FFCP PHASE1:Hg19::chr1:158815389..158815400,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:158815389..158815400,+ to FFCP PHASE1:Hg19::chr1:158815389..158815400,+: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4332 | |EntrezGene=4332 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7183 | |HGNC=7183 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-290bp_to_ENST00000438394_5end | |||
|cluster_id=chr1:158815389..158815400,+ | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_11_at_MNDA_5end | |||
|id=chr1:158815389..158815400,+ | |||
|ontology_enrichment_celltype=CL:0000766!3.12e-55!76;CL:0002194!4.99e-55!63;CL:0000576!4.99e-55!63;CL:0000040!4.99e-55!63;CL:0000559!4.99e-55!63;CL:0002009!5.21e-53!65;CL:0002057!8.28e-49!42;CL:0000839!1.84e-48!70;CL:0000557!1.26e-47!71;CL:0000763!1.06e-45!112;CL:0000049!1.06e-45!112;CL:0000860!5.90e-45!45;CL:0000037!8.28e-35!172;CL:0000566!8.28e-35!172;CL:0000988!1.75e-33!182;CL:0002087!1.98e-33!119;CL:0000738!2.28e-33!140;CL:0002032!2.70e-32!165;CL:0000837!2.70e-32!165;CL:0002031!2.18e-28!124;CL:0002393!4.51e-13!9;CL:0002397!4.51e-13!9;CL:0000775!1.59e-09!3;CL:0000134!2.21e-09!358;CL:0002320!6.01e-09!365;CL:0000219!1.97e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000775;2.85e-27;3!CL:0000473;1.20e-19;39!CL:0000234;1.20e-19;39!CL:0000094;4.42e-18;8!CL:0000860;1.96e-17;33!CL:0002057;1.96e-17;33!CL:0000081;3.28e-13;11!CL:0000766;5.02e-11;69!CL:0000576;8.00e-11;48!CL:0000763;5.34e-10;100!CL:0000235;9.28e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,2.98e-27,3;CL:0000766,3.10e-24,72;CL:0000763,3.35e-20,108;CL:0000049,3.35e-20,108;CL:0000473,5.60e-20,48;CL:0000234,5.60e-20,48;CL:0000094,4.43e-18,8;CL:0002194,1.23e-15,59;CL:0000576,1.23e-15,59;CL:0000040,1.23e-15,59;CL:0000559,1.23e-15,59;CL:0000860,2.42e-15,42;CL:0002057,2.42e-15,42;CL:0002009,4.47e-15,61;CL:0000839,8.05e-14,66;CL:0000557,1.36e-13,67;CL:0000081,3.28e-13,11;CL:0002032,1.20e-12,161;CL:0000837,1.20e-12,161;CL:0000037,5.28e-12,168;CL:0000738,1.02e-11,136;CL:0000988,3.01e-11,177;CL:0002087,3.06e-07,115;CL:0002031,7.19e-07,120;CL:0000235,9.69e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;2.11e-12;42!CL:0000049;2.86e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.06e-58!102;UBERON:0003061!2.06e-58!102;UBERON:0002193!2.73e-54!112;UBERON:0002371!2.33e-43!80;UBERON:0001474!1.46e-39!86;UBERON:0004765!4.86e-32!101;UBERON:0001434!4.86e-32!101;UBERON:0002405!5.64e-30!115;UBERON:0003081!1.82e-22!216;UBERON:0000178!1.91e-19!15;UBERON:0000179!1.91e-19!15;UBERON:0000463!1.91e-19!15;UBERON:0002204!4.35e-15!167;UBERON:0002384!6.61e-09!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.87e-20;15!UBERON:0000179;1.87e-20;15!UBERON:0000463;1.87e-20;15!UBERON:0002390;2.43e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.31e-22,98;UBERON:0003061,2.31e-22,98;UBERON:0000178,2.11e-20,15;UBERON:0000179,2.11e-20,15;UBERON:0000463,2.11e-20,15;UBERON:0002193,4.73e-20,108;UBERON:0002371,8.48e-12,76;UBERON:0001474,8.09e-11,82;UBERON:0004765,1.03e-09,90;UBERON:0003081,2.31e-09,203;UBERON:0002405,2.40e-09,93;UBERON:0001434,1.41e-08,100 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.328402357799783,0.0787107813136792,0,0,0,0,0,0,0,0,0.293600439334847,0,0.401088894940283,0.651032612147555,0.447830948479849,0,0,1.30858414901608,0,0,0,0,0.619412741790207,1.7261543539329,0.512321413058201,0,1.37898272294647,0.645484683583826,0,1.69418105588344,0.272906150057846,0,0.306083892370903,0.320929027076094,0,0.989553900560148,0.797854630486527,1.70489900213078,1.7412554317715,0.56738522469114,0,3.76872997885115,4.17186334736161,0.217188844705117,3.02699751316684,0.368277635987565,0,0.845021145247767,0.637812899895131,0.628975936525128,0.898629049171961,0.901061357049038,0.964353520182481,0,0.39783335439818,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.930705723632056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.75560528296651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.234004265139238,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