FFCP PHASE1:Hg19::chr1:158978805..158978820,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3428 | |EntrezGene=3428 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5395 | |HGNC=5395 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-80bp_to_ENST00000447473_5end | |association_with_transcript=-80bp_to_ENST00000447473_5end | ||
|cluster_id=chr1:158978805..158978820,+ | |||
|coexpression_cluster_id=C3885 | |||
|description=CAGE_peak_23_at_IFI16_5end | |description=CAGE_peak_23_at_IFI16_5end | ||
|id=chr1:158978805..158978820,+ | |id=chr1:158978805..158978820,+ | ||
|ontology_enrichment_celltype=CL:0000542!1.44e-26!53;CL:0000051!1.44e-26!53;CL:0000838!2.83e-25!52;CL:0000988!1.84e-21!182;CL:0000037!3.93e-20!172;CL:0000566!3.93e-20!172;CL:0002032!1.54e-18!165;CL:0000837!1.54e-18!165;CL:0002031!1.71e-17!124;CL:0000738!4.31e-17!140;CL:0002087!1.16e-16!119;CL:0000084!9.15e-14!25;CL:0000827!9.15e-14!25;CL:0000945!3.14e-09!24;CL:0000826!3.14e-09!24;CL:0000791!3.17e-07!18;CL:0000789!3.17e-07!18;CL:0002420!3.17e-07!18;CL:0002419!3.17e-07!18;CL:0000790!3.17e-07!18;CL:0000817!7.76e-07!3 | |ontology_enrichment_celltype=CL:0000542!1.44e-26!53;CL:0000051!1.44e-26!53;CL:0000838!2.83e-25!52;CL:0000988!1.84e-21!182;CL:0000037!3.93e-20!172;CL:0000566!3.93e-20!172;CL:0002032!1.54e-18!165;CL:0000837!1.54e-18!165;CL:0002031!1.71e-17!124;CL:0000738!4.31e-17!140;CL:0002087!1.16e-16!119;CL:0000084!9.15e-14!25;CL:0000827!9.15e-14!25;CL:0000945!3.14e-09!24;CL:0000826!3.14e-09!24;CL:0000791!3.17e-07!18;CL:0000789!3.17e-07!18;CL:0002420!3.17e-07!18;CL:0002419!3.17e-07!18;CL:0000790!3.17e-07!18;CL:0000817!7.76e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002127;3.08e-14;1!CL:0000911;3.08e-14;1!CL:0000814;3.08e-14;1!CL:0000785;1.42e-13;1!CL:0000819;1.42e-13;1!CL:0000945;6.27e-13;24!CL:0000542;4.19e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,3.08e-14,1;CL:0000914,3.08e-14,1;CL:0000911,3.08e-14,1;CL:0000814,3.08e-14,1;CL:0002042,3.08e-14,1;CL:0002039,3.08e-14,1;CL:0002040,3.08e-14,1;CL:0002041,3.08e-14,1;CL:0000819,1.25e-13,1;CL:0000945,5.97e-13,24;CL:0000826,5.97e-13,24;CL:0000838,3.24e-11,52;CL:0000542,5.42e-11,53;CL:0000051,5.42e-11,53;CL:0000988,1.32e-08,177;CL:0000893,9.25e-08,2;CL:0002489,9.25e-08,2;CL:0000809,9.25e-08,2;CL:0000808,9.25e-08,2;CL:0000894,9.25e-08,2;CL:0000806,9.25e-08,2;CL:0000807,9.25e-08,2;CL:0000805,9.25e-08,2;CL:0002425,9.25e-08,2;CL:0000785,1.87e-07,2;CL:0000955,1.87e-07,2;CL:0000818,1.87e-07,2;CL:0000954,1.87e-07,2;CL:0000816,1.87e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000051;4.19e-08;53!CL:0002425;9.25e-08;2!CL:0000954;1.99e-07;2 | |||
|ontology_enrichment_disease=DOID:2531!1.80e-10!51;DOID:0060083!1.80e-10!51;DOID:0060058!1.90e-08!10;DOID:1240!5.42e-07!39 | |ontology_enrichment_disease=DOID:2531!1.80e-10!51;DOID:0060083!1.80e-10!51;DOID:0060058!1.90e-08!10;DOID:1240!5.42e-07!39 | ||
|ontology_enrichment_disease_v019=DOID:0060073;1.42e-13;1!DOID:8675;1.42e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,1.25e-13,1;DOID:8675,1.25e-13,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;5.19e-12;10!UBERON:0000178;3.47e-08;15!UBERON:0000179;3.47e-08;15!UBERON:0000463;3.47e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,5.39e-12,10;UBERON:0000358,5.39e-12,10;UBERON:0000307,5.39e-12,10;UBERON:0000091,5.39e-12,10;UBERON:0000087,5.39e-12,10;UBERON:0007010,5.39e-12,10;UBERON:0007806,5.39e-12,10;UBERON:0008780,5.39e-12,10;UBERON:0005728,5.39e-12,10;UBERON:0000178,3.56e-08,15;UBERON:0000179,3.56e-08,15;UBERON:0000463,3.56e-08,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29240217243854,2.70931945184821,2.59745578335141,0,0.383829398097213,0,0,0,0,1.00707360754392,0.284338464974843,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0.512321413058201,0.709446689665756,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0.426224750532694,0,0,0,1.25624332628372,0,0.868755378820466,0.605399502633369,0,0,0,0,0,0,0,0,0,0.59675003159727,0.730656615058536,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0.83593247695339,0.32592226663359,0,0,1.00269411196656,0.294