FFCP PHASE1:Hg19::chr2:66662281..66662308,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4211 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7000 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000491706_5end | |||
|cluster_id=chr2:66662281..66662308,+ | |||
|coexpression_cluster_id=C1912 | |||
|description=CAGE_peak_1_at_MEIS1_5end | |||
|id=chr2:66662281..66662308,+ | |||
|ontology_enrichment_celltype=CL:0000187!2.96e-11!54;CL:0000192!4.90e-11!42;CL:0000514!4.90e-11!42;CL:0000680!5.24e-11!57;CL:0000056!5.24e-11!57;CL:0000355!5.24e-11!57;CL:0000183!2.13e-10!59;CL:0000393!3.67e-09!60;CL:0000211!3.67e-09!60;CL:0000055!6.83e-08!180;CL:0000359!2.11e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0000192;7.45e-09;43!CL:0000359;2.95e-07;32!CL:0000187;5.82e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,7.67e-12,43;CL:0000514,7.67e-12,43;CL:0000187,8.09e-12,55;CL:0000680,1.46e-11,58;CL:0000056,1.46e-11,58;CL:0000355,1.46e-11,58;CL:0000393,5.53e-10,61;CL:0000211,5.53e-10,61;CL:0000359,1.45e-07,32 | |||
|ontology_enrichment_development_v019=CL:0000514;7.45e-09;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.84e-16!365;UBERON:0000481!9.04e-16!347;UBERON:0000468!2.95e-14!659;UBERON:0004111!2.47e-12!241;UBERON:0002385!1.57e-11!63;UBERON:0001015!1.57e-11!63;UBERON:0000383!1.57e-11!63;UBERON:0004290!1.67e-11!70;UBERON:0001134!5.15e-11!61;UBERON:0002036!5.15e-11!61;UBERON:0003082!5.15e-11!61;UBERON:0004872!1.01e-10!84;UBERON:0000477!1.20e-10!286;UBERON:0007023!1.30e-10!115;UBERON:0000483!1.71e-10!309;UBERON:0000025!2.62e-10!194;UBERON:0000486!4.64e-10!82;UBERON:0000480!5.84e-10!626;UBERON:0000467!5.98e-10!625;UBERON:0000119!1.23e-09!312;UBERON:0000914!3.17e-09!83;UBERON:0002329!3.17e-09!83;UBERON:0003077!3.17e-09!83;UBERON:0003059!3.17e-09!83;UBERON:0007282!3.17e-09!83;UBERON:0009618!3.17e-09!83;UBERON:0007285!3.17e-09!83;UBERON:0002100!4.97e-09!216;UBERON:0003104!5.86e-09!238;UBERON:0009142!5.86e-09!238;UBERON:0000922!2.54e-08!612;UBERON:0002050!3.47e-08!605;UBERON:0005423!3.47e-08!605;UBERON:0000064!5.18e-08!219;UBERON:0000923!7.09e-08!604;UBERON:0005291!7.09e-08!604;UBERON:0006598!7.09e-08!604;UBERON:0002532!7.09e-08!604;UBERON:0001637!9.66e-08!42;UBERON:0003509!9.66e-08!42;UBERON:0004572!9.66e-08!42;UBERON:0001981!1.94e-07!60;UBERON:0007500!1.94e-07!60;UBERON:0004537!1.94e-07!60;UBERON:0006965!1.94e-07!60;UBERON:0004573!3.60e-07!33;UBERON:0004571!3.60e-07!33;UBERON:0005256!4.26e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0001135;9.90e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,3.89e-12,73;UBERON:0002385,4.15e-12,64;UBERON:0001015,4.15e-12,64;UBERON:0000383,4.15e-12,64;UBERON:0002329,5.08e-12,71;UBERON:0003059,5.08e-12,71;UBERON:0007282,5.08e-12,71;UBERON:0004290,5.08e-12,71;UBERON:0009618,5.08e-12,71;UBERON:0003077,5.99e-12,72;UBERON:0007285,5.99e-12,72;UBERON:0001134,1.43e-11,62;UBERON:0002036,1.43e-11,62;UBERON:0003082,1.43e-11,62;UBERON:0007503,5.61e-11,78;UBERON:0004111,9.52e-11,240;UBERON:0004872,2.26e-10,83;UBERON:0000486,3.02e-10,83;UBERON:0000483,3.05e-10,306;UBERON:0007023,5.35e-10,114;UBERON:0002050,9.26e-10,564;UBERON:0000923,1.17e-09,560;UBERON:0010316,1.17e-09,560;UBERON:0005291,1.17e-09,560;UBERON:0006598,1.17e-09,560;UBERON:0010317,1.17e-09,560;UBERON:0002532,1.17e-09,560;UBERON:0000119,1.48e-09,309;UBERON:0005256,2.00e-09,122;UBERON:0000025,6.37e-09,192;UBERON:0005423,2.08e-08,581;UBERON:0003104,2.15e-08,160;UBERON:0009142,2.15e-08,160;UBERON:0002346,3.98e-08,86;UBERON:0002100,6.35e-08,199;UBERON:0011216,6.39e-08,223;UBERON:0000922,7.13e-08,592;UBERON:0001637,1.27e-07,42;UBERON:0003509,1.27e-07,42;UBERON:0004572,1.27e-07,42;UBERON:0000479,2.59e-07,773;UBERON:0004573,3.28e-07,33;UBERON:0004571,3.28e-07,33;UBERON:0010314,3.73e-07,132;UBERON:0007500,3.92e-07,59;UBERON:0001981,3.92e-07,59;UBERON:0004537,3.92e-07,59;UBERON:0006965,3.92e-07,59;UBERON:0003075,6.45e-07,82;UBERON:0007284,6.45e-07,82;UBERON:0001135,9.55e-07,15 | |||
