FFCP PHASE1:Hg19::chr2:172378603..172378632,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:172378603..172378632,+
|short_description=p5@CYBRD1
|description=CAGE_peak_5_at_CYBRD1_5end
|association_with_transcript=-124bp_to_ENST00000409484_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79901 | |EntrezGene=79901 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20797 | |HGNC=20797 | ||
|TSSclassifier=strong | |||
|UniProt=B4DWD7 | |UniProt=B4DWD7 | ||
|association_with_transcript=-124bp_to_ENST00000409484_5end | |||
|cluster_id=chr2:172378603..172378632,+ | |||
|description=CAGE_peak_5_at_CYBRD1_5end | |||
|id=chr2:172378603..172378632,+ | |||
|ontology_enrichment_celltype=CL:0000990!6.93e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0000453;5.76e-24;5!CL:0000159;1.07e-15;2!CL:0000990;2.09e-13;8!CL:0000451;5.39e-11;10!CL:0000313;5.58e-09;1!CL:0000037;7.83e-09;1!CL:0001024;7.83e-09;1!CL:0000319;1.97e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,4.73e-24,5;CL:0000159,1.35e-15,2;CL:0000990,1.88e-13,8;CL:0000451,4.94e-11,10;CL:0000313,5.59e-09,1;CL:0001024,7.56e-09,1;CL:0000319,2.46e-08,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1240;4.82e-09;39!DOID:2152;5.58e-09;1!DOID:3030;1.97e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,7.64e-11,39;DOID:2152,5.59e-09,1;DOID:3030,2.46e-08,1;DOID:2531,4.99e-08,51;DOID:0060083,4.99e-08,51 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;5.58e-09;1!UBERON:0002346;5.04e-08;4!UBERON:0000923;5.04e-08;4!UBERON:0010316;5.04e-08;4!UBERON:0005291;5.04e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,5.59e-09,1 | |||
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| ||
|short_description=p5@CYBRD1 | |||
}} | }} |
Latest revision as of 04:17, 18 September 2015
Short description: | p5@CYBRD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CYBRD1_5end |
Coexpression cluster: | NA |
Association with transcript: | -124bp_to_ENST00000409484_5end |
EntrezGene: | CYBRD1 |
HGNC: | 20797 |
UniProt: | B4DWD7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 4.73e-24 | 5 |
seromucus secreting cell | 1.35e-15 | 2 |
conventional dendritic cell | 1.88e-13 | 8 |
dendritic cell | 4.94e-11 | 10 |
serous secreting cell | 5.59e-09 | 1 |
CD34-positive, CD38-negative hematopoietic stem cell | 7.56e-09 | 1 |
mucus secreting cell | 2.46e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 5.59e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
leukemia | 7.64e-11 | 39 |
ovary epithelial cancer | 5.59e-09 | 1 |
mucinous adenocarcinoma | 2.46e-08 | 1 |
hematologic cancer | 4.99e-08 | 51 |
immune system cancer | 4.99e-08 | 51 |