FFCP PHASE1:Hg19::chr12:25054986..25054996,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=586 | |EntrezGene=586 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=976 | |HGNC=976 | ||
|TSSclassifier=strong | |||
|UniProt=Q68DQ7 | |UniProt=Q68DQ7 | ||
|association_with_transcript=233bp_to_ENST00000538118_5end | |association_with_transcript=233bp_to_ENST00000538118_5end | ||
|cluster_id=chr12:25054986..25054996,- | |||
|coexpression_cluster_id=C128 | |coexpression_cluster_id=C128 | ||
|description=CAGE_peak_30_at_BCAT1_5end | |description=CAGE_peak_30_at_BCAT1_5end | ||
|id=chr12:25054986..25054996,- | |id=chr12:25054986..25054996,- | ||
|ontology_enrichment_celltype=CL:0002139!5.63e-25!24;CL:0000071!1.82e-17!18;CL:0002546!1.82e-17!18;CL:0000115!1.90e-17!35;CL:0002078!9.76e-13!44;CL:1000413!5.00e-11!9;CL:0002322!1.06e-09!5;CL:0005020!3.19e-09!6;CL:0002138!3.19e-09!6;CL:0005022!3.19e-09!6;CL:0000213!1.21e-08!57;CL:0000215!1.21e-08!57;CL:0002618!2.53e-07!3 | |ontology_enrichment_celltype=CL:0002139!5.63e-25!24;CL:0000071!1.82e-17!18;CL:0002546!1.82e-17!18;CL:0000115!1.90e-17!35;CL:0002078!9.76e-13!44;CL:1000413!5.00e-11!9;CL:0002322!1.06e-09!5;CL:0005020!3.19e-09!6;CL:0002138!3.19e-09!6;CL:0005022!3.19e-09!6;CL:0000213!1.21e-08!57;CL:0000215!1.21e-08!57;CL:0002618!2.53e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000039;5.23e-24;7!CL:0000586;5.23e-24;7!CL:0002139;2.37e-12;24!CL:0000047;2.72e-10;2!CL:0002545;2.72e-10;2!CL:0000071;1.36e-09;18!CL:0000115;2.66e-07;36!CL:0002144;2.79e-07;3!CL:0002618;2.79e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,3.83e-24,7;CL:0000586,3.83e-24,7;CL:0002139,2.52e-12,24;CL:0002545,2.99e-10,2;CL:0000071,1.44e-09,18;CL:0002546,1.44e-09,18;CL:0000115,2.54e-08,36;CL:0002144,2.47e-07,3;CL:0002618,3.35e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.98e-17;10!UBERON:0005564;4.98e-17;10!CL:0002546;1.36e-09;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3095;4.44e-08;22!DOID:2994;4.44e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,4.03e-08,22;DOID:2994,4.03e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0001049!5.75e-21!57;UBERON:0005068!5.75e-21!57;UBERON:0006241!5.75e-21!57;UBERON:0007135!5.75e-21!57;UBERON:0003075!1.75e-19!86;UBERON:0007284!1.75e-19!86;UBERON:0003056!5.09e-19!61;UBERON:0000073!7.39e-19!94;UBERON:0001016!7.39e-19!94;UBERON:0002616!2.07e-18!59;UBERON:0002346!3.59e-18!90;UBERON:0005743!3.94e-18!86;UBERON:0001986!1.82e-17!18;UBERON:0004638!1.82e-17!18;UBERON:0004852!1.82e-17!18;UBERON:0002780!2.31e-17!41;UBERON:0001890!2.31e-17!41;UBERON:0006240!2.31e-17!41;UBERON:0000955!5.45e-17!69;UBERON:0006238!5.45e-17!69;UBERON:0003080!8.23e-17!42