|phase1_expression=7.99384868790449,5.78071414505655,14.518303621885,15.0109947529696,25.0298212879281,18.3191090061077,0,3.15859936713415,2.87304191019822,3.93174298402414,1.39560233594486,8.08233076881637,4.48403862988371,6.18831764800233,5.30235801164665,25.5483555651675,13.8619741445515,13.8758917173601,17.5655807564582,13.0508321561395,7.34402488479311,11.9112794161673,5.43848375549008,3.55873505189499,7.03038781730896,0,0,0.0787107813136792,0.786728553697808,0.383829398097213,2.32224184974114,8.27479102031034,4.2168828628955,4.80680213216824,0,0,12.0376180127287,0.553995408531877,0,0.217010870715852,0.223915474239924,0,0.257575567634187,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0.251248665256743,0,0,9.08099253950053,0,0,0,0,0.209658645508376,0,0,0.32145117339416,0,0,0,0,0,0,0,0.800791974072025,0.574752439954483,0,0,0,0,0.382273228125229,10.5737062863221,17.9362740154092,10.5353633910031,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0,0.267440195783507,0,26.8187552945358,16.7675214925909,2.42938867502708,1.80719576192283,4.01070328508712,1.44846518960824,0.795285947051099,1.94653948121054,26.0916095372827,18.8469987843179,17.5669571386252,9.36500389808645,2.5500670180478,10.0111799551796,0,0,0.132957960518865,0.715471872916026,2.28797964312051,1.48583000531826,1.98762407366705,1.72046919021225,4.51282652089873,4.52246353539208,2.51699661725944,0.825354125820202,5.22487416342026,0,1.42306505074684,0.33472061276467,1.61131726843659,2.28081631715554,0,0.735326160691737,1.62028389576352,2.67899184852239,2.69435247151404,1.91439516821648,7.66583187329416,0,2.38162267109529,0,0,2.61656431285521,4.96971951695318,4.30543739659571,21.8475148341811,34.1335578691088,8.51204117276057,3.92474320099615,7.47242970107935,5.18001851676036,5.60179863719579,3.90660949002095,7.84617134944602,0.302714855289863,0,0.234321431833797,0.312160076830321,9.12754914471119,3.43731965269142,4.46251094846307,5.17993421978021,4.77532742787645,0.204154171254893,0.368502951935304,0.309977343527296,0,0,6.37112953356618,5.74894513452991,1.85169725349473,1.00094815897571,0.277064115484183,0.438977620880838,1.22595118319608,0.901428353439581,3.17610112848059,12.5572744982203,5.76604949810132,6.56988893594642,19.8060123415706,9.58388521917482,28.5980999450648,8.56137539125313,15.0210935694727,9.74370051611986,14.8935926804028,6.53554280360325,2.10139873864455,24.1406522911298,9.36994513517054,20.0081498926375,1.15956511897978,0.818238361772504,2.58124135850103,0,0.397589304964456,3.137236457477,3.10983165046111,0.504641701751257,0.72995471815166,6.25798129319264,7.71889125831462,9.66944449467364,6.50115099244771,5.77503585335668,1.8929088006375,1.34867752062481,2.89213235860178,2.31617342738027,2.17879444092406,2.60997681022206,1.34831308160164,1.56977172100277,4.23221872641029,10.3341763647451,2.80483547606892,18.520830509913,13.2307840246988,1.26755034821831,0,2.95394953340702,0,0.491953754172454,7.72055146343365,0.439001141634502,0,1.00528972411631,3.98130314181677,0.651616610620649,0,4.3299402607582,17.0417695313363