FFCP PHASE1:Hg19::chr17:7750417..7750437,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:7750417..7750437,+
|short_description=p10@KDM6B
|description=CAGE_peak_10_at_KDM6B_5end
|association_with_transcript=-426bp_to_uc002gix.2_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23135 | |EntrezGene=23135 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=29012 | |HGNC=29012 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-426bp_to_uc002gix.2_5end | |||
|cluster_id=chr17:7750417..7750437,+ | |||
|coexpression_cluster_id=C532 | |||
|description=CAGE_peak_10_at_KDM6B_5end | |||
|id=chr17:7750417..7750437,+ | |||
|ontology_enrichment_celltype=CL:0002057!6.19e-23!42;CL:0000860!3.07e-21!45;CL:0000766!1.45e-13!76;CL:0000738!4.71e-13!140;CL:0002087!1.67e-12!119;CL:0000557!2.52e-12!71;CL:0002031!2.75e-12!124;CL:0000839!6.02e-12!70;CL:0002194!1.72e-11!63;CL:0000576!1.72e-11!63;CL:0000040!1.72e-11!63;CL:0000559!1.72e-11!63;CL:0002009!1.77e-11!65;CL:0000037!3.98e-10!172;CL:0000566!3.98e-10!172;CL:0002032!6.08e-10!165;CL:0000837!6.08e-10!165;CL:0000988!2.86e-09!182;CL:0000763!1.25e-08!112;CL:0000049!1.25e-08!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.52e-107;33!CL:0002057;6.52e-107;33!CL:0000473;1.37e-72;39!CL:0000234;1.37e-72;39!CL:0000576;2.56e-49;48!CL:0000766;8.22e-35;69!CL:0000775;8.06e-19;3!CL:0000763;6.22e-16;100!CL:0002087;3.52e-12;104!CL:0000738;1.47e-09;136!CL:0000094;2.34e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.14e-90,42;CL:0002057,3.14e-90,42;CL:0000473,2.53e-78,48;CL:0000234,2.53e-78,48;CL:0000766,7.26e-68,72;CL:0002194,1.20e-61,59;CL:0000576,1.20e-61,59;CL:0000040,1.20e-61,59;CL:0000559,1.20e-61,59;CL:0002009,1.70e-59,61;CL:0000839,2.00e-59,66;CL:0000557,1.78e-58,67;CL:0000763,1.21e-43,108;CL:0000049,1.21e-43,108;CL:0000738,1.37e-33,136;CL:0002031,1.48e-30,120;CL:0002087,2.11e-29,115;CL:0002032,1.53e-27,161;CL:0000837,1.53e-27,161;CL:0000037,3.62e-26,168;CL:0000988,1.47e-24,177;CL:0000775,1.03e-18,3;CL:0000134,2.31e-10,354;CL:0002320,4.79e-10,361;CL:0000219,6.21e-09,386;CL:0000048,1.44e-07,427;CL:0000723,2.22e-07,433;CL:0000094,2.55e-07,8;CL:0000034,3.89e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;7.13e-68;42!CL:0000049;8.75e-13;108!UBERON:0000358;2.84e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.42e-12!102;UBERON:0003061!9.42e-12!102;UBERON:0002193!2.46e-10!112;UBERON:0002371!5.60e-10!80;UBERON:0001474!7.59e-10!86;UBERON:0004765!4.97e-08!101;UBERON:0001434!4.97e-08!101;UBERON:0002405!1.81e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.95e-51,76;UBERON:0001474,5.78e-47,82;UBERON:0004765,2.25e-42,90;UBERON:0002405,7.46e-41,93;UBERON:0002390,1.59e-38,98;UBERON:0003061,1.59e-38,98;UBERON:0001434,1.17e-37,100;UBERON:0002193,1.67e-34,108;UBERON:0003081,1.40e-20,203;UBERON:0002204,1.64e-20,167;UBERON:0000926,2.66e-12,315;UBERON:0004120,2.66e-12,315;UBERON:0006603,2.66e-12,315;UBERON:0002384,1.29e-09,371 | |||
