FFCP PHASE1:Hg19::chr7:29186234..29186261,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1124 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1944 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000470261_5end | |||
|cluster_id=chr7:29186234..29186261,+ | |||
|description=CAGE_peak_8_at_CHN2_5end | |||
|id=chr7:29186234..29186261,+ | |||
|ontology_enrichment_celltype=CL:0002009!4.93e-39!65;CL:0002194!3.42e-37!63;CL:0000576!3.42e-37!63;CL:0000040!3.42e-37!63;CL:0000559!3.42e-37!63;CL:0000557!2.45e-34!71;CL:0000839!9.96e-32!70;CL:0000860!1.25e-31!45;CL:0000766!1.52e-31!76;CL:0002057!1.74e-31!42;CL:0002087!6.44e-23!119;CL:0000763!1.18e-21!112;CL:0000049!1.18e-21!112;CL:0000738!2.86e-21!140;CL:0002031!8.41e-20!124;CL:0000037!3.74e-16!172;CL:0000566!3.74e-16!172;CL:0002032!3.19e-15!165;CL:0000837!3.19e-15!165;CL:0000988!5.35e-14!182;CL:0002393!4.92e-09!9;CL:0002397!4.92e-09!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.35e-39;33!CL:0002057;4.35e-39;33!CL:0000473;5.59e-39;39!CL:0000234;5.59e-39;39!CL:0000576;1.02e-37;48!CL:0000766;1.37e-27;69!CL:0002393;2.11e-12;6!CL:0002397;2.11e-12;6!CL:0000763;1.10e-11;100!CL:0000235;1.17e-10;6!CL:0000738;2.99e-09;136!CL:0002087;3.98e-09;104!CL:0000840;1.60e-08;5!CL:0002619;3.32e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,3.12e-73,61;CL:0002194,1.83e-69,59;CL:0000576,1.83e-69,59;CL:0000040,1.83e-69,59;CL:0000559,1.83e-69,59;CL:0000473,7.60e-68,48;CL:0000234,7.60e-68,48;CL:0000557,3.31e-65,67;CL:0000766,1.12e-61,72;CL:0000839,2.01e-60,66;CL:0000860,2.73e-58,42;CL:0002057,2.73e-58,42;CL:0000763,3.86e-44,108;CL:0000049,3.86e-44,108;CL:0002087,2.96e-35,115;CL:0000738,2.17e-34,136;CL:0002031,1.03e-31,120;CL:0000037,1.35e-27,168;CL:0002032,8.01e-26,161;CL:0000837,8.01e-26,161;CL:0000988,3.01e-25,177;CL:0002393,7.76e-17,9;CL:0002397,7.76e-17,9;CL:0000235,1.19e-10,6;CL:0000840,1.56e-08,5;CL:0001029,1.56e-08,5;CL:0002619,3.16e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;5.08e-40;42!CL:0000049;7.60e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.09e-33!102;UBERON:0003061!3.09e-33!102;UBERON:0002193!3.88e-28!112;UBERON:0001474!9.05e-28!86;UBERON:0002371!2.18e-27!80;UBERON:0007023!6.93e-24!115;UBERON:0004765!3.14e-21!101;UBERON:0001434!3.14e-21!101;UBERON:0002405!2.78e-20!115;UBERON:0000062!2.40e-07!511;UBERON:0003081!4.81e-07!216;UBERON:0000922!9.08e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.14e-10;15!UBERON:0000179;5.14e-10;15!UBERON:0000463;5.14e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.14e-64,98;UBERON:0003061,5.14e-64,98;UBERON:0002193,2.94e-56,108;UBERON:0002371,1.57e-55,76;UBERON:0001474,1.66e-52,82;UBERON:0004765,2.41e-46,90;UBERON:0002405,3.68e-46,93;UBERON:0001434,4.94e-40,100;UBERON:0003081,4.76e-27,203;UBERON:0002204,1.67e-17,167;UBERON:0000926,1.74e-13,315;UBERON:0004120,1.74e-13,315;UBERON:0006603,1.74e-13,315;UBERON:0000178,2.93e-10,15;UBERON:0000179,2.93e-10,15;UBERON:0000463,2.93e-10,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57345710739562,3.83829398097213,3.2511385896376,0,0,0,0,0,0,10.5259127621057,6.21687787157439,7.16135873362311,11.6436046604761,9.39291631455041,7.98484259665978,2.61716829803216,1.88937971844405,2.91100873425379,1.62700325833979,1.23350366406