,8.10119990227169,1.73239737313289,0.462985512576611,1.90254152234598,9.4824527755113,7.72637545885385,0,0,0,0,1.6798212819886,2.1266264586358,0.179117045405697,0,0.383382679165211,0,0,0,0,0.37872730027914,1.0159663086747,1.14596527667483,2.34434894420094,6.84289784090821,1.43958489784653,0.901029173531752,0.571652865261156,0,0,0,6.72212921940444,0,2.535908257668,15.1584726453376,23.9217104896142,1.80045161983499,1.41849132023278,1.3321108950805,29.7394226808947,31.4720531127037,13.9950857252731,1.30294473717494,22.3896927707804,6.33561498346743,9.94749944296634,5.22920075160176,11.7968129594827,0,0,0,2.87549826589899,4.59447743336456,8.5582143024431,3.61953266668948,3.49309748335652,2.14873155887875,0,0.197030760201927,0.215627574859517,0.385029108839245,9.14740647200868,2.60279707715243,3.09315525111078,3.85287410269002,3.82763250991898,0,0,0,3.55805325985506,1.50051156317903,0.271265023699736,0.415941723061614,0.535286966391485,0.157702415033935,0.702848489956279,4.51419149591578,4.5481500811197,2.0694614258501,2.65690239414175,2.58116835958384,20.938951086808,1.56640925970192,0.686286847621712,0,0,0.106727557803444,1.21251028578504,6.65741758041988,5.14063498660456,2.23297027036899,11.8165719431808,5.3325417942284,7.30393150757495,7.67560873600055,10.6163587954781,11.8734453155993,4.47208112027701,2.30830242907065,3.20295908453856,4.67328986265259,4.18357362455853,0.604297247958111,1.40354529212299,2.02578175658972,18.3703117063371,13.6568376005038,24.7825144273312,0.902399225814824,0.385076685522074,1.56869953835371,0,0.527758144464379,2.27466768141793,1.19065593693561,3.02282282542995,0,5.96082162596476,4.01351819083883,0,0.831076008928724,0,0.657779629937804,0.522870902049801,2.05160100093111,3.93617574839647,0.650756789328606,6.59462474545423,0.824125183365091,0.742585499285292,0,0,11.2478750890912,0.870036464629098,5.08360436478326,5.37262861541453,3.85942402956686,5.47843248828196,2.61030049045611,2.98293195956353,1.78064071293475,3.63626813794152,1.53752053892085,8.16721359965339,2.93357564481095,7.90237433805386,28.018298867927,9.0614845120878,18.7900483907414,2.66153015158511,5.21959795245044,7.04232032594896,17.1749864090389,0.372158369359667,1.2655176988749,20.0161703620016,5.62975140884935,20.9690104136621,20.6832111151859,11.7742296029885,19.426225418998,25.8064807951891,22.9734184574089,5.66110948405285,3.17020642346017,6.31887684358472,5.85160486907508,14.1353823986145,7.39551027297288,20.7479865340138,20.0795713374272,23.731704490251,16.5409603063837,7.29782872765342,2.63070531152258,6.94530641120025,19.676842561399,6.49313206280653,5.88664646389525,8.73256367849948,6.02327679257016,4.02821068153797,6.06340787518125,30.1546904460008,1.26664581178598,4.61012850143863,0,0,5.19599408717765,6.70302275535787,1.08890984861323,7.43736026136555,3.44404298136984,1.68471475667626,2.21715076768338,1.83778720165568,0.507447609232169,2.29391162142713,0.569647187174163,0.476463550915578,0.822724546172388,1.94541993357815,1.08006287447623,0,0,0,1.22520107990516,0,0,0,0.637705090915289,8.58191297161111,6.8941933247652,9.94865838802249,0,12.6358730151056,0.912938716132769,0,45.1142058762121,31.4882706710982,0.1605880751037,0,9.36861722918718,26.7934168909497,0,0,0,16.2172119183693,1.39203086947621,0,5.95002492647163,0.33307196799782,4.22961015263549,0.37428108081644,2.05111450980652,0.849523652246594,1.5602073798847,0.568272293612826,6.20735660317994,9.79983446747707,9.21482106297696,1.9882952955326,1.68803299692615,2.89402633059555,0.