FFCP PHASE1:Hg19::chr11:3968595..3968604,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6786 | |EntrezGene=6786 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11386 | |HGNC=11386 | ||
|TSSclassifier=strong | |||
|UniProt=E9PR07 | |UniProt=E9PR07 | ||
|association_with_transcript=22bp_to_ENST00000532990_5end | |association_with_transcript=22bp_to_ENST00000532990_5end | ||
|cluster_id=chr11:3968595..3968604,+ | |||
|coexpression_cluster_id=C28 | |coexpression_cluster_id=C28 | ||
|description=CAGE_peak_11_at_STIM1_5end | |description=CAGE_peak_11_at_STIM1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000625!2.30e-19!11;CL:0000791!9.01e-18!18;CL:0000789!9.01e-18!18;CL:0002420!9.01e-18!18;CL:0002419!9.01e-18!18;CL:0000790!9.01e-18!18;CL:0000084!1.29e-17!25;CL:0000827!1.29e-17!25;CL:0000838!4.04e-15!52;CL:0000542!9.37e-15!53;CL:0000051!9.37e-15!53;CL:0000623!3.30e-11!3;CL:0000825!3.30e-11!3;CL:0000842!5.50e-11!3;CL:0000738!8.10e-10!140;CL:0002087!2.53e-09!119;CL:0000224!2.44e-08!4;CL:0000037!6.79e-07!172;CL:0000566!6.79e-07!172;CL:0002031!7.06e-07!124 | |ontology_enrichment_celltype=CL:0000625!2.30e-19!11;CL:0000791!9.01e-18!18;CL:0000789!9.01e-18!18;CL:0002420!9.01e-18!18;CL:0002419!9.01e-18!18;CL:0000790!9.01e-18!18;CL:0000084!1.29e-17!25;CL:0000827!1.29e-17!25;CL:0000838!4.04e-15!52;CL:0000542!9.37e-15!53;CL:0000051!9.37e-15!53;CL:0000623!3.30e-11!3;CL:0000825!3.30e-11!3;CL:0000842!5.50e-11!3;CL:0000738!8.10e-10!140;CL:0002087!2.53e-09!119;CL:0000224!2.44e-08!4;CL:0000037!6.79e-07!172;CL:0000566!6.79e-07!172;CL:0002031!7.06e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000625;1.05e-23;11!CL:0000791;8.27e-15;18!CL:0000789;8.27e-15;18!CL:0002419;8.27e-15;18!CL:0000084;7.16e-11;25!CL:0000623;9.90e-11;3 | |ontology_enrichment_celltype_v019=CL:0000625;1.05e-23;11!CL:0000791;8.27e-15;18!CL:0000789;8.27e-15;18!CL:0002419;8.27e-15;18!CL:0000084;7.16e-11;25!CL:0000623;9.90e-11;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000625,1.14e-23,11;CL:0000791,8.67e-15,18;CL:0000789,8.67e-15,18;CL:0002420,8.67e-15,18;CL:0002419,8.67e-15,18;CL:0000790,8.67e-15,18;CL:0000084,7.41e-11,25;CL:0000827,7.41e-11,25;CL:0000623,1.09e-10,3;CL:0000825,1.09e-10,3;CL:0000838,3.76e-09,52;CL:0000542,5.49e-09,53;CL:0000051,5.49e-09,53 | |||
|ontology_enrichment_development_v019=CL:0000790;8.27e-15;18 | |ontology_enrichment_development_v019=CL:0000790;8.27e-15;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!5.39e-09!4;UBERON:0005058!5.39e-09!4;UBERON:0009113!5.39e-09!4;UBERON:0003295!5.39e-09!4;UBERON:0005562!5.39e-09!4;UBERON:0004177!2.25e-08!7 | |ontology_enrichment_uberon=UBERON:0002370!5.39e-09!4;UBERON:0005058!5.39e-09!4;UBERON:0009113!5.39e-09!4;UBERON:0003295!5.39e-09!4;UBERON:0005562!5.39e-09!4;UBERON:0004177!2.25e-08!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.13e-57;2!UBERON:0005058;1.13e-57;2!UBERON:0009113;1.13e-57;2!UBERON:0004177;8.09e-24;5!UBERON:0005057;8.09e-24;5 | |ontology_enrichment_uberon_v019=UBERON:0002370;1.13e-57;2!UBERON:0005058;1.13e-57;2!UBERON:0009113;1.13e-57;2!UBERON:0004177;8.09e-24;5!UBERON:0005057;8.09e-24;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.78e-29,4;UBERON:0005058,1.78e-29,4;UBERON:0009113,1.78e-29,4;UBERON:0003295,1.78e-29,4;UBERON:0005562,1.78e-29,4;UBERON:0003351,4.86e-20,6;UBERON:0004177,2.46e-17,7;UBERON:0005057,2.46e-17,7;UBERON:0000974,1.89e-12,10;UBERON:0003408,1.89e-12,10;UBERON:0001042,1.89e-12,10;UBERON:0009145,1.89e-12,10;UBERON:0006562,2.07e-11,11;UBERON:0009722,2.07e-11,11;UBERON:0007690,2.07e-11,11;UBERON:0008814,2.44e-07,18;UBERON:0001557,5.34e-07,19 | |||
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| ||
|short_description=p11@STIM1 | |short_description=p11@STIM1 | ||
}} | }} |
Latest revision as of 22:47, 17 September 2015
Short description: | p11@STIM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_STIM1_5end |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | 22bp_to_ENST00000532990_5end |
EntrezGene: | STIM1 |
HGNC: | 11386 |
UniProt: | E9PR07 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 1.14e-23 | 11 |
mature alpha-beta T cell | 8.67e-15 | 18 |
alpha-beta T cell | 8.67e-15 | 18 |
immature T cell | 8.67e-15 | 18 |
mature T cell | 8.67e-15 | 18 |
immature alpha-beta T cell | 8.67e-15 | 18 |
T cell | 7.41e-11 | 25 |
pro-T cell | 7.41e-11 | 25 |
natural killer cell | 1.09e-10 | 3 |
pro-NK cell | 1.09e-10 | 3 |
lymphoid lineage restricted progenitor cell | 3.76e-09 | 52 |
lymphocyte | 5.49e-09 | 53 |
common lymphoid progenitor | 5.49e-09 | 53 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.78e-29 | 4 |
hemolymphoid system gland | 1.78e-29 | 4 |
thymic region | 1.78e-29 | 4 |
pharyngeal gland | 1.78e-29 | 4 |
thymus primordium | 1.78e-29 | 4 |
pharyngeal epithelium | 4.86e-20 | 6 |
hemopoietic organ | 2.46e-17 | 7 |
immune organ | 2.46e-17 | 7 |
neck | 1.89e-12 | 10 |
gland of gut | 1.89e-12 | 10 |
chordate pharynx | 1.89e-12 | 10 |
pharyngeal region of foregut | 1.89e-12 | 10 |
pharynx | 2.07e-11 | 11 |
entire pharyngeal arch endoderm | 2.07e-11 | 11 |
early pharyngeal endoderm | 2.07e-11 | 11 |
pharyngeal arch system | 2.44e-07 | 18 |
upper respiratory tract | 5.34e-07 | 19 |