FFCP PHASE1:Hg19::chr1:39670475..39670506,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23499 | |EntrezGene=23499 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13664 | |HGNC=13664 | ||
|TSSclassifier=strong | |||
|UniProt=B4E2T3 | |UniProt=B4E2T3 | ||
|association_with_transcript=52bp_to_ENST00000536367,uc010oit.1_5end | |association_with_transcript=52bp_to_ENST00000536367,uc010oit.1_5end | ||
|cluster_id=chr1:39670475..39670506,+ | |||
|coexpression_cluster_id=C3979 | |||
|description=CAGE_peak_4_at_MACF1_5end | |description=CAGE_peak_4_at_MACF1_5end | ||
|id=chr1:39670475..39670506,+ | |id=chr1:39670475..39670506,+ | ||
|ontology_enrichment_celltype=CL:0000763!3.00e-12!112;CL:0000049!3.00e-12!112;CL:0000037!1.89e-08!172;CL:0000566!1.89e-08!172;CL:0000048!6.60e-08!430;CL:0002032!9.26e-08!165;CL:0000837!9.26e-08!165;CL:0000988!2.14e-07!182;CL:0000723!7.77e-07!436;CL:0000557!7.85e-07!71 | |ontology_enrichment_celltype=CL:0000763!3.00e-12!112;CL:0000049!3.00e-12!112;CL:0000037!1.89e-08!172;CL:0000566!1.89e-08!172;CL:0000048!6.60e-08!430;CL:0002032!9.26e-08!165;CL:0000837!9.26e-08!165;CL:0000988!2.14e-07!182;CL:0000723!7.77e-07!436;CL:0000557!7.85e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.51e-08;33!CL:0002057;2.51e-08;33!CL:0000473;1.85e-07;39!CL:0000234;1.85e-07;39!CL:0000763;5.63e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.65e-12,108;CL:0000049,1.65e-12,108;CL:0000037,1.04e-08,168;CL:0002032,4.10e-08,161;CL:0000837,4.10e-08,161;CL:0000048,1.21e-07,427;CL:0000988,2.22e-07,177;CL:0000557,2.51e-07,67;CL:0000839,6.64e-07,66 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!1.16e-11!31;DOID:1240!4.99e-10!39;DOID:2531!7.30e-07!51;DOID:0060083!7.30e-07!51 | |ontology_enrichment_disease=DOID:8692!1.16e-11!31;DOID:1240!4.99e-10!39;DOID:2531!7.30e-07!51;DOID:0060083!7.30e-07!51 | ||
|ontology_enrichment_disease_v019=DOID:8692;1.43e-11;31!DOID:1240;3.05e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,8.88e-12,31;DOID:1240,3.15e-10,39;DOID:2531,7.33e-07,51;DOID:0060083,7.33e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0003081!2.64e-09!216;UBERON:0002204!6.23e-08!167;UBERON:0001009!2.40e-07!113;UBERON:0004535!2.42e-07!110;UBERON:0004872!3.33e-07!84;UBERON:0007023!4.90e-07!115 | |ontology_enrichment_uberon=UBERON:0003081!2.64e-09!216;UBERON:0002204!6.23e-08!167;UBERON:0001009!2.40e-07!113;UBERON:0004535!2.42e-07!110;UBERON:0004872!3.33e-07!84;UBERON:0007023!4.90e-07!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,1.19e-10,203;UBERON:0000926,7.53e-08,315;UBERON:0004120,7.53e-08,315;UBERON:0006603,7.53e-08,315;UBERON:0002204,4.05e-07,167;UBERON:0004872,8.55e-07,83 | |||
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| ||
|short_description=p4@MACF1 | |short_description=p4@MACF1 | ||
}} | }} |
Latest revision as of 23:32, 17 September 2015
Short description: | p4@MACF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MACF1_5end |
Coexpression cluster: | C3979_Mast_acute_chronic_granulocyte_Fibroblast_mesodermal_epithelioid |
Association with transcript: | 52bp_to_ENST00000536367, uc010oit.1_5end |
EntrezGene: | MACF1 |
HGNC: | 13664 |
UniProt: | B4E2T3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.65e-12 | 108 |
common myeloid progenitor | 1.65e-12 | 108 |
hematopoietic stem cell | 1.04e-08 | 168 |
hematopoietic oligopotent progenitor cell | 4.10e-08 | 161 |
hematopoietic multipotent progenitor cell | 4.10e-08 | 161 |
multi fate stem cell | 1.21e-07 | 427 |
hematopoietic cell | 2.22e-07 | 177 |
granulocyte monocyte progenitor cell | 2.51e-07 | 67 |
myeloid lineage restricted progenitor cell | 6.64e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 1.19e-10 | 203 |
mesoderm | 7.53e-08 | 315 |
mesoderm-derived structure | 7.53e-08 | 315 |
presumptive mesoderm | 7.53e-08 | 315 |
musculoskeletal system | 4.05e-07 | 167 |
splanchnic layer of lateral plate mesoderm | 8.55e-07 | 83 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 8.88e-12 | 31 |
leukemia | 3.15e-10 | 39 |
hematologic cancer | 7.33e-07 | 51 |
immune system cancer | 7.33e-07 | 51 |