16480387422676,0.422250816255987,20.7217907781113,17.1296027629312,2.51932747854276,1.84083628503879,0.246169610922139,8.3980688668688,0.629078458031288,0.179021174675609,13.3008816258987,22.1947662683101,2.3948309234694,8.89095921157095,1.93866549219044,2.41197055220813,3.99227596002388,0.520855522170466,1.74919999992391,12.3249927823915,0.910347586283997,1.77977555204936,0,1.72371686620732,16.9130675762288,7.46587478213157,13.2861207872076,3.37670028151142,103.755580695617,38.8133202358598,47.2876190325676,2.19385397153973,0.871507708151921,6.97118721393016,53.7112804356504,1.02547850262301,0.922255617552241,0.718061155278177,1.08647371922008,2.87101043758728,11.0833088016253,3.19820865611181,0,14.5991638447373,0.166211681900156,0.676786981851542,1.37243774022418,1.51039428278258,0,0.953619473882272,0.421996129056054,0.489698424477443,1.13082457147153,2.81305231664718,16.9194528283346,23.3527970288815,17.1088440581415,11.2678028898636,3.33622635155558,5.74320722280005,5.12248610653146,15.248975298677,8.90204893756289,0,4.89161547330224,0,14.5996229054275,24.1981432097328,9.48825561054519,0.126373159256976,4.96067284067825,3.94015127309539,0.664653872707185,0,0.627865836814451,1.19472429772959,1.13843818411917,1.24807205711825,2.77695581336209,0.685946781900644,1.30588809870604,15.9001268100247,2.0638323896594,1.64485763191445,1.5348756588099,1.56019368401098,15.8092096876124,0.0882561266915003,16.0446325954178,0.685209623233754,0.596143835108969,2.21587785845575,0.977756913674015,1.52301758477914,21.1318464791959,0.999048047910651,0.72045208577053,0,10.9820798631657,0.864328787928898,0.745515213392595,5.1852687615695,12.7749953709197,11.924724479606,3.67193583490758,1.44475294950759,9.00630433064684,4.65478288232776,5.10986352267889,0,0.788662062837943,7.81990723562312,8.24977526442061,7.17873024576814,4.19325901047881,7.2968428183217,10.489058499768,10.9509060153364,43.9565857921732,8.15471646692177,0.0787831823072236,0.329663433524666,0.404421263125109,0.590564889088493,0,5.56660782866512,1.49823746722733,0,0,0,0.899895566206002,3.0952078182318,2.61223093629506,5.36695500158826,2.60058834087354,21.6112903116192,0.422401346077626,0.179287339332845,2.68681276247223,17.1526878329608,7.94510364438518,29.2408818302962,9.77399283156683,7.77799342081141,13.0634944043764,0,0.164185041498678,16.5276381131859,3.73929902016415,0.58620893471233,3.97520666736664,13.8332763306859,9.38851472373099,0.342173675768659,2.11444506695002,10.8923160819049,43.3883882075078,24.4401042654845,6.94632430536731,2.17372795087739,0,0,10.33633826402,4.7631079864313,3.982492497925,2.62298104567844,1.72759505875258,0.886068179966986,3.66078794705889,1.8778639605975,17.2022758707021,7.98689171065336,5.65077266766589,0.553394539744923,1.99968652739371,0.303298235083296,1.14186133417987,3.2937214757744,0.468334905806882,3.62302571527063,6.11944691836184,4.20683957725004,11.6509230915549,2.27283606330107,5.0313580350515,3.55924488638614,4.80564143633539,7.71277711192519,8.70448323263571,14.3419495489945,13.8588187432421,22.9399587203438,16.3026104720072,33.1764966272684,9.03861829497182,14.0871166689168,32.305385934402,9.13932509205109,10.5786390633212,13.4568007809894,9.88177124790894,13.4569790364763,11.9428766609585,2.00013882331577,9.27168403993541,9.09223619667982,1.26184898228651,0.192619830407303,0.643324774124777,0,1.36023555307363,0.694567422971502,0.97894681802587,0.358177682162975,0,1.97355644620836,1.94358060540469,0.192914038270915,0.168942440653073,0.512483037