|phase1_expression=0,0,0.140954404095971,0,0.446961094427288,0,0,0.631719873426831,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0.305653622991805,0.0821005894499457,0.314843125254717,0.393364276848904,0,0,0,0,0.369754010166788,0.0774672005803016,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0.872389432677388,0.755751887377619,1.21292030593908,3.25400651667958,3.28934310417461,3.40677007984614,2.8769239232215,2.30544635876191,1.41889337933151,3.44745680736619,2.5819387343353,1.35426486594342,2.63539275359647,1.91034305040492,1.57306439111559,6.42776173978895,1.92557416245656,5.11469700639233,0.659702600373432,1.39624560335142,0.426224750532694,5.5139755339431,6.80862269629368,6.22822248995575,3.76872997885115,1.5644487552606,1.3031330682307,6.05399502633369,4.41933163185078,1.58231193720442,0,0,0,0.336985893439485,0.150176892841506,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0.764546456250458,0,0.560508562981536,0,0.393419540227666,0.393010762749165,0.205601498999509,0,0.32592226663359,0,0,0,0.294605907474837,0,0.270803863765016,0,0.130059347559878,0,0,0,0.14828656316206,0.535081656179426,0,0.113309342697566,0,0,0,0.318565414324097,0,0,0,0.255973222308837,0,0,0,0,0.802320587350522,0.579297615531196,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,0.130979075497713,0.364295288292542,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0.33472061276467,0.402829317109147,0,0.24406205754817,0,1.62028389576352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,1.06748995729705,0.24666754841716,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0.103052529238439,0.257640540045629,0,0,0.0974370051611986,0,0.0920498986422993,0.161646056818812,0,0.10075209822764,0,0,0,0.286804595389004,0,0.265059536642971,0.348581828608555,0.207322110030741,0,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0.100528972411631,0.185176890317059,0,0,0,0,0.117408694235822,0,0,0,0,0.858486162094873,0,0,0,0,0.16798212819886,0,0,0,0,20.6918559916296,0.088048434013226,0,0.576479813667846,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0.431255149719035,0.256686072559497,0,0,0,0,0,4.49404214368309,14.9580729602012,1.24324654030811,0,0,0,0.207970861530807,0.356857977594324,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0.431428401637234,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0.184161977871793,0,0.182091168006717,0,0,0,0,0,0.211103257785751,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0.0915694648183434,0,0.574265537996172,0.650060246036521,0,0,0,0,0,0,0.145016693914229,0,0,0.165284915360978,0.192190067365106,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0.443430153536676,0,0.507447609232169,0,0.569647187174163,0,0.411362273086194,0,0,0.79312517629427,0.106824071127473,0,0.245040215981032,0,0,0.0711418433484141,0,0.399158742865633,0,0,0,0,0,0.313359791546046,0,0.169291777801603,0.321176150207399,0,0,0,0,0,0,0.19538809540204,0,0,0,0.33307196799782,0,0,0.293016358543788,0,0,0,0,0,0.307160702099232,0.994147647766298,0,0,0,0,0.19924798825107,0.552567831062295,0.251932747854276,0,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,0,0,0.260427761085233,0.0874599999961957,0,0,0.254253650292766,0,0,0,0.347249989866585,0,0,0,0.110579259931225,0.591095237907095,0,0.10893846351899,0,0.153900517007594,0.113942055847001,0,0.359030577639089,0,0,0.0915975934018623,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0,0.216388639742091,0,0.0884575645033392,0,0.593042257361244,0,0,0.134802265961354,0,0,0,0,0,0.394584402849391,0,0.61214552326098