FFCP PHASE1:Hg19::chr4:54930662..54930701,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26511 | |EntrezGene=26511 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1935 | |HGNC=1935 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UKJ5 | |UniProt=Q9UKJ5 | ||
|association_with_transcript=86bp_to_uc003haj.1_5end | |association_with_transcript=86bp_to_uc003haj.1_5end | ||
|cluster_id=chr4:54930662..54930701,- | |||
|coexpression_cluster_id=C443 | |||
|description=CAGE_peak_3_at_CHIC2_5end | |description=CAGE_peak_3_at_CHIC2_5end | ||
|id=chr4:54930662..54930701,- | |id=chr4:54930662..54930701,- | ||
|ontology_enrichment_celltype=CL:0000738!1.64e-23!140;CL:0000988!2.93e-22!182;CL:0000037!1.10e-21!172;CL:0000566!1.10e-21!172;CL:0002087!3.92e-20!119;CL:0002031!4.61e-19!124;CL:0002032!4.79e-19!165;CL:0000837!4.79e-19!165;CL:0002057!2.01e-15!42;CL:0000860!1.18e-12!45;CL:0000048!1.27e-12!430;CL:0000134!1.32e-12!358;CL:0000838!1.84e-12!52;CL:0000034!4.23e-12!444;CL:0000791!4.84e-12!18;CL:0000789!4.84e-12!18;CL:0002420!4.84e-12!18;CL:0002419!4.84e-12!18;CL:0000790!4.84e-12!18;CL:0000723!5.74e-12!436;CL:0000542!7.10e-12!53;CL:0000051!7.10e-12!53;CL:0000084!8.84e-12!25;CL:0000827!8.84e-12!25;CL:0002320!9.90e-12!365;CL:0000766!1.01e-10!76;CL:0002371!5.22e-10!591;CL:0000763!1.52e-08!112;CL:0000049!1.52e-08!112;CL:0000003!1.77e-08!722;CL:0000625!2.59e-08!11;CL:0002009!3.02e-08!65;CL:0000557!3.52e-08!71;CL:0000115!4.72e-08!35;CL:0000219!6.03e-08!390;CL:0002194!7.98e-08!63;CL:0000576!7.98e-08!63;CL:0000040!7.98e-08!63;CL:0000559!7.98e-08!63;CL:0002139!1.10e-07!24;CL:0000839!1.85e-07!70;CL:0000144!1.90e-07!625 | |ontology_enrichment_celltype=CL:0000738!1.64e-23!140;CL:0000988!2.93e-22!182;CL:0000037!1.10e-21!172;CL:0000566!1.10e-21!172;CL:0002087!3.92e-20!119;CL:0002031!4.61e-19!124;CL:0002032!4.79e-19!165;CL:0000837!4.79e-19!165;CL:0002057!2.01e-15!42;CL:0000860!1.18e-12!45;CL:0000048!1.27e-12!430;CL:0000134!1.32e-12!358;CL:0000838!1.84e-12!52;CL:0000034!4.23e-12!444;CL:0000791!4.84e-12!18;CL:0000789!4.84e-12!18;CL:0002420!4.84e-12!18;CL:0002419!4.84e-12!18;CL:0000790!4.84e-12!18;CL:0000723!5.74e-12!436;CL:0000542!7.10e-12!53;CL:0000051!7.10e-12!53;CL:0000084!8.84e-12!25;CL:0000827!8.84e-12!25;CL:0002320!9.90e-12!365;CL:0000766!1.01e-10!76;CL:0002371!5.22e-10!591;CL:0000763!1.52e-08!112;CL:0000049!1.52e-08!112;CL:0000003!1.77e-08!722;CL:0000625!2.59e-08!11;CL:0002009!3.02e-08!65;CL:0000557!3.52e-08!71;CL:0000115!4.72e-08!35;CL:0000219!6.03e-08!390;CL:0002194!7.98e-08!63;CL:0000576!7.98e-08!63;CL:0000040!7.98e-08!63;CL:0000559!7.98e-08!63;CL:0002139!1.10e-07!24;CL:0000839!1.85e-07!70;CL:0000144!1.90e-07!625 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.44e-14;33!CL:0002057;7.44e-14;33!CL:0000791;3.05e-12;18!CL:0000789;3.05e-12;18!CL:0002419;3.05e-12;18!CL:0000084;7.89e-12;25!CL:0000576;9.15e-09;48!CL:0002087;1.12e-08;104!CL:0000473;1.34e-08;39!CL:0000234;1.34e-08;39!CL:0000625;1.80e-08;11!CL:0002139;5.70e-08;24!CL:0000542;6.18e-08;53!CL:0000115;2.78e-07;36!CL:0000071;9.77e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,8.89e-26,136;CL:0000988,8.58e-24,177;CL:0000037,1.