FFCP PHASE1:Hg19::chr2:172378976..172378999,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:172378976..172378999,+ to FFCP PHASE1:Hg19::chr2:172378976..172378999,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79901 | |EntrezGene=79901 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20797 | |HGNC=20797 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000375252_5end | |||
|cluster_id=chr2:172378976..172378999,+ | |||
|description=CAGE_peak_1_at_CYBRD1_5end | |||
|id=chr2:172378976..172378999,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.06e-17!180;CL:0000057!3.39e-12!75;CL:0000136!2.49e-10!15;CL:0000680!9.96e-08!57;CL:0000056!9.96e-08!57;CL:0000355!9.96e-08!57;CL:0000187!4.64e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0000136;2.49e-09;13!CL:0000134;4.27e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.23e-12,76;CL:0000136,2.44e-10,15;CL:0000680,4.52e-08,58;CL:0000056,4.52e-08,58;CL:0000355,4.52e-08,58;CL:0000187,2.14e-07,55;CL:0000192,7.09e-07,43;CL:0000514,7.09e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.67e-12!115;UBERON:0000914!3.11e-10!83;UBERON:0002329!3.11e-10!83;UBERON:0003077!3.11e-10!83;UBERON:0003059!3.11e-10!83;UBERON:0007282!3.11e-10!83;UBERON:0009618!3.11e-10!83;UBERON:0007285!3.11e-10!83;UBERON:0000468!8.29e-10!659;UBERON:0000475!2.67e-09!365;UBERON:0002385!3.99e-09!63;UBERON:0001015!3.99e-09!63;UBERON:0000383!3.99e-09!63;UBERON:0004290!1.24e-08!70;UBERON:0001134!2.63e-08!61;UBERON:0002036!2.63e-08!61;UBERON:0003082!2.63e-08!61;UBERON:0003102!4.90e-08!95;UBERON:0000486!2.96e-07!82;UBERON:0000467!4.44e-07!625;UBERON:0000480!6.00e-07!626;UBERON:0000479!6.13e-07!787;UBERON:0000062!8.49e-07!511 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.59e-12,114;UBERON:0007524,1.61e-09,73;UBERON:0002385,1.75e-09,64;UBERON:0001015,1.75e-09,64;UBERON:0000383,1.75e-09,64;UBERON:0003077,4.47e-09,72;UBERON:0007285,4.47e-09,72;UBERON:0002329,5.67e-09,71;UBERON:0003059,5.67e-09,71;UBERON:0007282,5.67e-09,71;UBERON:0004290,5.67e-09,71;UBERON:0009618,5.67e-09,71;UBERON:0001134,1.18e-08,62;UBERON:0002036,1.18e-08,62;UBERON:0003082,1.18e-08,62;UBERON:0003102,2.69e-08,99;UBERON:0000479,7.75e-08,773;UBERON:0000486,1.48e-07,83;UBERON:0000926,5.81e-07,315;UBERON:0004120,5.81e-07,315;UBERON:0006603,5.81e-07,315 | |||
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| ||
|short_description=p1@CYBRD1 | |||
}} | }} |
Latest revision as of 04:19, 18 September 2015
Short description: | p1@CYBRD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CYBRD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000375252_5end |
EntrezGene: | CYBRD1 |
HGNC: | 20797 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.23e-12 | 76 |
fat cell | 2.44e-10 | 15 |
muscle precursor cell | 4.52e-08 | 58 |
myoblast | 4.52e-08 | 58 |
multi-potent skeletal muscle stem cell | 4.52e-08 | 58 |
muscle cell | 2.14e-07 | 55 |
smooth muscle cell | 7.09e-07 | 43 |
smooth muscle myoblast | 7.09e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.59e-12 | 114 |
dense mesenchyme tissue | 1.61e-09 | 73 |
muscle tissue | 1.75e-09 | 64 |
musculature | 1.75e-09 | 64 |
musculature of body | 1.75e-09 | 64 |
paraxial mesoderm | 4.47e-09 | 72 |
presumptive paraxial mesoderm | 4.47e-09 | 72 |
somite | 5.67e-09 | 71 |
presomitic mesoderm | 5.67e-09 | 71 |
presumptive segmental plate | 5.67e-09 | 71 |
dermomyotome | 5.67e-09 | 71 |
trunk paraxial mesoderm | 5.67e-09 | 71 |
skeletal muscle tissue | 1.18e-08 | 62 |
striated muscle tissue | 1.18e-08 | 62 |
myotome | 1.18e-08 | 62 |
surface structure | 2.69e-08 | 99 |
tissue | 7.75e-08 | 773 |
multilaminar epithelium | 1.48e-07 | 83 |
mesoderm | 5.81e-07 | 315 |
mesoderm-derived structure | 5.81e-07 | 315 |
presumptive mesoderm | 5.81e-07 | 315 |