175893,0,1.21543982470953,3.594719339945,0.194860308839388,0.398594520940089,2.78061170234935,0.982829546539238,0.983091635014877,0,2.19986135440423,0.426766918776564,2.2387947355906,0.567515953566836,0.920529751259204,4.75590326246111,13.0636224606924,37.2172620493626,15.9580720867089,36.1711666268562,19.7669445127545,37.1714240599315,46.9790573424719,19.9536580456994,68.1546799927357,5.72407831176153,0.23658523500376,0.80057074828547,7.40619481750436,12.249819094128,2.44071055366546,4.25089728976755,2.55414174491442,2.46139637088906,4.78936222821264,1.79808856406967,2.74508597574147,19.9877188362816,1.86480665151949,2.12345502025933,1.46742878817343,2.31051332300676,1.90691047733584,2.7614397042404,2.18807844327902,24.5185670418579,3.83239630536688,17.9748222583611,1.04762677792569,1.31017534008077,0.443568258651136,2.09366512317023,3.12431239445539,2.27355476151302,1.96589011601111,14.7683198434919,18.6407640731442,18.8560247787932,5.27613733078862,4.34392253974624,2.14280734351315,8.4070930554706,1.21393120847326,0.91064876540519,4.96733272910777,0,2.05785611324902,6.18524570089169,2.17050152757402,0.472775363535873,0.889851215136553,15.8556047558038,2.04250266890802,0.280272163313789,64.8342691561742,0.863710364874486,0,9.72081000802526,15.4853339498072,0.581207126840626,5.73732298598512,56.921506895848,20.3071840879776,35.3387247584476,51.8444746360569,32.2670519115208,0.828324005113957,0.511280428554946,12.2782244555369,17.8703357464359,3.1020638566432,2.8666168169323,0.447421727191169,0.588901401691458,0.243835849964539,1.94228651156368,2.46390736454993,3.4794432940146,13.1141968125968,2.57333409808316,6.16747403000242,3.56760272332706,2.14597555874024,5.82684738750774,3.32118255846682,4.09023037972107,12.4578949487256,1.41095188908457,38.4882865153632,1.88541237681301,11.1895826255519,6.83206720752298,12.2570160999186,5.77752189938577,6.39090642263004,10.3777199637459,0.699588091474503,2.49975514047921,1.41157948686277,0.401206833445841,47.4718652360236,17.4317127693725,5.16022499345225,13.8838974730002,1.76777874496378,7.85431242612679,24.3352346637084,2.60396512716726,1.38652688589425,0.865253124247578,1.51399709802095,3.05943601498347,3.92765353135455,0.305966489225945,0.534434810531121,0.735159196278759,0.50141507858475,8.2598781057881,4.55539021265503,12.4375415918817,4.3441858261996,13.8602088235638,22.3780565575916,0.710478008196067,2.17261500035503,0.784923038064294,1.01835453245064,3.23387502333151,8.70866991587845,15.0582652477524,6.06168477131288,6.59844289612622,36.9252995766075,2.52350132694021,0.533636729388577,19.307228228694,3.77265848847665,18.7712753922763,74.6895223957314,74.4620006317801,12.6493787095247,4.22674966541155,0 | |||
|short_description=p1@MEIS1 | |||
}} |
Latest revision as of 01:14, 18 September 2015
Short description: | p1@MEIS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MEIS1_5end |
Coexpression cluster: | C1912_uterus_cervix_rectum_cerebellum_neuroepithelioma_sacrococcigeal_neuroectodermal |
Association with transcript: | 0bp_to_ENST00000491706_5end |
EntrezGene: | MEIS1 |
HGNC: | 7000 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 7.67e-12 | 43 |
smooth muscle myoblast | 7.67e-12 | 43 |
muscle cell | 8.09e-12 | 55 |
muscle precursor cell | 1.46e-11 | 58 |
myoblast | 1.46e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.46e-11 | 58 |
electrically responsive cell | 5.53e-10 | 61 |
electrically active cell | 5.53e-10 | 61 |
vascular associated smooth muscle cell | 1.45e-07 | 32 |