605907474837,0.443067789167242,1.62482318259009,0.640456598628376,0.520237390239513,0.657751618414705,0.276350017785848,0.579606171470105,0,0,0,1.35971211237079,0,0.68725489096526,1.26509846009751,0,0.651083453856419,0.950452044448374,0.752875595388864,0.639933055772092,0,0.236777252044017,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.352193736052904,0,0,0.25248486685276,0.126995788584338,0,0,0,0.102827492703324,0,0.857479297891735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.59549090373462,0.394061520403854,0.215627574859517,0.641715181398742,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0.413536052245775,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0.952927101831156,0,0,0,0.79312517629427,0,0,0,0.371606350251437,0.28853842595289,0.284567373393656,0,0,0.191505370132367,0.635020748171649,0,0,0,0,2.50634477090067,0,0.1605880751037,0,0,0,0,0,0,0.19538809540204,0.278406173895242,0,0,0.33307196799782,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0.329607748453519,0,0,0.276283915531148,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04386596391473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37216902944498,2.34771483998355,3.65476823269094,0,0,0,1.27718352450966,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0.340776043570843,0.113312091520126,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0.303298235083296,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0.59996218756479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23658523500376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0.806637912890455,0.685952037749674,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354996002191696,0.340853619036631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.657887425858975,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.193766729508018,0.124149428591716,0,0,0,0,0,0.202056159043763,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0.320568492303233 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| ||
|short_description=p23@IFI16 | |short_description=p23@IFI16 | ||
}} | }} |
Latest revision as of 21:54, 17 September 2015
Short description: | p23@IFI16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_IFI16_5end |
Coexpression cluster: | C3885_B_chronic_NK_cord_plasma_CD4_acute |
Association with transcript: | -80bp_to_ENST00000447473_5end |
EntrezGene: | IFI16 |
HGNC: | 5395 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 3.08e-14 | 1 |
immature NK T cell | 3.08e-14 | 1 |
effector T cell | 3.08e-14 | 1 |
mature NK T cell | 3.08e-14 | 1 |
immature NK T cell stage IV | 3.08e-14 | 1 |
immature NK T cell stage I | 3.08e-14 | 1 |
immature NK T cell stage II | 3.08e-14 | 1 |
immature NK T cell stage III | 3.08e-14 | 1 |
B-1 B cell | 1.25e-13 | 1 |
lymphocyte of B lineage | 5.97e-13 | 24 |
pro-B cell | 5.97e-13 | 24 |
lymphoid lineage restricted progenitor cell | 3.24e-11 | 52 |
lymphocyte | 5.42e-11 | 53 |
common lymphoid progenitor | 5.42e-11 | 53 |
hematopoietic cell | 1.32e-08 | 177 |
thymocyte | 9.25e-08 | 2 |
double negative thymocyte | 9.25e-08 | 2 |
double-positive, alpha-beta thymocyte | 9.25e-08 | 2 |
DN4 thymocyte | 9.25e-08 | 2 |
DN1 thymic pro-T cell | 9.25e-08 | 2 |
DN2 thymocyte | 9.25e-08 | 2 |
DN3 thymocyte | 9.25e-08 | 2 |
immature single positive thymocyte | 9.25e-08 | 2 |
early T lineage precursor | 9.25e-08 | 2 |
mature B cell | 1.87e-07 | 2 |
pre-B-II cell | 1.87e-07 | 2 |
transitional stage B cell | 1.87e-07 | 2 |
small pre-B-II cell | 1.87e-07 | 2 |
immature B cell | 1.87e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 5.39e-12 | 10 |
blastocyst | 5.39e-12 | 10 |
blastula | 5.39e-12 | 10 |
bilaminar disc | 5.39e-12 | 10 |
inner cell mass | 5.39e-12 | 10 |
cleaving embryo | 5.39e-12 | 10 |
connecting stalk | 5.39e-12 | 10 |
inner cell mass derived epiblast | 5.39e-12 | 10 |
extraembryonic mesoderm | 5.39e-12 | 10 |
blood | 3.56e-08 | 15 |
haemolymphatic fluid | 3.56e-08 | 15 |
organism substance | 3.56e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 1.25e-13 | 1 |
lymphosarcoma | 1.25e-13 | 1 |