548,2.78735733805593,2.8769239232215,3.33008918487831,3.07426898855161,3.44745680736619,4.51839278508678,4.06279459783025,2.63539275359647,2.45615535052061,1.34834090667051,1.53041946185451,3.85114832491312,1.91801137739712,0.989553900560148,4.58766412529753,2.55734850319616,0.870627715885752,1.70215567407342,1.24564449799115,3.01498398308092,5.73631210262222,4.99534342821768,0,1.84138817993782,3.16462387440884,6.97142444829408,3.18906449947565,11.3215668574523,12.3561494261145,5.40636814229423,14.9474795628285,1.71007646244749,2.18808344918999,6.57590953552682,0,0,0,0.853460445133014,0,0.574752439954483,0,0.954053754535364,0,0,0,0,0,0.263384084775077,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.752875595388864,1.02389288923535,1.24930726552346,0.710331756132051,0.821127996921047,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0.523916301990851,0,0,4.21911611751088,3.83085422058388,4.65352861816028,0.953962497221368,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487894824518382,0,0.232387885739037,0.414644220061482,0.504641701751257,0.72995471815166,0,0,0,0,0,0,0,0,0.220587945464788,0.217879444092406,0,0,0.392442930250692,0,0,0,0,0,0,0.982827216677626,0,0,1.96781501668982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.3411142556707,2.34004265139238,1.78357394746474,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,7.5338563714819,2.10833939483032,0,0,0,0,0.205476322550383,0,0,0.394061520403854,0.215627574859517,0.641715181398742,0.508189248444927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.40980880980951,5.60856922128404,1.70764092485511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0877350463246,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13345112812495,0.27470839445503,0.660075999364704,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0.658589785919804,0,0,0,0,0,1.12972560932135,0,0,0,0,2.53723804616085,0.764637207142375,1.13929437434833,2.85878130549347,4.93634727703433,1.94541993357815,1.62009431171434,3.96562588147135,0,0,0,0.371606350251437,0,0.995985806877798,0.637705090915289,0,0,0,0,2.24637742490767,0,0,0,0,0,0,0.425846237690326,0,0.921722292925374,0,0,0.586164286206121,0,1.23087398947712,1.08182271390393,0,0,0,1.02555725490326,0,0,0,0,0,0,0.994147647766298,0.422008249231538,0,0,0,0.796991953004279,0.276283915531148,1.0077309914171,0,0.615424027305347,0,0,0,0,0.394573622547734,0,0,0,0.185536196323703,0,0,0,0.724999575434793,0,0,0.472775363535873,1.03423011972439,0,0.173624994933292,0.885741385813839,1.80894657938112,0,0.110579259931225,0,0,0,0.139423744278603,0.384751292518985,0.341826167541004,2.76676685265672,1.97466817701499,2.28159481036217,0,0.0915975934018623,1.06606955203727,0,0,0.997270091400938,0,0,0,0,0.317873157960757,0.210998064528027,0.489698424477443,0.282706142867882,0.432777279484182,0.995261931078505,0.176915129006678,1.22206028986725,0.296521128680622,0,0,0.808813595768125,0,0.702793337176017,0.182454789215666,1.17398771359254,0,1.18375320854817,0,0.30607276163049,0.821425535170343,0.901940516486955,0.414752765588989,0,0,0,0,0.569219092059585,0,0.347119476670262,0,0.609414446062818,2.09672001890436,0,0.19351266257817,0.292357268344742,0.410577285266046,0.484945082442097,0,0.451961481561065,0,