FFCP PHASE1:Hg19::chr10:30025857..30025872,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6840 | |EntrezGene=6840 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11480 | |HGNC=11480 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc009xld.1_5end | |association_with_transcript=0bp_to_uc009xld.1_5end | ||
|cluster_id=chr10:30025857..30025872,- | |||
|coexpression_cluster_id=C48 | |||
|description=CAGE_peak_2_at_SVIL_5end | |description=CAGE_peak_2_at_SVIL_5end | ||
|id=chr10:30025857..30025872,- | |id=chr10:30025857..30025872,- | ||
|ontology_enrichment_celltype=CL:0002139!9.94e-10!24;CL:0000115!5.45e-09!35;CL:0002078!2.60e-08!44;CL:0000071!9.74e-08!18;CL:0002546!9.74e-08!18 | |ontology_enrichment_celltype=CL:0002139!9.94e-10!24;CL:0000115!5.45e-09!35;CL:0002078!2.60e-08!44;CL:0000071!9.74e-08!18;CL:0002546!9.74e-08!18 | ||
|ontology_enrichment_celltype_v019=CL:0002139;4.70e-10;24!CL:0000115;1.79e-08;36!CL:0000071;5.64e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,4.06e-10,36;CL:0002139,4.07e-10,24;CL:0002078,2.03e-09,45;CL:0000071,4.95e-08,18;CL:0002546,4.95e-08,18 | |||
|ontology_enrichment_development_v019=CL:0002546;5.64e-08;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!2.23e-32!659;UBERON:0000467!1.91e-29!625;UBERON:0000480!5.31e-29!626;UBERON:0000922!1.10e-26!612;UBERON:0002050!1.26e-26!605;UBERON:0005423!1.26e-26!605;UBERON:0000923!4.73e-26!604;UBERON:0005291!4.73e-26!604;UBERON:0006598!4.73e-26!604;UBERON:0002532!4.73e-26!604;UBERON:0000477!3.09e-23!286;UBERON:0004111!7.16e-20!241;UBERON:0000926!8.46e-18!448;UBERON:0004120!8.46e-18!448;UBERON:0006603!8.46e-18!448;UBERON:0003914!8.54e-17!118;UBERON:0002049!9.85e-17!79;UBERON:0007798!9.85e-17!79;UBERON:0000481!2.89e-16!347;UBERON:0001009!6.02e-15!113;UBERON:0000062!1.34e-14!511;UBERON:0004535!6.54e-14!110;UBERON:0000025!8.12e-14!194;UBERON:0000119!9.11e-14!312;UBERON:0001981!1.37e-13!60;UBERON:0007500!1.37e-13!60;UBERON:0004537!1.37e-13!60;UBERON:0006965!1.37e-13!60;UBERON:0000055!2.64e-13!69;UBERON:0000483!2.64e-13!309;UBERON:0004872!2.10e-11!84;UBERON:0007023!2.42e-10!115;UBERON:0000475!1.69e-09!365;UBERON:0001637!2.28e-09!42;UBERON:0003509!2.28e-09!42;UBERON:0004572!2.28e-09!42;UBERON:0005256!4.24e-09!143;UBERON:0003104!1.87e-08!238;UBERON:0009142!1.87e-08!238;UBERON:0004573!2.51e-08!33;UBERON:0004571!2.51e-08!33;UBERON:0002100!8.94e-08!216;UBERON:0003103!9.04e-08!69;UBERON:0001986!9.74e-08!18;UBERON:0004638!9.74e-08!18;UBERON:0004852!9.74e-08!18;UBERON:0000479!1.37e-07!787;UBERON:0003081!1.81e-07!216;UBERON:0000490!3.01e-07!138 | |ontology_enrichment_uberon=UBERON:0000468!2.23e-32!659;UBERON:0000467!1.91e-29!625;UBERON:0000480!5.31e-29!626;UBERON:0000922!1.10e-26!612;UBERON:0002050!1.26e-26!605;UBERON:0005423!1.26e-26!605;UBERON:0000923!4.73e-26!604;UBERON:0005291!4.73e-26!604;UBERON:0006598!4.73e-26!604;UBERON:0002532!4.73e-26!604;UBERON:0000477!3.09e-23!286;UBERON:0004111!7.16e-20!241;UBERON:0000926!8.46e-18!448;UBERON:0004120!8.46e-18!448;UBERON:0006603!8.46e-18!448;UBERON:0003914!8.54e-17!118;UBERON:0002049!9.85e-17!79;UBERON:0007798!9.85e-17!79;UBERON:0000481!2.89e-16!347;UBERON:0001009!6.02e-15!113;UBERON:0000062!1.34e-14!511;UBERON:0004535!6.54e-14!110;UBERON:0000025!8.12e-14!194;UBERON:0000119!9.11e-14!312;UBERON:0001981!1.37e-13!60;UBERON:0007500!1.37e-13!60;UBERON:0004537!1.37e-13!60;UBERON:0006965!1.37e-13!60;UBERON:0000055!2.64e-13!69;UBERON:0000483!2.64e-13!309;UBERON:0004872!2.10e-11!84;UBERON:0007023!2.42e-10!115;UBERON:0000475!1.69e-09!365;UBERON:0001637!2.28e-09!42;UBERON:0003509!2.28e-09!42;UBERON:0004572!2.28e-09!42;UBERON:0005256!4.24e-09!143;UBERON:0003104!1.87e-08!238;UBERON:0009142!1.87e-08!238;UBERON:0004573!2.51e-08!33;UBERON:0004571!2.51e-08!33;UBERON:0002100!8.94e-08!216;UBERON:0003103!9.04e-08!69;UBERON:0001986!9.74e-08!18;UBERON:0004638!9.74e-08!18;UBERON:0004852!9.74e-08!18;UBERON:0000479!1.37e-07!787;UBERON:0003081!1.81e-07!216;UBERON:0000490!3.01e-07!138 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;5.56e-08;33!UBERON:0004571;5.56e-08;33!UBERON:0004638;5.64e-08;18!UBERON:0001986;5.64e-08;18!UBERON:0004852;5.64e-08;18!UBERON:0001637;1.32e-07;42!UBERON:0003509;1.32e-07;42!UBERON:0004572;1.32e-07;42!UBERON:0000055;2.17e-07;65!UBERON:0002049;3.69e-07;75!UBERON:0007798;3.69e-07;75!UBERON:0007500;8.74e-07;56!UBERON:0001981;8.74e-07;56!UBERON:0004537;8.74e-07;56 | |||
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|short_description=p2@SVIL | |short_description=p2@SVIL | ||
}} | }} |
Latest revision as of 21:27, 17 September 2015
Short description: | p2@SVIL |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SVIL_5end |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | 0bp_to_uc009xld.1_5end |
EntrezGene: | SVIL |
HGNC: | 11480 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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endothelial cell | 4.06e-10 | 36 |
endothelial cell of vascular tree | 4.07e-10 | 24 |
meso-epithelial cell | 2.03e-09 | 45 |
blood vessel endothelial cell | 4.95e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.95e-08 | 18 |