50677127429638,12.6500363689819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.7291475028908,26.9245313283622,1.65766205374414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,2.84823593587081,1.66762242820452,1.23408681925858,2.59389324477087,0.540031437238115,3.17250070517708,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,2.6635582281414,0,0,0,0.201799707191048,0.425846237690326,0.687010689511529,0.307240764308458,0.447352215784832,0.166849141711909,2.34465714482448,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.18449277040819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0.227662191351298,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.328402357799783,0.0787107813136792,0,0,0,0,0,0,0,0,0.293600439334847,0,0.401088894940283,0.651032612147555,0.447830948479849,0,0,1.30858414901608,0,0,0,0,0.619412741790207,1.7261543539329,0.512321413058201,0,1.37898272294647,0.645484683583826,0,1.69418105588344,0.272906150057846,0,0.306083892370903,0.320929027076094,0,0.989553900560148,0.797854630486527,1.70489900213078,1.7412554317715,0.56738522469114,0,3.76872997885115,4.17186334736161,0.217188844705117,3.02699751316684,0.368277635987565,0,0.845021145247767,0.637812899895131,0.628975936525128,0.898629049171961,0.901061357049038,0.964353520182481,0,0.39783335439818,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.930705723632056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.75560528296651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.234004265139238,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50677127429638,12.6500363689819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.7291475028908,26.9245313283622,1.65766205374414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,2.84823593587081,1.66762242820452,1.23408681925858,2.59389324477087,0.540031437238115,3.17250070517708,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,2.6635582281414,0,0,0,0.201799707191048,0.425846237690326,0.687010689511529,0.307240764308458,0.447352215784832,0.166849141711909,2.34465714482448,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.18449277040819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0.227662191351298,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | ||
|short_description=p11@MNDA | |||
}} | }} |
Latest revision as of 21:45, 17 September 2015
Short description: | p11@MNDA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_MNDA_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | -290bp_to_ENST00000438394_5end |
EntrezGene: | MNDA |
HGNC: | 7183 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 2.98e-27 | 3 |
myeloid leukocyte | 3.10e-24 | 72 |
myeloid cell | 3.35e-20 | 108 |
common myeloid progenitor | 3.35e-20 | 108 |
defensive cell | 5.60e-20 | 48 |
phagocyte | 5.60e-20 | 48 |
granulocyte | 4.43e-18 | 8 |
monopoietic cell | 1.23e-15 | 59 |
monocyte | 1.23e-15 | 59 |
monoblast | 1.23e-15 | 59 |
promonocyte | 1.23e-15 | 59 |
classical monocyte | 2.42e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.42e-15 | 42 |
macrophage dendritic cell progenitor | 4.47e-15 | 61 |
myeloid lineage restricted progenitor cell | 8.05e-14 | 66 |
granulocyte monocyte progenitor cell | 1.36e-13 | 67 |
blood cell | 3.28e-13 | 11 |
hematopoietic oligopotent progenitor cell | 1.20e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.20e-12 | 161 |
hematopoietic stem cell | 5.28e-12 | 168 |
leukocyte | 1.02e-11 | 136 |
hematopoietic cell | 3.01e-11 | 177 |
nongranular leukocyte | 3.06e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 7.19e-07 | 120 |
macrophage | 9.69e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.31e-22 | 98 |
blood island | 2.31e-22 | 98 |
blood | 2.11e-20 | 15 |
haemolymphatic fluid | 2.11e-20 | 15 |
organism substance | 2.11e-20 | 15 |
hemolymphoid system | 4.73e-20 | 108 |
bone marrow | 8.48e-12 | 76 |
bone element | 8.09e-11 | 82 |
skeletal element | 1.03e-09 | 90 |
lateral plate mesoderm | 2.31e-09 | 203 |
immune system | 2.40e-09 | 93 |
skeletal system | 1.41e-08 | 100 |