85e-23,168;CL:0002087,1.54e-22,115;CL:0002031,2.53e-21,120;CL:0002032,1.04e-20,161;CL:0000837,1.04e-20,161;CL:0000860,1.53e-15,42;CL:0002057,1.53e-15,42;CL:0000134,3.42e-13,354;CL:0000766,5.33e-13,72;CL:0000048,9.86e-13,427;CL:0000838,2.73e-12,52;CL:0002320,2.83e-12,361;CL:0000034,3.53e-12,441;CL:0000791,3.93e-12,18;CL:0000789,3.93e-12,18;CL:0002420,3.93e-12,18;CL:0002419,3.93e-12,18;CL:0000790,3.93e-12,18;CL:0000723,4.39e-12,433;CL:0000084,7.22e-12,25;CL:0000827,7.22e-12,25;CL:0000473,8.10e-12,48;CL:0000234,8.10e-12,48;CL:0000542,1.04e-11,53;CL:0000051,1.04e-11,53;CL:0002009,2.45e-10,61;CL:0000557,3.80e-10,67;CL:0000763,6.84e-10,108;CL:0000049,6.84e-10,108;CL:0002194,7.03e-10,59;CL:0000576,7.03e-10,59;CL:0000040,7.03e-10,59;CL:0000559,7.03e-10,59;CL:0000839,2.56e-09,66;CL:0000625,2.26e-08,11;CL:0000219,2.27e-08,386;CL:0000115,3.21e-08,36;CL:0002139,9.69e-08,24 | |||
|ontology_enrichment_development_v019=CL:0000790;3.05e-12;18!CL:0002057;1.42e-11;42!CL:0000051;6.18e-08;53!CL:0002546;9.77e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.57e-15!216;UBERON:0002193!3.82e-14!112;UBERON:0002390!2.34e-12!102;UBERON:0003061!2.34e-12!102;UBERON:0004535!3.93e-11!110;UBERON:0002384!1.70e-10!375;UBERON:0002405!3.67e-10!115;UBERON:0001009!3.82e-10!113;UBERON:0000055!1.57e-09!69;UBERON:0000178!5.13e-09!15;UBERON:0000179!5.13e-09!15;UBERON:0000463!5.13e-09!15;UBERON:0001981!1.35e-08!60;UBERON:0007500!1.35e-08!60;UBERON:0004537!1.35e-08!60;UBERON:0006965!1.35e-08!60;UBERON:0002049!1.01e-07!79;UBERON:0007798!1.01e-07!79;UBERON:0004872!4.40e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.25e-09;15!UBERON:0000179;3.25e-09;15!UBERON:0000463;3.25e-09;15!UBERON:0004638;9.77e-07;18!UBERON:0001986;9.77e-07;18!UBERON:0004852;9.77e-07;18 | |||
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| ||
|short_description=p3@CHIC2 | |short_description=p3@CHIC2 | ||
}} | }} |
Latest revision as of 00:36, 18 September 2015
Short description: | p3@CHIC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CHIC2_5end |
Coexpression cluster: | C443_CD4_CD8_Natural_Eosinophils_Neutrophils_Peripheral_blood |
Association with transcript: | 86bp_to_uc003haj.1_5end |
EntrezGene: | CHIC2 |
HGNC: | 1935 |
UniProt: | Q9UKJ5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 1.91e-20 | 203 |
hemolymphoid system | 2.16e-16 | 108 |
hematopoietic system | 1.59e-14 | 98 |
blood island | 1.59e-14 | 98 |
cardiovascular system | 3.76e-11 | 109 |
connective tissue | 4.94e-11 | 371 |
immune system | 1.91e-10 | 93 |
circulatory system | 3.53e-10 | 112 |
vessel | 1.11e-09 | 68 |
blood | 4.42e-09 | 15 |
haemolymphatic fluid | 4.42e-09 | 15 |
organism substance | 4.42e-09 | 15 |
epithelial tube open at both ends | 9.67e-09 | 59 |
blood vessel | 9.67e-09 | 59 |
blood vasculature | 9.67e-09 | 59 |
vascular cord | 9.67e-09 | 59 |
mesoderm | 6.65e-08 | 315 |
mesoderm-derived structure | 6.65e-08 | 315 |
presumptive mesoderm | 6.65e-08 | 315 |
vasculature | 1.18e-07 | 78 |
vascular system | 1.18e-07 | 78 |
bone marrow | 1.81e-07 | 76 |
splanchnic layer of lateral plate mesoderm | 3.14e-07 | 83 |
bone element | 3.16e-07 | 82 |