UBERON:0007135!3.21e-40!57;UBERON:0000955!4.97e-39!69;UBERON:0006238!4.97e-39!69;UBERON:0002616!5.06e-36!59;UBERON:0003056!3.02e-32!61;UBERON:0002346!1.86e-31!90;UBERON:0003075!2.07e-31!86;UBERON:0007284!2.07e-31!86;UBERON:0000924!1.18e-25!173;UBERON:0006601!1.18e-25!173;UBERON:0004121!3.09e-25!169;UBERON:0007023!1.29e-22!115;UBERON:0000033!7.78e-21!123;UBERON:0000153!1.96e-19!129;UBERON:0007811!1.96e-19!129;UBERON:0000200!6.54e-18!6;UBERON:0001871!9.16e-18!7;UBERON:0001872!1.84e-15!5;UBERON:0002021!2.38e-15!5;UBERON:0000349!2.33e-14!5;UBERON:0002771!9.51e-10!3;UBERON:0000025!3.58e-08!194;UBERON:0002420!1.41e-07!9;UBERON:0007245!1.41e-07!9;UBERON:0010009!1.41e-07!9;UBERON:0010011!1.41e-07!9;UBERON:0000454!1.41e-07!9;UBERON:0001870!4.02e-07!2;UBERON:0001876!7.62e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.41e-88;22!UBERON:0001950;1.33e-80;20!UBERON:0000956;1.60e-77;25!UBERON:0000203;1.60e-77;25!UBERON:0001869;7.34e-64;32!UBERON:0001893;5.42e-63;34!UBERON:0002791;6.95e-58;32!UBERON:0003528;7.57e-54;34!UBERON:0002020;7.57e-54;34!UBERON:0002780;5.83e-43;41!UBERON:0001890;5.83e-43;41!UBERON:0000073;6.32e-29;53!UBERON:0002616;6.32e-29;53!UBERON:0000200;2.42e-26;6!UBERON:0001017;4.74e-24;75!UBERON:0001872;1.24e-22;5!UBERON:0002021;1.89e-22;5!UBERON:0001871;2.13e-22;6!UBERON:0000955;4.01e-21;68!UBERON:0000349;6.00e-21;5!UBERON:0001016;2.89e-20;83!UBERON:0001870;5.13e-14;3!UBERON:0002702;5.30e-10;2!UBERON:0002771;6.20e-10;2!UBERON:0001876;1.42e-09;2!UBERON:0001954;2.96e-09;2!UBERON:0003022;2.96e-09;2!UBERON:0002421;2.96e-09;2!UBERON:0002600;2.96e-09;2!UBERON:0002360;3.73e-09;2!UBERON:0000094;3.73e-09;2!UBERON:0010743;3.73e-09;2!UBERON:0011216;6.27e-09;132!UBERON:0007023;2.94e-07;114!UBERON:0002114;9.97e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,2.41e-88,22;UBERON:0001950,1.33e-80,20;UBERON:0000956,1.60e-77,25;UBERON:0000203,1.60e-77,25;UBERON:0001893,7.11e-73,34;UBERON:0001869,1.30e-71,32;UBERON:0002791,1.38e-65,32;UBERON:0001017,2.20e-64,81;UBERON:0003528,1.63e-61,34;UBERON:0002020,1.63e-61,34;UBERON:0002780,1.04e-59,41;UBERON:0001890,1.04e-59,41;UBERON:0003080,1.04e-59,41;UBERON:0006240,1.04e-59,41;UBERON:0001016,2.71e-57,89;UBERON:0000955,9.43e-50,68;UBERON:0006238,9.43e-50,68;UBERON:0000073,7.81e-49,53;UBERON:0002616,7.81e-49,53;UBERON:0001049,6.25e-46,56;UBERON:0005068,6.25e-46,56;UBERON:0006241,6.25e-46,56;UBERON:0007135,6.25e-46,56;UBERON:0003056,1.06e-41,61;UBERON:0003075,5.01e-32,82;UBERON:0007284,5.01e-32,82;UBERON:0002346,2.96e-30,86;UBERON:0004121,3.81e-28,171;UBERON:0000924,3.81e-28,171;UBERON:0006601,3.81e-28,171;UBERON:0000200,2.42e-26,6;UBERON:0010371,5.85e-24,104;UBERON:0001872,1.27e-22,5;UBERON:0011216,1.57e-22,223;UBERON:0002021,1.89e-22,5;UBERON:0001871,2.13e-22,6;UBERON:0007023,2.85e-21,114;UBERON:0000349,6.00e-21,5;UBERON:0010314,8.81e-21,132;UBERON:0001870,5.13e-14,3;UBERON:0002702,5.19e-10,2;UBERON:0002771,6.20e-10,2;UBERON:0001876,1.42e-09,2;UBERON:0001954,2.96e-09,2;UBERON:0003022,2.96e-09,2;UBERON:0002421,2.96e-09,2;UBERON:0002600,2.96e-09,2;UBERON:0000025,3.07e-09,192;UBERON:0002360,3.66e-09,2;UBERON:0000094,3.66e-09,2;UBERON:0010743,3.66e-09,2 | |||
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|short_description=p1@TBR1 | |short_description=p1@TBR1 | ||
}} | }} |
Latest revision as of 20:33, 17 September 2015
Short description: | p1@TBR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TBR1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -5bp_to_ENST00000463544_5end |
EntrezGene: | TBR1 |
HGNC: | 11590 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 2.01e-13 | 8 |
neuron | 4.14e-07 | 6 |
neuroblast | 4.14e-07 | 6 |
electrically signaling cell | 4.14e-07 | 6 |