,0.063186579628488,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0.173559738335131,0.0979923974143777,0,0,0,0,0.0730893170861856,0,0.193978032976839,0.176512253383001,0.225980740780532,0,0,0,0.195551382734803,0.240476460754601,0,0.19980960958213,0,0,0,0.288109595976299,0,0,0.135904206073614,0,0,0,0,0,0,0,0.262887354279314,0,0.458320848023367,0.717873024576814,0.399358000997982,0.429226048136571,0,0.201550417460179,0,0,0.0787831823072236,0.164831716762333,0,0.196854963029498,0,0.795229689809303,0.136203406111576,0,0,0,0.2249738915515,0,0,0,0.0788057072991982,0.209818352539992,0,0.35857467866569,0,0,0,0,0.542999601753713,0,0,0,0.082092520749339,0.170388021785422,0,0.146552233678082,0,0,0.13223260174269,0,0,0.427149650270779,0.471612915298998,0,0,0,0.121792598380896,0,0,0,0,0,0.157054096250234,0,0.366078794705889,0.1251909307065,0,0,0,0.138348634936231,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0.228840068396924,0,0.15543720058278,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0.214441591374926,0,0.226705925512272,0.2315224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| ||
|short_description=p10@KDM6B | |||
}} | }} |
Latest revision as of 01:42, 18 September 2015
Short description: | p10@KDM6B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_KDM6B_5end |
Coexpression cluster: | C532_Mast_CD14_Eosinophils_seminal_ductus_Neutrophils_Smooth |
Association with transcript: | -426bp_to_uc002gix.2_5end |
EntrezGene: | KDM6B |
HGNC: | 29012 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.14e-90 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.14e-90 | 42 |
defensive cell | 2.53e-78 | 48 |
phagocyte | 2.53e-78 | 48 |
myeloid leukocyte | 7.26e-68 | 72 |
monopoietic cell | 1.20e-61 | 59 |
monocyte | 1.20e-61 | 59 |
monoblast | 1.20e-61 | 59 |
promonocyte | 1.20e-61 | 59 |
macrophage dendritic cell progenitor | 1.70e-59 | 61 |
myeloid lineage restricted progenitor cell | 2.00e-59 | 66 |
granulocyte monocyte progenitor cell | 1.78e-58 | 67 |
myeloid cell | 1.21e-43 | 108 |
common myeloid progenitor | 1.21e-43 | 108 |
leukocyte | 1.37e-33 | 136 |
hematopoietic lineage restricted progenitor cell | 1.48e-30 | 120 |
nongranular leukocyte | 2.11e-29 | 115 |
hematopoietic oligopotent progenitor cell | 1.53e-27 | 161 |
hematopoietic multipotent progenitor cell | 1.53e-27 | 161 |
hematopoietic stem cell | 3.62e-26 | 168 |
hematopoietic cell | 1.47e-24 | 177 |
neutrophil | 1.03e-18 | 3 |
mesenchymal cell | 2.31e-10 | 354 |
connective tissue cell | 4.79e-10 | 361 |
motile cell | 6.21e-09 | 386 |
multi fate stem cell | 1.44e-07 | 427 |
somatic stem cell | 2.22e-07 | 433 |
granulocyte | 2.55e-07 | 8 |
stem cell | 3.89e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.95e-51 | 76 |
bone element | 5.78e-47 | 82 |
skeletal element | 2.25e-42 | 90 |
immune system | 7.46e-41 | 93 |
hematopoietic system | 1.59e-38 | 98 |
blood island | 1.59e-38 | 98 |
skeletal system | 1.17e-37 | 100 |
hemolymphoid system | 1.67e-34 | 108 |
lateral plate mesoderm | 1.40e-20 | 203 |
musculoskeletal system | 1.64e-20 | 167 |
mesoderm | 2.66e-12 | 315 |
mesoderm-derived structure | 2.66e-12 | 315 |
presumptive mesoderm | 2.66e-12 | 315 |
connective tissue | 1.29e-09 | 371 |