FFCP PHASE1:Hg19::chr12:32552770..32552839,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=121512 | |EntrezGene=121512 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19125 | |HGNC=19125 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000550091_5end | |association_with_transcript=0bp_to_ENST00000550091_5end | ||
|cluster_id=chr12:32552770..32552839,+ | |||
|coexpression_cluster_id=C128 | |||
|description=CAGE_peak_4_at_FGD4_5end | |description=CAGE_peak_4_at_FGD4_5end | ||
|id=chr12:32552770..32552839,+ | |id=chr12:32552770..32552839,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.11e-52!254;CL:0000223!2.62e-15!59;CL:0002076!2.64e-14!43;CL:0000076!4.63e-10!62;CL:0002251!2.17e-07!21 | |ontology_enrichment_celltype=CL:0000066!1.11e-52!254;CL:0000223!2.62e-15!59;CL:0002076!2.64e-14!43;CL:0000076!4.63e-10!62;CL:0002251!2.17e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:0002076;1.23e-13;42!CL:0002251;7.38e-09;20!CL:1000497;1.07e-08;17!CL:0002518;1.07e-08;17!CL:0002368;1.16e-07;13!CL:0000039;1.48e-07;7!CL:0000586;1.48e-07;7!CL:1000449;1.51e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.30e-49,253;CL:0002076,3.35e-17,42;CL:0000223,2.07e-16,58;CL:0002251,7.12e-09,20;CL:1000497,1.80e-08,17;CL:0002518,1.80e-08,17;CL:0000076,7.34e-08,63;CL:0002368,1.02e-07,13;CL:0000039,1.48e-07,7;CL:0000586,1.48e-07,7;CL:1000449,2.47e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000223;1.79e-08;58 | |||
|ontology_enrichment_disease=DOID:305!4.47e-29!106;DOID:0050687!1.58e-21!143;DOID:162!3.57e-12!235;DOID:14566!6.26e-11!239;DOID:299!9.82e-11!25;DOID:1749!4.14e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.84e-11;14!DOID:299;2.20e-10;25!DOID:305;5.74e-10;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.25e-30,106;DOID:0050687,1.43e-22,143;DOID:1749,2.36e-11,14;DOID:162,1.29e-10,235;DOID:299,1.88e-10,25;DOID:14566,8.55e-10,239 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.38e-16!169;UBERON:0000925!2.38e-16!169;UBERON:0006595!2.38e-16!169;UBERON:0001007!2.01e-13!155;UBERON:0001555!2.01e-13!155;UBERON:0007026!2.01e-13!155;UBERON:0000466!3.23e-13!126;UBERON:0004921!7.86e-13!129;UBERON:0004185!7.86e-13!129;UBERON:0000464!1.11e-12!104;UBERON:0005177!1.18e-11!107;UBERON:0000077!4.67e-11!130;UBERON:0001004!5.79e-11!72;UBERON:0001041!1.69e-09!98;UBERON:0009569!5.73e-09!113;UBERON:0005911!6.86e-09!82;UBERON:0000065!3.17e-08!53;UBERON:0000489!3.72e-08!32;UBERON:0006554!3.87e-08!44;UBERON:0002113!4.80e-08!27;UBERON:0003918!4.80e-08!27;UBERON:0005095!4.80e-08!27;UBERON:0007687!4.80e-08!27;UBERON:0000064!5.16e-08!219;UBERON:0001008!1.21e-07!45;UBERON:0002553!2.23e-07!70;UBERON:0005153!3.72e-07!37;UBERON:0000058!6.83e-07!26;UBERON:0005181!6.84e-07!35;UBERON:0005172!7.37e-07!55;UBERON:0005173!7.37e-07!55;UBERON:0008947!9.17e-07!38;UBERON:0003258!9.17e-07!38 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;3.12e-11;30!UBERON:0001008;3.12e-11;30!UBERON:0002113;1.42e-09;24!UBERON:0011143;1.42e-09;24!UBERON:0000489;1.60e-09;29!UBERON:0004921;4.15e-09;33!UBERON:0004807;1.01e-07;22!UBERON:0006555;1.51e-07;15!UBERON:0004819;1.51e-07;15!UBERON:0001285;1.51e-07;15!UBERON:0007684;1.51e-07;15!UBERON:0002048;2.76e-07;22!UBERON:0000117;2.76e-07;22!UBERON:0000171;2.76e-07;22!UBERON:0000170;2.76e-07;22!UBERON:0005181;3.58e-07;35!UBERON:0005178;6.67e-07;34!UBERON:0002224;6.67e-07;34!UBERON:0001851;8.67e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,5.20e-19,160;UBERON:0000925,5.20e-19,160;UBERON:0006595,5.20e-19,160;UBERON:0005177,3.35e-15,101;UBERON:0001007,3.54e-15,