;UBERON:0001017!1.06e-16!82;UBERON:0002020!6.36e-16!34;UBERON:0003528!6.36e-16!34;UBERON:0001893!9.18e-16!34;UBERON:0001869!3.08e-15!32;UBERON:0002791!1.23e-14!33;UBERON:0000487!1.23e-13!22;UBERON:0006914!1.40e-11!25;UBERON:0000033!1.88e-11!123;UBERON:0003915!5.00e-11!9;UBERON:0004700!5.00e-11!9;UBERON:0001917!5.00e-11!9;UBERON:0000956!9.48e-11!25;UBERON:0000203!9.48e-11!25;UBERON:0000025!9.82e-11!194;UBERON:0000153!1.72e-10!129;UBERON:0007811!1.72e-10!129;UBERON:0004121!4.35e-10!169;UBERON:0000924!1.30e-09!173;UBERON:0006601!1.30e-09!173;UBERON:0004111!2.43e-09!241;UBERON:0002298!2.08e-08!8;UBERON:0001950!2.99e-08!20;UBERON:0000483!5.41e-08!309;UBERON:0007023!6.40e-08!115;UBERON:0000119!8.79e-08!312;UBERON:0000468!1.21e-07!659;UBERON:0002619!2.46e-07!22;UBERON:0000477!2.62e-07!286;UBERON:0000200!2.84e-07!6;UBERON:0002049!5.13e-07!79;UBERON:0007798!5.13e-07!79;UBERON:0002308!7.40e-07!9;UBERON:0000125!7.40e-07!9;UBERON:0001473!9.04e-07!8;UBERON:0004536!9.04e-07!8;UBERON:0006558!9.04e-07!8 | |ontology_enrichment_uberon=UBERON:0001049!5.75e-21!57;UBERON:0005068!5.75e-21!57;UBERON:0006241!5.75e-21!57;UBERON:0007135!5.75e-21!57;UBERON:0003075!1.75e-19!86;UBERON:0007284!1.75e-19!86;UBERON:0003056!5.09e-19!61;UBERON:0000073!7.39e-19!94;UBERON:0001016!7.39e-19!94;UBERON:0002616!2.07e-18!59;UBERON:0002346!3.59e-18!90;UBERON:0005743!3.94e-18!86;UBERON:0001986!1.82e-17!18;UBERON:0004638!1.82e-17!18;UBERON:0004852!1.82e-17!18;UBERON:0002780!2.31e-17!41;UBERON:0001890!2.31e-17!41;UBERON:0006240!2.31e-17!41;UBERON:0000955!5.45e-17!69;UBERON:0006238!5.45e-17!69;UBERON:0003080!8.23e-17!42;UBERON:0001017!1.06e-16!82;UBERON:0002020!6.36e-16!34;UBERON:0003528!6.36e-16!34;UBERON:0001893!9.18e-16!34;UBERON:0001869!3.08e-15!32;UBERON:0002791!1.23e-14!33;UBERON:0000487!1.23e-13!22;UBERON:0006914!1.40e-11!25;UBERON:0000033!1.88e-11!123;UBERON:0003915!5.00e-11!9;UBERON:0004700!5.00e-11!9;UBERON:0001917!5.00e-11!9;UBERON:0000956!9.48e-11!25;UBERON:0000203!9.48e-11!25;UBERON:0000025!9.82e-11!194;UBERON:0000153!1.72e-10!129;UBERON:0007811!1.72e-10!129;UBERON:0004121!4.35e-10!169;UBERON:0000924!1.30e-09!173;UBERON:0006601!1.30e-09!173;UBERON:0004111!2.43e-09!241;UBERON:0002298!2.08e-08!8;UBERON:0001950!2.99e-08!20;UBERON:0000483!5.41e-08!309;UBERON:0007023!6.40e-08!115;UBERON:0000119!8.79e-08!312;UBERON:0000468!1.21e-07!659;UBERON:0002619!2.46e-07!22;UBERON:0000477!2.62e-07!286;UBERON:0000200!2.84e-07!6;UBERON:0002049!5.13e-07!79;UBERON:0007798!5.13e-07!79;UBERON:0002308!7.40e-07!9;UBERON:0000125!7.40e-07!9;UBERON:0001473!9.04e-07!8;UBERON:0004536!9.04e-07!8;UBERON:0006558!9.04e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;4.20e-21;8!UBERON:0003135;1.52e-15;11!UBERON:0005800;2.72e-10;2!UBERON:0001515;2.72e-10;2!UBERON:0004638;1.36e-09;18!UBERON:0001986;1.36e-09;18!UBERON:0004852;1.36e-09;18!UBERON:0000991;1.95e-08;21!UBERON:0003101;4.44e-08;22!UBERON:0000079;4.44e-08;22!UBERON:0000487;5.93e-08;22!UBERON:0010523;2.79e-07;3!UBERON:0001915;2.79e-07;3!UBERON:0001982;2.79e-07;3!UBERON:0006914;4.60e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.20e-21,8;UBERON:0003135,1.25e-15,11;UBERON:0005800,2.99e-10,2;UBERON:0001515,2.99e-10,2;UBERON:0004638,1.44e-09,18;UBERON:0001986,1.44e-09,18;UBERON:0004852,1.44e-09,18;UBERON:0000991,1.76e-08,21;UBERON:0009196,1.76e-08,21;UBERON:0009117,1.76e-08,21;UBERON:0005564,1.76e-08,21;UBERON:0004176,4.03e-08,22;UBERON:0003101,4.03e-08,22;UBERON:0000079,4.03e-08,22;UBERON:0000487,6.23e-08,22;UBERON:0010523,2.47e-07,3;UBERON:0001915,2.47e-07,3;UBERON:0001982,2.47e-07,3;UBERON:0006914,4.79e-07,25 | |||
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| ||
|short_description=p30@BCAT1 | |short_description=p30@BCAT1 | ||
}} | }} |
Latest revision as of 21:54, 17 September 2015
Short description: | p30@BCAT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_30_at_BCAT1_5end |
Coexpression cluster: | C128_testicular_choriocarcinoma_H9_teratocarcinoma_pancreatic_iPS_HES3GFP |
Association with transcript: | 233bp_to_ENST00000538118_5end |
EntrezGene: | BCAT1 |
HGNC: | 976 |
UniProt: | Q68DQ7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 3.83e-24 | 7 |
germ cell | 3.83e-24 | 7 |
endothelial cell of vascular tree | 2.52e-12 | 24 |
thoracic aorta endothelial cell | 2.99e-10 | 2 |
blood vessel endothelial cell | 1.44e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.44e-09 | 18 |
endothelial cell | 2.54e-08 | 36 |
capillary endothelial cell | 2.47e-07 | 3 |
endothelial cell of umbilical vein | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 3.20e-21 | 8 |
male reproductive organ | 1.25e-15 | 11 |
segment of aorta | 2.99e-10 | 2 |
thoracic aorta | 2.99e-10 | 2 |
blood vessel endothelium | 1.44e-09 | 18 |
endothelium | 1.44e-09 | 18 |
cardiovascular system endothelium | 1.44e-09 | 18 |
gonad | 1.76e-08 | 21 |
indifferent external genitalia | 1.76e-08 | 21 |
indifferent gonad | 1.76e-08 | 21 |
gonad primordium | 1.76e-08 | 21 |
external genitalia | 4.03e-08 | 22 |
male organism | 4.03e-08 | 22 |
male reproductive system | 4.03e-08 | 22 |
simple squamous epithelium | 6.23e-08 | 22 |
microcirculatory vessel | 2.47e-07 | 3 |
endothelium of capillary | 2.47e-07 | 3 |
capillary | 2.47e-07 | 3 |
squamous epithelium | 4.79e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 4.03e-08 | 22 |
germ cell cancer | 4.03e-08 | 22 |