FFCP PHASE1:Hg19::chr7:23387355..23387366,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10643 | |EntrezGene=10643 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28868 | |HGNC=28868 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-2bp_to_uc003swf.2_5end | |association_with_transcript=-2bp_to_uc003swf.2_5end | ||
|cluster_id=chr7:23387355..23387366,- | |||
|coexpression_cluster_id=C4676 | |||
|description=CAGE_peak_8_at_IGF2BP3_5end | |description=CAGE_peak_8_at_IGF2BP3_5end | ||
|id=chr7:23387355..23387366,- | |id=chr7:23387355..23387366,- | ||
|ontology_enrichment_celltype=CL:0000220!2.14e-15!246;CL:0002321!5.22e-15!248;CL:0000222!1.18e-14!119;CL:0002139!4.22e-12!24;CL:0000055!7.55e-12!180;CL:0000359!1.98e-11!32;CL:0000115!2.66e-11!35;CL:0000012!3.92e-11!682;CL:0000548!5.50e-11!679;CL:0000004!5.50e-11!679;CL:0000255!5.50e-11!679;CL:0000213!3.42e-10!57;CL:0000215!3.42e-10!57;CL:0000071!4.01e-10!18;CL:0002546!4.01e-10!18;CL:0000144!1.46e-09!625;CL:0000003!1.75e-09!722;CL:0000192!4.82e-08!42;CL:0000514!4.82e-08!42;CL:1000413!4.98e-08!9;CL:0002078!5.02e-08!44;CL:0002371!6.46e-08!591;CL:0000057!1.92e-07!75;CL:0002539!3.11e-07!10;CL:0002543!6.98e-07!6 | |ontology_enrichment_celltype=CL:0000220!2.14e-15!246;CL:0002321!5.22e-15!248;CL:0000222!1.18e-14!119;CL:0002139!4.22e-12!24;CL:0000055!7.55e-12!180;CL:0000359!1.98e-11!32;CL:0000115!2.66e-11!35;CL:0000012!3.92e-11!682;CL:0000548!5.50e-11!679;CL:0000004!5.50e-11!679;CL:0000255!5.50e-11!679;CL:0000213!3.42e-10!57;CL:0000215!3.42e-10!57;CL:0000071!4.01e-10!18;CL:0002546!4.01e-10!18;CL:0000144!1.46e-09!625;CL:0000003!1.75e-09!722;CL:0000192!4.82e-08!42;CL:0000514!4.82e-08!42;CL:1000413!4.98e-08!9;CL:0002078!5.02e-08!44;CL:0002371!6.46e-08!591;CL:0000057!1.92e-07!75;CL:0002539!3.11e-07!10;CL:0002543!6.98e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002543;1.15e-12;6!CL:0002139;2.82e-12;24!CL:0000071;4.32e-12;18!CL:0000115;4.71e-11;36!CL:0000359;8.04e-10;32!CL:0002618;1.71e-07;3!CL:0002582;5.29e-07;3!CL:0002539;5.31e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002543,7.10e-13,6;CL:0000115,7.89e-13,36;CL:0002139,2.39e-12,24;CL:0000222,2.51e-12,121;CL:0000071,3.61e-12,18;CL:0002546,3.61e-12,18;CL:0000359,8.51e-11,32;CL:0002078,2.19e-09,45;CL:0000213,2.36e-09,58;CL:0000215,2.36e-09,58;CL:0002321,1.60e-08,250;CL:0002618,1.86e-07,3;CL:0002582,3.05e-07,3;CL:0000192,3.95e-07,43;CL:0000514,3.95e-07,43;CL:0002539,4.48e-07,10;CL:0000064,8.69e-07,3;CL:0000067,8.69e-07,3;CL:0005012,8.69e-07,3;CL:0002304,8.69e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;4.32e-12;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!3.86e-21!110;UBERON:0002049!7.03e-21!79;UBERON:0007798!7.03e-21!79;UBERON:0001009!6.13e-20!113;UBERON:0001637!4.46e-18!42;UBERON:0003509!4.46e-18!42;UBERON:0004572!4.46e-18!42;UBERON:0000055!5.32e-17!69;UBERON:0001981!2.41e-15!60;UBERON:0007500!2.41e-15!60;UBERON:0004537!2.41e-15!60;UBERON:0006965!2.41e-15!60;UBERON:0004573!6.13e-15!33;UBERON:0004571!6.13e-15!33;UBERON:0004872!9.57e-13!84;UBERON:0001986!4.01e-10!18;UBERON:0004638!4.01e-10!18;UBERON:0004852!4.01e-10!18;UBERON:0000914!7.73e-10!83;UBERON:0002329!7.73e