FFCP PHASE1:Hg19::chr3:33482052..33482116,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:33482052..33482116,-
|short_description=p2@UBP1
|description=CAGE_peak_2_at_UBP1_5end
|association_with_transcript=0bp_to_ENST00000456378_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7342 | |EntrezGene=7342 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12507 | |HGNC=12507 | ||
|TSSclassifier=strong | |||
|UniProt=C9JWL3 | |UniProt=C9JWL3 | ||
|association_with_transcript=0bp_to_ENST00000456378_5end | |||
|cluster_id=chr3:33482052..33482116,- | |||
|description=CAGE_peak_2_at_UBP1_5end | |||
|id=chr3:33482052..33482116,- | |||
|ontology_enrichment_celltype=CL:0000542!7.04e-09!53;CL:0000051!7.04e-09!53;CL:0000838!9.99e-09!52;CL:0000791!2.10e-08!18;CL:0000789!2.10e-08!18;CL:0002420!2.10e-08!18;CL:0002419!2.10e-08!18;CL:0000790!2.10e-08!18;CL:0002139!1.29e-07!24;CL:0000084!3.28e-07!25;CL:0000827!3.28e-07!25;CL:0000115!3.98e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.58e-10;18!CL:0000789;1.58e-10;18!CL:0002419;1.58e-10;18!CL:0002139;3.36e-08;24!CL:0000084;1.25e-07;25!CL:0000625;1.54e-07;11!CL:0000115;8.57e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.60e-10,18;CL:0000789,1.60e-10,18;CL:0002420,1.60e-10,18;CL:0002419,1.60e-10,18;CL:0000790,1.60e-10,18;CL:0000542,2.48e-08,53;CL:0000051,2.48e-08,53;CL:0000838,3.94e-08,52;CL:0002139,4.62e-08,24;CL:0000084,1.35e-07,25;CL:0000827,1.35e-07,25;CL:0000115,1.72e-07,36;CL:0000625,1.86e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;1.58e-10;18!UBERON:0006601;2.03e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.61e-37!115;UBERON:0000073!8.05e-22!94;UBERON:0001016!8.05e-22!94;UBERON:0001049!3.58e-21!57;UBERON:0005068!3.58e-21!57;UBERON:0006241!3.58e-21!57;UBERON:0007135!3.58e-21!57;UBERON:0005743!5.15e-21!86;UBERON:0001017!1.00e-20!82;UBERON:0003080!4.64e-19!42;UBERON:0002780!5.61e-19!41;UBERON:0001890!5.61e-19!41;UBERON:0006240!5.61e-19!41;UBERON:0002346!1.06e-17!90;UBERON:0001869!1.07e-17!32;UBERON:0001893!2.18e-17!34;UBERON:0002020!3.93e-17!34;UBERON:0003528!3.93e-17!34;UBERON:0002616!5.96e-17!59;UBERON:0002791!9.30e-17!33;UBERON:0000955!4.88e-16!69;UBERON:0006238!4.88e-16!69;UBERON:0003075!6.23e-16!86;UBERON:0007284!6.23e-16!86;UBERON:0002619!1.04e-14!22;UBERON:0000956!4.41e-14!25;UBERON:0000203!4.41e-14!25;UBERON:0001950!1.38e-13!20;UBERON:0003056!3.28e-13!61;UBERON:0000924!3.92e-09!173;UBERON:0006601!3.92e-09!173;UBERON:0000153!1.81e-08!129;UBERON:0007811!1.81e-08!129;UBERON:0004121!4.99e-08!169;UBERON:0000033!4.46e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;3.21e-20;32!UBERON:0002619;6.59e-20;22!UBERON:0001893;6.70e-19;34!UBERON:0002791;9.85e-19;32!UBERON:0003528;1.13e-18;34!UBERON:0002020;1.13e-18;34!UBERON:0001950;2.12e-18;20!UBERON:0000956;1.59e-17;25!UBERON:0000203;1.59e-17;25!UBERON:0002780;6.98e-17;41!UBERON:0001890;6.98e-17;41!UBERON:0000073;9.31e-14;53!UBERON:0002616;9.31e-14;53!UBERON:0007023;4.98e-12;114!UBERON:0000955;3.70e-10;68!UBERON:0001017;1.73e-09;75!UBERON:0001016;7.42e-09;83!UBERON:0000922;1.12e-08;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.14e-43,114;UBERON:0001017,5.55e-25,81;UBERON:0001016,1.19e-24,89;UBERON:0000073,1.29e-24,53;UBERON:0002616,1.29e-24,53;UBERON:0001049,1.45e-24,56;UBERON:0005068,1.45e-24,56;UBERON:0006241,1.45e-24,56;UBERON:0007135,1.45e-24,56;UBERON:0002780,2.20e-23,41;UBERON:0001890,2.20e-23,41;UBERON:0003080,2.20e-23,41;UBERON:0006240,2.20e-23,41;UBERON:0001869,1.77e-22,32;UBERON:0001893,1.05e-21,34;UBERON:0003528,2.31e-21,34;UBERON:0002020,2.31e-21,34;UBERON:0002791,1.57e-20,32;UBERON:0002346,2.86e-20,86;UBERON:0000955,7.68e-20,68;UBERON:0006238,7.68e-20,68;UBERON:0002619,7.99e-20,22;UBERON:0001950,2.91e-18,20;UBERON:0003075,6.18e-18,82;UBERON:0007284,6.18e-18,82;UBERON:0000956,1.80e-17,25;UBERON:0000203,1.80e-17,25;UBERON:0003056,6.60e-16,61;UBERON:0010371,2.77e-11,104;UBERON:0004121,6.22e-10,171;UBERON:0000924,6.22e-10,171;UBERON:0006601,6.22e-10,171;UBERON:0010314,5.30e-09,132;UBERON:0011216,1.94e-08,223;UBERON:0000025,2.54e-07,192 | |||
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| ||
|short_description=p2@UBP1 | |||
}} | }} |
Latest revision as of 00:21, 18 September 2015
Short description: | p2@UBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_UBP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000456378_5end |
EntrezGene: | UBP1 |
HGNC: | 12507 |
UniProt: | C9JWL3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.60e-10 | 18 |
alpha-beta T cell | 1.60e-10 | 18 |
immature T cell | 1.60e-10 | 18 |
mature T cell | 1.60e-10 | 18 |
immature alpha-beta T cell | 1.60e-10 | 18 |
lymphocyte | 2.48e-08 | 53 |
common lymphoid progenitor | 2.48e-08 | 53 |
lymphoid lineage restricted progenitor cell | 3.94e-08 | 52 |
endothelial cell of vascular tree | 4.62e-08 | 24 |
T cell | 1.35e-07 | 25 |
pro-T cell | 1.35e-07 | 25 |
endothelial cell | 1.72e-07 | 36 |
CD8-positive, alpha-beta T cell | 1.86e-07 | 11 |