FFCP PHASE1:Hg19::chr6:32908792..32908830,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3109 | |EntrezGene=3109 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4935 | |HGNC=4935 | ||
|TSSclassifier=strong | |||
|UniProt=A2AAT3,Q59F83,P28068 | |UniProt=A2AAT3,Q59F83,P28068 | ||
|association_with_transcript=0bp_to_ENST00000446948,uc003ocj.1,uc003ocl.1,uc011dql.1_5end | |association_with_transcript=0bp_to_ENST00000446948,uc003ocj.1,uc003ocl.1,uc011dql.1_5end | ||
|cluster_id=chr6:32908792..32908830,- | |||
|coexpression_cluster_id=C691 | |||
|description=CAGE_peak_1_at_HLA-DMB_5end | |description=CAGE_peak_1_at_HLA-DMB_5end | ||
|id=chr6:32908792..32908830,- | |id=chr6:32908792..32908830,- | ||
|ontology_enrichment_celltype=CL:0000738!1.10e-51!140;CL:0002087!2.80e-49!119;CL:0002031!7.14e-44!124;CL:0000037!4.96e-42!172;CL:0000566!4.96e-42!172;CL:0000988!3.32e-40!182;CL:0002032!2.86e-39!165;CL:0000837!2.86e-39!165;CL:0002009!1.20e-29!65;CL:0002194!3.12e-28!63;CL:0000576!3.12e-28!63;CL:0000040!3.12e-28!63;CL:0000559!3.12e-28!63;CL:0000557!4.18e-27!71;CL:0002057!9.83e-27!42;CL:0000766!3.47e-26!76;CL:0000860!1.28e-23!45;CL:0000839!1.46e-23!70;CL:0000763!3.38e-20!112;CL:0000049!3.38e-20!112;CL:0000542!2.70e-18!53;CL:0000051!2.70e-18!53;CL:0000838!7.38e-18!52;CL:0000945!9.39e-14!24;CL:0000826!9.39e-14!24;CL:0000236!2.17e-10!14;CL:0000451!1.27e-08!10;CL:0000990!2.07e-07!8 | |ontology_enrichment_celltype=CL:0000738!1.10e-51!140;CL:0002087!2.80e-49!119;CL:0002031!7.14e-44!124;CL:0000037!4.96e-42!172;CL:0000566!4.96e-42!172;CL:0000988!3.32e-40!182;CL:0002032!2.86e-39!165;CL:0000837!2.86e-39!165;CL:0002009!1.20e-29!65;CL:0002194!3.12e-28!63;CL:0000576!3.12e-28!63;CL:0000040!3.12e-28!63;CL:0000559!3.12e-28!63;CL:0000557!4.18e-27!71;CL:0002057!9.83e-27!42;CL:0000766!3.47e-26!76;CL:0000860!1.28e-23!45;CL:0000839!1.46e-23!70;CL:0000763!3.38e-20!112;CL:0000049!3.38e-20!112;CL:0000542!2.70e-18!53;CL:0000051!2.70e-18!53;CL:0000838!7.38e-18!52;CL:0000945!9.39e-14!24;CL:0000826!9.39e-14!24;CL:0000236!2.17e-10!14;CL:0000451!1.27e-08!10;CL:0000990!2.07e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.05e-22;39!CL:0000234;1.05e-22;39!CL:0000860;3.01e-22;33!CL:0002057;3.01e-22;33!CL:0000576;2.55e-19;48!CL:0002087;5.57e-16;104!CL:0000945;1.40e-15;24!CL:0000766;1.88e-13;69!CL:0000738;2.04e-13;136!CL:0000542;9.24e-13;53!CL:0000236;3.67e-11;13!CL:0000451;1.17e-09;10!CL:0000990;2.83e-08;8!CL:0000988;6.64e-08;177!CL:0000763;9.76e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,9.84e-60,136;CL:0002087,5.27e-58,115;CL:0002031,9.17e-51,120;CL:0000037,6.13e-48,168;CL:0000988,3.09e-46,177;CL:0002032,1.28e-44,161;CL:0000837,1.28e-44,161;CL:0002009,7.16e-37,61;CL:0000473,2.32e-35,48;CL:0000234,2.32e-35,48;CL:0002194,3.31e-35,59;CL:0000576,3.31e-35,59;CL:0000040,3.31e-35,59;CL:0000559,