FFCP PHASE1:Hg19::chr2:171572525..171572547,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=389058 | |EntrezGene=389058 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14529 | |HGNC=14529 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-4bp_to_ENST00000487037_5end | |association_with_transcript=-4bp_to_ENST00000487037_5end | ||
|cluster_id=chr2:171572525..171572547,+ | |||
|description=CAGE_peak_6_at_SP5_5end | |description=CAGE_peak_6_at_SP5_5end | ||
|id=chr2:171572525..171572547,+ | |id=chr2:171572525..171572547,+ | ||
|ontology_enrichment_celltype=CL:0002322!2.86e-15!5 | |ontology_enrichment_celltype=CL:0002322!2.86e-15!5 | ||
|ontology_enrichment_celltype_v019=CL:0002322;5.77e-52;5!CL:0002321;2.31e-17;15!CL:0000182;1.24e-14;12!CL:0002563;2.13e-11;4!CL:0000148;4.25e-10;10!CL:0000147;2.35e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,6.10e-52,5;CL:0000182,1.27e-14,12;CL:0002563,2.13e-11,4;CL:0000148,4.81e-10,10;CL:0000541,4.81e-10,10;CL:0000223,2.68e-08,58;CL:0000147,2.57e-07,14 | |||
|ontology_enrichment_development_v019=UBERON:0004161;6.14e-16;11!UBERON:0009497;1.59e-13;13!UBERON:0001041;8.40e-09;30!UBERON:0003104;1.42e-08;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.43e-12!115;UBERON:0000473!6.74e-08!8;UBERON:0002780!2.58e-07!41;UBERON:0001890!2.58e-07!41;UBERON:0006240!2.58e-07!41;UBERON:0003080!4.40e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;1.39e-11;1!UBERON:0007029;1.39e-11;1!UBERON:0001961;1.39e-11;1!UBERON:0001744;1.39e-11;1!UBERON:0001042;1.39e-11;1!UBERON:0001735;1.39e-11;1!UBERON:0001242;2.13e-11;4!UBERON:0001262;2.13e-11;4!UBERON:0004786;2.13e-11;4!UBERON:0004808;2.13e-11;4!UBERON:0001277;2.13e-11;4!UBERON:0002107;2.57e-09;19!UBERON:0006925;2.57e-09;19!UBERON:0002423;4.09e-07;25!UBERON:0000485;6.98e-07;7!UBERON:0003929;6.98e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,1.63e-11,1;UBERON:0002372,1.81e-11,1;UBERON:0001961,1.81e-11,1;UBERON:0001744,1.81e-11,1;UBERON:0001735,1.81e-11,1;UBERON:0001242,2.13e-11,4;UBERON:0001262,2.13e-11,4;UBERON:0004786,2.13e-11,4;UBERON:0004808,2.13e-11,4;UBERON:0001277,2.13e-11,4;UBERON:0002107,2.60e-09,19;UBERON:0006925,2.60e-09,19;UBERON:0008836,2.60e-09,19;UBERON:0003929,5.78e-09,54;UBERON:0008835,4.61e-08,22;UBERON:0003894,4.61e-08,22;UBERON:0009854,1.02e-07,23;UBERON:0004921,1.84e-07,118;UBERON:0005911,2.55e-07,82;UBERON:0007499,4.12e-07,25;UBERON:0009497,4.12e-07,25;UBERON:0000015,4.12e-07,25;UBERON:0002423,4.12e-07,25;UBERON:0006235,4.12e-07,25;UBERON:0004161,4.12e-07,25;UBERON:0009856,7.66e-07,26 | |||
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| ||
|short_description=p6@SP5 | |short_description=p6@SP5 | ||
}} | }} |
Latest revision as of 03:21, 18 September 2015
Short description: | p6@SP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SP5_5end |
Coexpression cluster: | NA |
Association with transcript: | -4bp_to_ENST00000487037_5end |
EntrezGene: | SP5 |
HGNC: | 14529 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 6.10e-52 | 5 |
hepatocyte | 1.27e-14 | 12 |
intestinal epithelial cell | 2.13e-11 | 4 |
melanocyte | 4.81e-10 | 10 |
melanoblast | 4.81e-10 | 10 |
endodermal cell | 2.68e-08 | 58 |
pigment cell | 2.57e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
surface | 1.63e-11 | 1 |
tonsil | 1.81e-11 | 1 |
mucosa-associated lymphoid tissue | 1.81e-11 | 1 |
lymphoid tissue | 1.81e-11 | 1 |
tonsillar ring | 1.81e-11 | 1 |
intestinal mucosa | 2.13e-11 | 4 |
wall of intestine | 2.13e-11 | 4 |
gastrointestinal system mucosa | 2.13e-11 | 4 |
gastrointestinal system epithelium | 2.13e-11 | 4 |
intestinal epithelium | 2.13e-11 | 4 |
liver | 2.60e-09 | 19 |
digestive gland | 2.60e-09 | 19 |
liver bud | 2.60e-09 | 19 |
gut epithelium | 5.78e-09 | 54 |
hepatic diverticulum | 4.61e-08 | 22 |
liver primordium | 4.61e-08 | 22 |
digestive tract diverticulum | 1.02e-07 | 23 |
subdivision of digestive tract | 1.84e-07 | 118 |
endo-epithelium | 2.55e-07 | 82 |
epithelial sac | 4.12e-07 | 25 |
epithelium of foregut-midgut junction | 4.12e-07 | 25 |
anatomical boundary | 4.12e-07 | 25 |
hepatobiliary system | 4.12e-07 | 25 |
foregut-midgut junction | 4.12e-07 | 25 |
septum transversum | 4.12e-07 | 25 |
sac | 7.66e-07 | 26 |