FFCP PHASE1:Hg19::chr15:47631257..47631269,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80031 | |EntrezGene=80031 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16770 | |HGNC=16770 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000560636_5end | |association_with_transcript=0bp_to_ENST00000560636_5end | ||
|cluster_id=chr15:47631257..47631269,+ | |||
|coexpression_cluster_id=C84 | |coexpression_cluster_id=C84 | ||
|description=CAGE_peak_12_at_SEMA6D_5end | |description=CAGE_peak_12_at_SEMA6D_5end | ||
|id=chr15:47631257..47631269,+ | |id=chr15:47631257..47631269,+ | ||
|ontology_enrichment_celltype=CL:0002541!8.41e-38!3;CL:0000039!6.07e-17!7;CL:0000586!6.07e-17!7;CL:0002537!7.51e-11!5;CL:0002536!2.25e-07!2 | |ontology_enrichment_celltype=CL:0002541!8.41e-38!3;CL:0000039!6.07e-17!7;CL:0000586!6.07e-17!7;CL:0002537!7.51e-11!5;CL:0002536!2.25e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002541;4.84e-30;3!CL:0000039;5.13e-29;7!CL:0000586;5.13e-29;7!CL:0000083;6.87e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,5.61e-30,3;CL:0000039,5.13e-29,7;CL:0000586,5.13e-29,7;CL:0000083,6.87e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0003124;2.10e-23;1 | |||
|ontology_enrichment_disease=DOID:1799!3.50e-14!1;DOID:10165!3.50e-14!1;DOID:1798!3.50e-14!1 | |ontology_enrichment_disease=DOID:1799!3.50e-14!1;DOID:10165!3.50e-14!1;DOID:1798!3.50e-14!1 | ||
|ontology_enrichment_disease_v019=DOID:1799;1.34e-23;1!DOID:10165;1.34e-23;1!DOID:1798;1.34e-23;1!DOID:3095;9.98e-10;22!DOID:2994;9.98e-10;22!DOID:1793;6.87e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,1.34e-23,1;DOID:10165,1.34e-23,1;DOID:1798,1.34e-23,1;DOID:3095,9.98e-10,22;DOID:2994,9.98e-10,22;DOID:1793,6.87e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0005631!2.15e-55!14;UBERON:0000158!2.15e-55!14;UBERON:0003124!3.61e-44!7;UBERON:0000476!8.41e-38!3;UBERON:0000920!8.41e-38!3;UBERON:0000478!4.51e-32!24;UBERON:0004923!1.57e-16!57;UBERON:0000305!2.19e-16!7;UBERON:0004871!2.03e-14!8;UBERON:0001987!2.08e-13!4;UBERON:0004340!2.08e-13!4 | |ontology_enrichment_uberon=UBERON:0005631!2.15e-55!14;UBERON:0000158!2.15e-55!14;UBERON:0003124!3.61e-44!7;UBERON:0000476!8.41e-38!3;UBERON:0000920!8.41e-38!3;UBERON:0000478!4.51e-32!24;UBERON:0004923!1.57e-16!57;UBERON:0000305!2.19e-16!7;UBERON:0004871!2.03e-14!8;UBERON:0001987!2.08e-13!4;UBERON:0004340!2.08e-13!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;4.84e-30;3!UBERON:0000920;4.84e-30;3!UBERON:0005631;9.65e-10;10!UBERON:0000158;9.65e-10;10!UBERON:0000478;6.57e-09;24!UBERON:0001987;7.70e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,5.61e-30,3;UBERON:0003124,9.08e-29,7;UBERON:0005631,8.86e-15,14;UBERON:0000158,8.86e-15,14;UBERON:0000478,6.75e-09,24;UBERON:0001987,7.70e-07,4;UBERON:0004340,7.70e-07,4 | |||
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|short_description=p12@SEMA6D | |short_description=p12@SEMA6D | ||
}} | }} |
Latest revision as of 21:18, 17 September 2015
Short description: | p12@SEMA6D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_SEMA6D_5end |
Coexpression cluster: | C84_choriocarcinoma_pancreatic_Wilms_Mallassezderived_thymus_salivary_colon |
Association with transcript: | 0bp_to_ENST00000560636_5end |
EntrezGene: | SEMA6D |
HGNC: | 16770 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 5.61e-30 | 3 |
germ line cell | 5.13e-29 | 7 |
germ cell | 5.13e-29 | 7 |
epithelial cell of pancreas | 6.87e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 5.61e-30 | 3 |
chorion | 9.08e-29 | 7 |
extraembryonic membrane | 8.86e-15 | 14 |
membranous layer | 8.86e-15 | 14 |
extraembryonic structure | 6.75e-09 | 24 |
placenta | 7.70e-07 | 4 |
allantois | 7.70e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 1.34e-23 | 1 |
endocrine pancreas cancer | 1.34e-23 | 1 |
pancreatic endocrine carcinoma | 1.34e-23 | 1 |
germ cell and embryonal cancer | 9.98e-10 | 22 |
germ cell cancer | 9.98e-10 | 22 |
pancreatic cancer | 6.87e-07 | 4 |