3.31e-35,59;CL:0000557,2.51e-32,67;CL:0000766,2.73e-31,72;CL:0000860,2.05e-30,42;CL:0002057,2.05e-30,42;CL:0000839,1.97e-28,66;CL:0000763,2.05e-23,108;CL:0000049,2.05e-23,108;CL:0000542,7.09e-20,53;CL:0000051,7.09e-20,53;CL:0000838,2.23e-19,52;CL:0000945,1.58e-15,24;CL:0000826,1.58e-15,24;CL:0000236,1.12e-11,14;CL:0000451,1.18e-09,10;CL:0000990,2.89e-08,8;CL:0002393,2.17e-07,9;CL:0002397,2.17e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;5.59e-22;42!CL:0000051;9.24e-13;53!CL:0000049;3.38e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.40e-34!102;UBERON:0003061!2.40e-34!102;UBERON:0002193!1.91e-32!112;UBERON:0007023!1.28e-25!115;UBERON:0002371!2.74e-24!80;UBERON:0001474!3.28e-21!86;UBERON:0002405!5.20e-19!115;UBERON:0004765!9.43e-15!101;UBERON:0001434!9.43e-15!101;UBERON:0001049!1.20e-08!57;UBERON:0005068!1.20e-08!57;UBERON:0006241!1.20e-08!57;UBERON:0007135!1.20e-08!57;UBERON:0000178!2.51e-08!15;UBERON:0000179!2.51e-08!15;UBERON:0000463!2.51e-08!15;UBERON:0003081!8.01e-07!216 | |ontology_enrichment_uberon=UBERON:0002390!2.40e-34!102;UBERON:0003061!2.40e-34!102;UBERON:0002193!1.91e-32!112;UBERON:0007023!1.28e-25!115;UBERON:0002371!2.74e-24!80;UBERON:0001474!3.28e-21!86;UBERON:0002405!5.20e-19!115;UBERON:0004765!9.43e-15!101;UBERON:0001434!9.43e-15!101;UBERON:0001049!1.20e-08!57;UBERON:0005068!1.20e-08!57;UBERON:0006241!1.20e-08!57;UBERON:0007135!1.20e-08!57;UBERON:0000178!2.51e-08!15;UBERON:0000179!2.51e-08!15;UBERON:0000463!2.51e-08!15;UBERON:0003081!8.01e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.62e-09;15!UBERON:0000179;2.62e-09;15!UBERON:0000463;2.62e-09;15!UBERON:0007023;8.15e-08;114!UBERON:0002390;3.37e-07;32 | |||
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| ||
|short_description=p1@HLA-DMB | |short_description=p1@HLA-DMB | ||
}} | }} |
Latest revision as of 04:30, 18 September 2015
Short description: | p1@HLA-DMB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HLA-DMB_5end |
Coexpression cluster: | C691_Monocytederived_CD14_Macrophage_CD19_Dendritic_immature_Whole |
Association with transcript: | 0bp_to_ENST00000446948, uc003ocj.1, uc003ocl.1, uc011dql.1_5end |
EntrezGene: | HLA-DMB |
HGNC: | 4935 |
UniProt: | A2AAT3Q59F83P28068 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.93e-40 | 98 |
blood island | 1.93e-40 | 98 |
hemolymphoid system | 1.87e-35 | 108 |
bone marrow | 8.51e-29 | 76 |
adult organism | 1.68e-28 | 114 |
immune system | 3.01e-27 | 93 |
bone element | 1.69e-24 | 82 |
skeletal element | 8.79e-20 | 90 |
skeletal system | 3.71e-16 | 100 |
lateral plate mesoderm | 1.11e-09 | 203 |
blood | 2.58e-09 | 15 |
haemolymphatic fluid | 2.58e-09 | 15 |
organism substance | 2.58e-09 | 15 |
neural tube | 2.21e-07 | 56 |
neural rod | 2.21e-07 | 56 |
future spinal cord | 2.21e-07 | 56 |
neural keel | 2.21e-07 | 56 |