FFCP PHASE1:Hg19::chr15:55581954..55582018,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:55581954..55582018,-
|short_description=p1@RAB27A
|description=CAGE_peak_1_at_RAB27A_5end
|association_with_transcript=0bp_to_ENST00000336787,NM_183235,uc...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5873 | |EntrezGene=5873 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9766 | |HGNC=9766 | ||
|TSSclassifier=strong | |||
|UniProt=P51159,A2RU94 | |UniProt=P51159,A2RU94 | ||
|association_with_transcript=0bp_to_ENST00000336787,NM_183235,uc002acr.2_5end | |||
|cluster_id=chr15:55581954..55582018,- | |||
|coexpression_cluster_id=C344 | |||
|description=CAGE_peak_1_at_RAB27A_5end | |||
|id=chr15:55581954..55582018,- | |||
|ontology_enrichment_celltype=CL:0002032!2.00e-41!165;CL:0000837!2.00e-41!165;CL:0000037!8.07e-41!172;CL:0000566!8.07e-41!172;CL:0000988!3.07e-37!182;CL:0000738!1.49e-36!140;CL:0002087!8.67e-36!119;CL:0002031!5.60e-34!124;CL:0000763!1.29e-27!112;CL:0000049!1.29e-27!112;CL:0000766!1.59e-25!76;CL:0000860!1.70e-23!45;CL:0002057!2.68e-23!42;CL:0002009!1.07e-22!65;CL:0002194!3.56e-22!63;CL:0000576!3.56e-22!63;CL:0000040!3.56e-22!63;CL:0000559!3.56e-22!63;CL:0000557!4.49e-22!71;CL:0000839!1.36e-20!70;CL:0000134!6.69e-20!358;CL:0002320!2.72e-18!365;CL:0000048!3.19e-15!430;CL:0000723!2.73e-14!436;CL:0000219!7.82e-14!390;CL:0000034!3.46e-13!444;CL:0000838!1.62e-12!52;CL:0000542!3.11e-12!53;CL:0000051!3.11e-12!53;CL:0000084!3.16e-10!25;CL:0000827!3.16e-10!25;CL:0000791!7.12e-09!18;CL:0000789!7.12e-09!18;CL:0002420!7.12e-09!18;CL:0002419!7.12e-09!18;CL:0000790!7.12e-09!18;CL:0000625!5.01e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.67e-18;33!CL:0002057;2.67e-18;33!CL:0000576;5.77e-16;48!CL:0000473;1.03e-15;39!CL:0000234;1.03e-15;39!CL:0000766;9.75e-13;69!CL:0002087;2.74e-11;104!CL:0000084;3.05e-10;25!CL:0000763;7.57e-10;100!CL:0000791;6.76e-09;18!CL:0000789;6.76e-09;18!CL:0002419;6.76e-09;18!CL:0000738;1.80e-08;136!CL:0000988;7.94e-08;177!CL:0000625;4.98e-07;11!CL:0000542;6.42e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0002032,7.27e-41,161;CL:0000837,7.27e-41,161;CL:0000037,2.73e-40,168;CL:0000988,2.59e-37,177;CL:0000738,3.93e-36,136;CL:0002087,2.15e-35,115;CL:0002031,1.51e-33,120;CL:0000763,4.50e-27,108;CL:0000049,4.50e-27,108;CL:0000766,3.64e-25,72;CL:0000473,2.58e-23,48;CL:0000234,2.58e-23,48;CL:0000860,2.62e-23,42;CL:0002057,2.62e-23,42;CL:0002009,2.25e-22,61;CL:0002194,7.33e-22,59;CL:0000576,7.33e-22,59;CL:0000040,7.33e-22,59;CL:0000559,7.33e-22,59;CL:0000557,1.08e-21,67;CL:0000839,3.43e-20,66;CL:0000134,1.14e-19,354;CL:0002320,4.22e-18,361;CL:0000048,4.56e-15,427;CL:0000723,3.88e-14,433;CL:0000219,1.41e-13,386;CL:0000034,5.42e-13,441;CL:0000838,1.33e-12,52;CL:0000542,2.56e-12,53;CL:0000051,2.56e-12,53;CL:0000084,3.13e-10,25;CL:0000827,3.13e-10,25;CL:0000791,7.06e-09,18;CL:0000789,7.06e-09,18;CL:0002420,7.06e-09,18;CL:0002419,7.06e-09,18;CL:0000790,7.06e-09,18;CL:0000625,4.98e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;4.03e-17;42!CL:0000790;6.76e-09;18!CL:0000049;1.25e-08;108!CL:0000051;6.42e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.81e-28!102;UBERON:0003061!1.81e-28!102;UBERON:0002193!2.77e-28!112;UBERON:0002405!2.31e-20!115;UBERON:0002371!3.26e-20!80;UBERON:0001474!4.05e-17!86;UBERON:0002384!5.02e-17!375;UBERON:0004765!4.50e-15!101;UBERON:0001434!4.50e-15!101;UBERON:0003081!5.75e-10!216;UBERON:0000178!1.99e-08!15;UBERON:0000179!1.99e-08!15;UBERON:0000463!1.99e-08!15;UBERON:0002204!3.50e-08!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.82e-08;15!UBERON:0000179;1.82e-08;15!UBERON:0000463;1.82e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.84e-28,98;UBERON:0003061,4.84e-28,98;UBERON:0002193,7.38e-28,108;UBERON:0002405,6.95e-21,93;UBERON:0002371,8.47e-20,76;UBERON:0002384,6.86e-17,371;UBERON:0001474,1.24e-16,82;UBERON:0004765,5.57e-15,90;UBERON:0001434,1.31e-13,100;UBERON:0003081,3.71e-11,203;UBERON:0000178,1.97e-08,15;UBERON:0000179,1.97e-08,15;UBERON:0000463,1.97e-08,15;UBERON:0002204,2.32e-07,167 | |||
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| ||
|short_description=p1@RAB27A | |||
}} | }} |
Latest revision as of 04:07, 18 September 2015
Short description: | p1@RAB27A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RAB27A_5end |
Coexpression cluster: | C344_Neutrophils_CD14_Eosinophils_Whole_blood_CD14CD16_gall |
Association with transcript: | 0bp_to_ENST00000336787, NM_183235, uc002acr.2_5end |
EntrezGene: | RAB27A |
HGNC: | 9766 |
UniProt: | P51159A2RU94 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.84e-28 | 98 |
blood island | 4.84e-28 | 98 |
hemolymphoid system | 7.38e-28 | 108 |
immune system | 6.95e-21 | 93 |
bone marrow | 8.47e-20 | 76 |
connective tissue | 6.86e-17 | 371 |
bone element | 1.24e-16 | 82 |
skeletal element | 5.57e-15 | 90 |
skeletal system | 1.31e-13 | 100 |
lateral plate mesoderm | 3.71e-11 | 203 |
blood | 1.97e-08 | 15 |
haemolymphatic fluid | 1.97e-08 | 15 |
organism substance | 1.97e-08 | 15 |
musculoskeletal system | 2.32e-07 | 167 |