0,0.253243183823515,0.977756913674015,0,0.426905989478705,1.39866726707491,0,0,0.514784993585894,0,3.47907099583211,0.235694034616795,0.135904206073614,0,0,0.577901179803038,0.600420288709789,0.136905378891993,0,0,0,1.11712960508902,3.43740636017525,0,1.19807400299395,3.004582336956,0.89268582976749,9.00258531322132,0,0,0.551482276150566,0.494495150286999,0.808842526250219,1.18112977817699,0,0.795229689809303,0.136203406111576,0.160753148465019,0,0,7.42413842119952,9.2856234546954,0.668245123238271,0,0.945668487590378,0.996637174564964,0.105600336519406,0.179287339332845,0,1.42939065274673,0.662091970365432,0,0,0,0,0,0.082092520749339,0,0,0,1.32506888912221,0.517131825446202,0.39669780522807,0,0,0.747511887973863,0.157204305099666,0.414239055347196,0,0,0.487170393523584,0.638341257770182,0,0,0,0,0,0,0.366078794705889,0.1251909307065,0.573409195690071,0.887432412294818,0.745156835296601,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.877136198314828,0.176689145945881,0,0,0,0,3.03859956177382,0.138258436151731,0,0.132864840313363,0,0.327609848846413,0.245772908753719,0,0,1.49368421571797,0,0,0,0,0,0,0.107824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| |||
|short_description=p8@CHN2 | |||
}} |
Latest revision as of 03:52, 18 September 2015
Short description: | p8@CHN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CHN2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000470261_5end |
EntrezGene: | CHN2 |
HGNC: | 1944 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 3.12e-73 | 61 |
monopoietic cell | 1.83e-69 | 59 |
monocyte | 1.83e-69 | 59 |
monoblast | 1.83e-69 | 59 |
promonocyte | 1.83e-69 | 59 |
defensive cell | 7.60e-68 | 48 |
phagocyte | 7.60e-68 | 48 |
granulocyte monocyte progenitor cell | 3.31e-65 | 67 |
myeloid leukocyte | 1.12e-61 | 72 |
myeloid lineage restricted progenitor cell | 2.01e-60 | 66 |
classical monocyte | 2.73e-58 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.73e-58 | 42 |
myeloid cell | 3.86e-44 | 108 |
common myeloid progenitor | 3.86e-44 | 108 |
nongranular leukocyte | 2.96e-35 | 115 |
leukocyte | 2.17e-34 | 136 |
hematopoietic lineage restricted progenitor cell | 1.03e-31 | 120 |
hematopoietic stem cell | 1.35e-27 | 168 |
hematopoietic oligopotent progenitor cell | 8.01e-26 | 161 |
hematopoietic multipotent progenitor cell | 8.01e-26 | 161 |
hematopoietic cell | 3.01e-25 | 177 |
intermediate monocyte | 7.76e-17 | 9 |
CD14-positive, CD16-positive monocyte | 7.76e-17 | 9 |
macrophage | 1.19e-10 | 6 |
immature conventional dendritic cell | 1.56e-08 | 5 |
common dendritic progenitor | 1.56e-08 | 5 |
adult endothelial progenitor cell | 3.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.14e-64 | 98 |
blood island | 5.14e-64 | 98 |
hemolymphoid system | 2.94e-56 | 108 |
bone marrow | 1.57e-55 | 76 |
bone element | 1.66e-52 | 82 |
skeletal element | 2.41e-46 | 90 |
immune system | 3.68e-46 | 93 |
skeletal system | 4.94e-40 | 100 |
lateral plate mesoderm | 4.76e-27 | 203 |
musculoskeletal system | 1.67e-17 | 167 |
mesoderm | 1.74e-13 | 315 |
mesoderm-derived structure | 1.74e-13 | 315 |
presumptive mesoderm | 1.74e-13 | 315 |
blood | 2.93e-10 | 15 |
haemolymphatic fluid | 2.93e-10 | 15 |
organism substance | 2.93e-10 | 15 |