145;UBERON:0001555,3.54e-15,145;UBERON:0007026,3.54e-15,145;UBERON:0006554,1.47e-13,47;UBERON:0004921,4.09e-13,118;UBERON:0001008,5.24e-13,48;UBERON:0001004,1.30e-11,74;UBERON:0009569,1.87e-11,112;UBERON:0002113,2.07e-10,26;UBERON:0003918,2.07e-10,26;UBERON:0011143,2.07e-10,26;UBERON:0005095,2.07e-10,26;UBERON:0007687,2.07e-10,26;UBERON:0000489,2.29e-10,31;UBERON:0005911,5.36e-10,82;UBERON:0005153,1.70e-09,37;UBERON:0001041,1.31e-08,87;UBERON:0005181,1.77e-08,35;UBERON:0005178,4.76e-08,34;UBERON:0002224,4.76e-08,34;UBERON:0000065,9.91e-08,54;UBERON:0006555,1.50e-07,16;UBERON:0004819,1.50e-07,16;UBERON:0002048,1.52e-07,22;UBERON:0000117,1.52e-07,22;UBERON:0000171,1.52e-07,22;UBERON:0000170,1.52e-07,22;UBERON:0005597,1.52e-07,22;UBERON:0000118,1.52e-07,22;UBERON:0005172,1.58e-07,54;UBERON:0005173,1.58e-07,54;UBERON:0005157,2.38e-07,47;UBERON:0004211,2.47e-07,15;UBERON:0009773,2.47e-07,15;UBERON:0001231,2.47e-07,15;UBERON:0001285,2.47e-07,15;UBERON:0007684,2.47e-07,15;UBERON:0004208,2.47e-07,15;UBERON:0005631,4.17e-07,14;UBERON:0000158,4.17e-07,14 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0.872338524100369,0,0,0,2.94880723801811,2.09340350391728,7.42700665242586,3.69273769519835,0,0,0,0,0,0,0,0.204000691244253,0,0,0.273748850145768,0.251085279189606,0,0,0,0,0,0.464448369948228,4.59710612239464,5.4217065380085,5.9160641626686,0,0,1.46800219667424,0,0,0,0.223915474239924,0,0,0.145398238779565,0.377875943688809,0,0,0,0,0.28769239232215,0.256160706529101,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0.112328631146495,0.300353785683013,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,0.560508562981536,0.263384084775077,0,0,0,0.501559486172034,0.32592226663359,0.473447805734733,0,0.111410456885174,0,0.443067789167242,0,0.128091319725675,0,0,0.276350017785848,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0.255973222308837,0,0,0,0,0,0.289648807765598,0,0,0.255725123687061,0,0,0,0,0,0.756278537312543,0.665188192387692,1.84453049955565,3.20898734969396,3.27865759463288,2.22470665670658,0,0,0,0,0,0,1.59009925893364,0,1.38856200643038,2.26123176769604,0.838998872419812,0.825354125820202,1.46296476575767,4.39308490587859,3.5576626268671,10.3763389957048,1.20848795132744,0.760272105718513,2.92874469057803,2.94130464276695,0.81014194788176,1.25019619597712,2.2452937262617,1.46394924628319,0,0.949265659568129,1.46561395144326,0,0,3.48875241714027,0,0,0,0,0,0,0,0,0.933633106199299,0.404132016209064,1.63461903113459,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0.794025282120147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.44499962275583,6.00041465299836,10.3249654340041,16.588424033625,16.5662210401857,13.5946913157337,12.3356655468291,14.6346093507864,21.533664185474,0,0,0,0,0,1.30137480043828,0.674338760312407,1.20505514941741,0.772057809126758,0.435758888184812,1.18635309555548,0.539325232640658,0,0.38474715694639,0.738155454624648,0,0,0,1.26755034821831,0.982827216677626,0.590789906681404,0,5.90344505006945,0.686271241194102,3.62175941848464,2.24803506515239,3.61904300681871,5.46271826435325,0,0,0,0.695582429850461,1.52631302506568,1.58803092537181,1.85194205030644,2.09279567458058,2.37061319387782,3.43394464837949,0,0,0,2.81201501960331,6.55130299975552,6.37987937590739,8.06026704325635,7.84711633987697,7.28427090413901,0,0,0,0.288239906833923,0.12624243342638,0.063497894292169,0.381988425558278,2.34434894420094,0,0.411309970813294,0.300343057843917,0,0.112131084345361,0.43596006883328,0,0,0,0,0.26593811658487,0,0,0,0,0.428933980974443,0,0.823240336780769