-10!83;UBERON:0003077!7.73e-10!83;UBERON:0003059!7.73e-10!83;UBERON:0007282!7.73e-10!83;UBERON:0009618!7.73e-10!83;UBERON:0007285!7.73e-10!83;UBERON:0000947!1.89e-09!21;UBERON:0010191!1.89e-09!21;UBERON:0004290!1.51e-08!70;UBERON:0000487!1.61e-08!22;UBERON:0002067!4.94e-08!9;UBERON:0004016!4.94e-08!9;UBERON:0010083!4.94e-08!9;UBERON:0003915!4.98e-08!9;UBERON:0004700!4.98e-08!9;UBERON:0001917!4.98e-08!9;UBERON:0000486!1.01e-07!82;UBERON:0003914!1.82e-07!118;UBERON:0000490!2.45e-07!138;UBERON:0004237!3.11e-07!10;UBERON:0004695!3.11e-07!10;UBERON:0002111!3.11e-07!10;UBERON:0004178!3.11e-07!10;UBERON:0006914!7.40e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0002203;2.46e-12;6!UBERON:0001768;2.46e-12;6!UBERON:0002200;2.46e-12;6!UBERON:0004638;4.32e-12;18!UBERON:0001986;4.32e-12;18!UBERON:0004852;4.32e-12;18!UBERON:0004573;5.52e-12;33!UBERON:0004571;5.52e-12;33!UBERON:0002049;2.41e-11;75!UBERON:0007798;2.41e-11;75!UBERON:0000487;3.23e-11;22!UBERON:0007625;4.83e-11;11!UBERON:0001801;1.16e-10;14!UBERON:0001637;2.37e-10;42!UBERON:0003509;2.37e-10;42!UBERON:0004572;2.37e-10;42!UBERON:0000490;3.13e-10;33!UBERON:0001456;1.15e-09;21!UBERON:0006914;1.57e-09;25!UBERON:0000019;4.66e-09;19!UBERON:0000047;4.66e-09;19!UBERON:0004088;4.66e-09;19!UBERON:0010230;4.66e-09;19!UBERON:0000488;7.16e-09;4!UBERON:0007500;1.30e-08;56!UBERON:0001981;1.30e-08;56!UBERON:0004537;1.30e-08;56!UBERON:0000970;1.69e-08;20!UBERON:0001264;2.45e-08;10!UBERON:0000055;3.13e-08;65!UBERON:0001638;3.68e-08;9!UBERON:0003920;3.68e-08;9!UBERON:0004582;3.68e-08;9!UBERON:0002104;5.40e-08;21!UBERON:0001009;1.98e-07;112!UBERON:0000020;4.04e-07;23!UBERON:0004237;5.31e-07;10!UBERON:0004695;5.31e-07;10!UBERON:0002111;5.31e-07;10!UBERON:0004178;5.31e-07;10!UBERON:0001444;6.52e-07;48!UBERON:0001032;9.72e-07;24!UBERON:0004456;9.72e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,1.05e-21,78;UBERON:0007798,1.05e-21,78;UBERON:0004535,1.36e-19,109;UBERON:0001009,9.08e-19,112;UBERON:0007500,9.42e-17,59;UBERON:0001981,9.42e-17,59;UBERON:0004537,9.42e-17,59;UBERON:0006965,9.42e-17,59;UBERON:0000055,1.72e-16,68;UBERON:0001637,2.44e-14,42;UBERON:0003509,2.44e-14,42;UBERON:0004572,2.44e-14,42;UBERON:0002203,2.19e-12,6;UBERON:0001768,2.19e-12,6;UBERON:0002200,2.19e-12,6;UBERON:0004638,3.61e-12,18;UBERON:0001986,3.61e-12,18;UBERON:0004852,3.61e-12,18;UBERON:0004573,3.72e-12,33;UBERON:0004571,3.72e-12,33;UBERON:0004872,6.92e-12,83;UBERON:0000487,3.54e-11,22;UBERON:0007625,7.47e-11,11;UBERON:0001801,1.34e-10,14;UBERON:0000490,6.57e-10,148;UBERON:0006914,1.70e-09,25;UBERON:0001456,4.84e-09,22;UBERON:0000488,5.81e-09,4;UBERON:0003914,1.72e-08,117;UBERON:0001444,1.79e-08,49;UBERON:0000019,2.32e-08,20;UBERON:0000047,2.32e-08,20;UBERON:0010312,2.32e-08,20;UBERON:0004088,2.32e-08,20;UBERON:0010230,2.32e-08,20;UBERON:0003072,2.32e-08,20;UBERON:0004128,2.32e-08,20;UBERON:0003071,2.32e-08,20;UBERON:0001264,2.45e-08,10;UBERON:0001638,2.70e-08,9;UBERON:0003920,2.70e-08,9;UBERON:0004582,2.70e-08,9;UBERON:0000970,7.27e-08,21;UBERON:0002104,7.27e-08,21;UBERON:0004237,4.48e-07,10;UBERON:0004695,4.48e-07,10;UBERON:0002111,4.48e-07,10;UBERON:0004178,4.48e-07,10;UBERON:0007503,4.67e-07,78;UBERON:0007524,4.80e-07,73;UBERON:0005085,5.67e-07,31;UBERON:0000033,6.64e-07,56;UBERON:0001778,8.69e-07,3;UBERON:0001775,8.69e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.37129905888014,0,3.36162573225888,2.41077811209591,0.730310090387373,2.43966399395253,0.369363174230364,0.408001382488506,0,0.286235987131057,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0.200544447470142,0,0,0.647787332037959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0.622822248995575,0.251248665256743,0,0,0.605399502633369,0,0,0,0,0.419317291016752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,1.22895262313288,1.77383517970051,2.54720878510066,0,0,0,0,0,0,0,0,0,0.596287222100115,0.860234595106124,1.04142150482278,1.13061588384802,0.838998872419812,3.85165258716094,1.8809546988313,3.35941786920128,3.91342888955381,0.66944122552934,0,0,0,4.41195696415042,0.81014194788176,3.75058858793135,2.46982309888787,2.0270066486998,1.53316637465883,1.89853131913626,3.66403487860815,0,0,0,0,0.379891534993739,0.264818361626438,0,0,0,0,0.74000264525148,0,0,0.326923806226917,0,0,0.468642863667593,1.87296046098192,0.570471821544449,2.54062756938062,0.704606991862589,0.809364721840658,2.24721290723598,8.37032102145062,5.89604723096486,1.96318984233954,0,0.494533858557114,0.910161361938026,0,6.06010010234638,3.62843707628696,9.42017992646222,0,0,0,0.680593098960126,0.179389635688862,0,0,0.900273288253207,0.206105058476878,0,0.18611685633159,0.168776332241266,0,0,0.184099797284599,0.161646056818812,0.355009592516614,0.403008392910561,0.169560592310488,0,0.818238361772504,0.286804595389004,0,0,0,0,0,0,1.56449532329816,0.643240938192885,2.76269842704961,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0,6.51957679134397,0,0,0,0,0.651616610620649,0,7.21656710126366,1.39116485970092,1.17408694235822,0.144366447761074,0,0.190254152234598,0,0,0.246217006087397,0,0,0,0.16798212819886,0.141775097242386,0.358234090811393,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0.308482478109971,0.300343057843917,0,0.224262168690721,0,2.933531432838,0.387815147273333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,0,0,0,0.205476322550383,0,0,0,0,0,4.06551398755941,0,0,0.335032530668698,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0.157702415033935,0,0,0,1.03473071292505,0,0,0.60818530127658,0,0,0,0.431428401637234,0.106727557803444,0,0,0.30239029332968,0,0,0,0,0,0,0,1.69630663182921,1.24293207719189,1.97105174433142,8.82732529612156,1.51073491997947,0.120859449591622,0,0,0,0.546273504020151,0.131124414959424,0,0,0,0,0,2.27466768141793,1.19065593693561,0.647747748306418,0,0,0,0,0,0,0,0,1.02580050046556,0,0.325378394664303,0,0,0.082509499920588,0.574265537996172,0,0,0,0,0,0,0.214840489736547,0,0.0852266274161009,0,0.165284915360978,0,0,0,1.85938219718914,1.5740617341532,0.6970372701606,1.23213432070436,0,0.869932992075073,2.7798632865588,1.71749864090389,0,0.316379424718726,0.190630193923825,0,0,1.27281299170375,0.78494864019923,0.179872457583315,0,0.117812402345686,0.808729926293264,0,2.10629228119491,0,1.70599442741899,0,0,0,0,0.551365343546124,3.3171948762061,1.75380354101505,0,0,1.01455188