FFCP PHASE1:Hg19::chr12:31632584..31632589,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=160518 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=28338 | |||
|TSSclassifier=strong | |||
|UniProt=B3KVW7 | |||
|association_with_transcript=439bp_to_AK123642_5end | |||
|cluster_id=chr12:31632584..31632589,- | |||
|coexpression_cluster_id=C311 | |||
|description=CAGE_peak_20_at_DENND5B_5end | |||
|id=chr12:31632584..31632589,- | |||
|ontology_enrichment_celltype=CL:0002590!8.96e-09!3;CL:0002178!1.04e-08!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003104;4.53e-08;31 | |||
|ontology_enrichment_disease=DOID:4960!3.28e-23!1;DOID:0070004!3.28e-23!1;DOID:3119!2.52e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:3119;1.43e-15;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,1.43e-15,14 | |||
|ontology_enrichment_uberon=UBERON:0002902!5.13e-23!1;UBERON:0009899!5.13e-23!1;UBERON:0002372!6.40e-23!1;UBERON:0001961!6.40e-23!1;UBERON:0001744!6.40e-23!1;UBERON:0001735!6.40e-23!1;UBERON:0001042!9.24e-10!10;UBERON:0009145!9.24e-10!10;UBERON:0006562!5.87e-09!11;UBERON:0001723!9.66e-09!3;UBERON:0001033!9.66e-09!3;UBERON:0010056!9.66e-09!3;UBERON:0001052!6.50e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001052;3.10e-50;4!UBERON:0004907;1.48e-40;5!UBERON:0000059;2.25e-19;11!UBERON:0000160;1.85e-12;17!UBERON:0005409;4.42e-10;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,3.10e-50,4;UBERON:0004907,1.48e-40,5;UBERON:0000059,2.25e-19,11;UBERON:0000160,1.85e-12,17;UBERON:0001046,6.95e-12,19;UBERON:0005409,4.34e-09,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.84762057278609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342233301085281,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p20@DENND5B | |||
}} |
Latest revision as of 03:28, 18 September 2015
Short description: | p20@DENND5B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_DENND5B_5end |
Coexpression cluster: | C311_rectal_heart_choriocarcinoma_placenta_chorionic_lung_ductal |
Association with transcript: | 439bp_to_AK123642_5end |
EntrezGene: | DENND5B |
HGNC: | 28338 |
UniProt: | B3KVW7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
rectum | 3.10e-50 | 4 |
lower digestive tract | 1.48e-40 | 5 |
large intestine | 2.25e-19 | 11 |
intestine | 1.85e-12 | 17 |
hindgut | 6.95e-12 | 19 |
gastrointestinal system | 4.34e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 1.43e-15 | 14 |