,0,0.355391948742546,0,0,0,0.599837947092342,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0.197030760201927,0.215627574859517,0.385029108839245,0.254094624222463,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0,0.415941723061614,0,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0.215714200818617,0.106727557803444,2.72814814301633,4.99306318531491,5.14063498660456,0,0,0,0,0,0.160853921143607,1.48418066444991,0,0,0,0,0,5.68039413080624,8.82228469334453,10.5893137276281,0,0,0,4.96319574198153,7.08541101360616,5.49044838423799,2.92278449306521,5.59423633132241,2.27466768141793,1.19065593693561,4.53423423814493,3.08454505380579,2.43851793789468,2.00675909541941,5.09752546090077,4.15538004464362,3.58199607555485,0.219259876645935,0,0,0,0.325378394664303,7.00678879204511,0,0,3.44559322797703,0.650060246036521,0,0,0,0,0.137836572484531,0,0,0,0,10.2476647523806,15.3752053892085,33.434530673581,12.0377759218104,0,0,0,0,0,0,0,0.286249773483982,0,0.316379424718726,0.571890581771475,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0.196498082026242,0,0,0,0,0,0.349934720244983,4.52243929809907,3.35151137767894,4.3556393944529,6.49592225359776,4.73555909938353,0,2.66058092122005,8.95921260807142,0,0,0,0,0,0,0,0,1.81600920916704,0.962479855263359,11.0268097191464,0.371606350251437,0.865615277858669,0,0.797131363644112,0,0.383010740264733,1.48171507906718,0,0.280797178113459,0,0,2.50634477090067,2.37008488922245,0,0,1.70338495076131,0,0,0,0,0,0,0,0.540911356951966,0,7.04935025439248,13.0998378285754,3.07667176470977,1.57768678274367,0,0,25.7844043516705,5.64232893582013,13.8222315944654,0,0.281338832821026,1.66963057534359,0.329607748453519,5.48926061132783,2.19172787076177,4.14425873296722,1.76352923497993,2.35217969754956,0,0.311039587661807,14.289067832425,9.13007990845607,0,2.66337195219721,0,0,0,0.0927680981618513,0,10.1566826823241,8.83345999961577,4.34999745260876,7.51036758684298,7.88186315907576,6.85524277127015,0.344743373241465,0,0.694499979733169,0,0.120596438625408,0,0.110579259931225,0,0.438770794307945,0.10893846351899,9.34139086666642,1.84680620409113,0.113942055847001,4.6112780877612,16.5154065713981,10.4301477045128,19.1400695839152,2.74792780205587,10.6606955203727,0,0,2.32696354660219,0,0.19606253431774,0,2.08729105996604,0.158936578980379,15.613856775074,8.65133883243483,10.4601272861116,0.865554558968364,1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| ||
|short_description=p4@FGD4 | |short_description=p4@FGD4 | ||
}} | }} |
Latest revision as of 04:59, 18 September 2015
Short description: | p4@FGD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FGD4_5end |
Coexpression cluster: | C128_testicular_choriocarcinoma_H9_teratocarcinoma_pancreatic_iPS_HES3GFP |
Association with transcript: | 0bp_to_ENST00000550091_5end |
EntrezGene: | FGD4 |
HGNC: | 19125 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.30e-49 | 253 |
endo-epithelial cell | 3.35e-17 | 42 |
endodermal cell | 2.07e-16 | 58 |
epithelial cell of alimentary canal | 7.12e-09 | 20 |
kidney cell | 1.80e-08 | 17 |
kidney epithelial cell | 1.80e-08 | 17 |
squamous epithelial cell | 7.34e-08 | 63 |
respiratory epithelial cell | 1.02e-07 | 13 |
germ line cell | 1.48e-07 | 7 |
germ cell | 1.48e-07 | 7 |
epithelial cell of nephron | 2.47e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.25e-30 | 106 |
cell type cancer | 1.43e-22 | 143 |
squamous cell carcinoma | 2.36e-11 | 14 |
cancer | 1.29e-10 | 235 |
adenocarcinoma | 1.88e-10 | 25 |
disease of cellular proliferation | 8.55e-10 | 239 |