481352,0.6196469961995,0,0,0,1.07001315444375,0,0,0,2.27683904259429,1.39973888097993,0,0,0,0,0,0,0,0.689170200620878,2.02979043692868,0,1.70894156152249,0.952927101831156,0.411362273086194,0,1.62009431171434,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0.280797178113459,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.667852230137435,0.16480387422676,0,0,0,0,0.818149460017238,0,0.311039587661807,0.359473404589307,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,1.01701460117107,0,0,0,0.173624994933292,0,0,0,0,0,0,0.435753854075961,0,0,0,0.23056390438806,0,0,0,0.183195186803725,0,0,0,0,0,0,0.167821586975843,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,4.37004683161367,0,0,0,0.063186579628488,0,0,5.31723098165748,6.95083107338548,6.90652420495896,5.97362148864794,1.42304773014896,0.138674673013139,0.520679215005393,0,0.0870592065804026,0,0,0.0967563312890851,0.219267951258557,0.0821154570532092,0,0,0,1.37041924646751,3.37814839895082,0,0,0.240476460754601,0,0,0,0,0,0.14405479798815,13.6677789121976,0,1.08723364858891,0.523014231561666,2.54995544090804,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0.950403028674658,1.6135860539956,0,0,0,0,0,0.864221491201268,0.653174720218818,0,0.164185041498678,0,2.37955392192264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12482367165896,0,0,0.235265819698172,0.468334905806882,0,1.04478362020812,0.467426619694449,1.66441758450784,0.568209015825267,0,0,0.228840068396924,0.302461847526478,2.02068360757615,1.03498604992744,1.43367090447332,0,1.39736661188633,1.65882483136342,0.53168342911599,0,0.150257608997218,0,0,2.72772988803839,0.214821114084977,0.464033759878494,0.796191777397232,0,0,0,1.26184898228651,0,0,0,0.226705925512272,0.231522474323834,0.244736704506468,0.358177682162975,1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| ||
|short_description=p8@IGF2BP3 | |short_description=p8@IGF2BP3 | ||
}} | }} |
Latest revision as of 20:39, 17 September 2015
Short description: | p8@IGF2BP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_IGF2BP3_5end |
Coexpression cluster: | C4676_giant_Lens_embryonic_Preadipocyte_Iris_Fibroblast_blood |
Association with transcript: | -2bp_to_uc003swf.2_5end |
EntrezGene: | IGF2BP3 |
HGNC: | 28868 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vein endothelial cell | 7.10e-13 | 6 |
endothelial cell | 7.89e-13 | 36 |
endothelial cell of vascular tree | 2.39e-12 | 24 |
mesodermal cell | 2.51e-12 | 121 |
blood vessel endothelial cell | 3.61e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.61e-12 | 18 |
vascular associated smooth muscle cell | 8.51e-11 | 32 |
meso-epithelial cell | 2.19e-09 | 45 |
lining cell | 2.36e-09 | 58 |
barrier cell | 2.36e-09 | 58 |
embryonic cell | 1.60e-08 | 250 |
endothelial cell of umbilical vein | 1.86e-07 | 3 |
visceral preadipocyte | 3.05e-07 | 3 |
smooth muscle cell | 3.95e-07 | 43 |
smooth muscle myoblast | 3.95e-07 | 43 |
aortic smooth muscle cell | 4.48e-07 | 10 |
ciliated cell | 8.69e-07 | 3 |
ciliated epithelial cell | 8.69e-07 | 3 |
multi-ciliated epithelial cell | 8.69e-07 | 3 |
non-pigmented ciliary epithelial cell | 8.69e-07 | 3 |