FFCP PHASE1:Hg19::chr19:41848116..41848193,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7040 | |EntrezGene=7040 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11766 | |HGNC=11766 | ||
|TSSclassifier=strong | |||
|UniProt=P01137 | |UniProt=P01137 | ||
|association_with_transcript=-303bp_to_M38449_5end | |association_with_transcript=-303bp_to_M38449_5end | ||
|cluster_id=chr19:41848116..41848193,- | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_8_at_TGFB1_5end | |description=CAGE_peak_8_at_TGFB1_5end | ||
|id=chr19:41848116..41848193,- | |id=chr19:41848116..41848193,- | ||
|ontology_enrichment_celltype=CL:0000766!2.18e-26!76;CL:0002057!8.52e-26!42;CL:0000738!1.21e-25!140;CL:0000134!5.26e-24!358;CL:0002320!8.04e-24!365;CL:0000048!9.15e-24!430;CL:0000723!2.94e-23!436;CL:0002031!4.71e-23!124;CL:0002032!5.05e-23!165;CL:0000837!5.05e-23!165;CL:0002087!1.11e-22!119;CL:0000988!1.34e-22!182;CL:0000037!2.01e-22!172;CL:0000566!2.01e-22!172;CL:0000034!2.14e-22!444;CL:0000860!4.18e-22!45;CL:0000557!2.29e-20!71;CL:0000839!3.21e-20!70;CL:0002194!2.76e-19!63;CL:0000576!2.76e-19!63;CL:0000040!2.76e-19!63;CL:0000559!2.76e-19!63;CL:0000763!4.68e-19!112;CL:0000049!4.68e-19!112;CL:0002009!5.90e-19!65;CL:0000219!3.15e-17!390;CL:0002371!7.33e-16!591;CL:0000144!1.64e-14!625;CL:0000003!2.02e-14!722;CL:0000063!2.56e-10!578;CL:0000012!5.80e-08!682;CL:0000548!8.89e-08!679;CL:0000004!8.89e-08!679;CL:0000255!8.89e-08!679;CL:0002393!7.05e-07!9;CL:0002397!7.05e-07!9 | |ontology_enrichment_celltype=CL:0000766!2.18e-26!76;CL:0002057!8.52e-26!42;CL:0000738!1.21e-25!140;CL:0000134!5.26e-24!358;CL:0002320!8.04e-24!365;CL:0000048!9.15e-24!430;CL:0000723!2.94e-23!436;CL:0002031!4.71e-23!124;CL:0002032!5.05e-23!165;CL:0000837!5.05e-23!165;CL:0002087!1.11e-22!119;CL:0000988!1.34e-22!182;CL:0000037!2.01e-22!172;CL:0000566!2.01e-22!172;CL:0000034!2.14e-22!444;CL:0000860!4.18e-22!45;CL:0000557!2.29e-20!71;CL:0000839!3.21e-20!70;CL:0002194!2.76e-19!63;CL:0000576!2.76e-19!63;CL:0000040!2.76e-19!63;CL:0000559!2.76e-19!63;CL:0000763!4.68e-19!112;CL:0000049!4.68e-19!112;CL:0002009!5.90e-19!65;CL:0000219!3.15e-17!390;CL:0002371!7.33e-16!591;CL:0000144!1.64e-14!625;CL:0000003!2.02e-14!722;CL:0000063!2.56e-10!578;CL:0000012!5.80e-08!682;CL:0000548!8.89e-08!679;CL:0000004!8.89e-08!679;CL:0000255!8.89e-08!679;CL:0002393!7.05e-07!9;CL:0002397!7.05e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.92e-23;33!CL:0002057;1.92e-23;33!CL:0000473;2.95e-19;39!CL:0000234;2.95e-19;39!CL:0000576;7.85e-17;48!CL:0000766;9.93e-17;69!CL:0000763;5.12e-09;100!CL:0002087;3.89e-08;104!CL:0000094;9.33e-08;8!CL:0000738;2.41e-07;136!CL:0000081;7.16e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,6.91e-34,72;CL:0000860,1.72e-32,42;CL:0002057,1.72e-32,42;CL:0000473,3.34e-32,48;CL:0000234,3.34e-32,48;CL:0000738,7.63e-31,136;CL:0000988,1.32e-27,177;CL:0002032,4.06e-27,161;CL:0000837,4.06e-27,161;CL:0000037,4.76e-27,168;CL:0002031,2.19e-26,120;CL:0000557,2.60e-26,67;CL:0002087,3.71e-26,115;CL:0000839,3.74e-26,66;CL:0002194,1.08e-24,59;CL:0000576,1.08e-24,59;CL:0000040,1.08e-24,59;CL:0000559,1.08e-24,59;CL:0000763,2.22e-24,108;CL:0000049,2.22e-24,108;CL:0002009,4.76e-24,61;CL:0000134,8.17e-23,354;CL:0002320,8.17e-23,361;CL:0000048,1.10e-19,427;CL:0000723,3.86e-19,433;CL:0000034,2.40e-18,441;CL:0000219,7.37e-16,386;CL:0002393,2.39e-08,9;CL:0002397,2.39e-08,9;CL:0000094,1.14e-07,8;CL:0000081,5.31e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.30e-23;42!CL:0000049;1.58e-07;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.71e-23!102;UBERON:0003061!3.71e-23!102;UBERON:0002193!1.91e-22!112;UBERON:0002384!1.92e-21!375;UBERON:0003081!1.11e-19!216;UBERON:0002371!1.04e-17!80;UBERON:0001474!8.10e-17!86;UBERON:0002405!4.45e-16!115;UBERON:0004765!7.73e-12!101;UBERON:0001434!7.73e-12!101;UBERON:0002204!1.09e-09!167 | |ontology_enrichment_uberon=UBERON:0002390!3.71e-23!102;UBERON:0003061!3.71e-23!102;UBERON:0002193!1.91e-22!112;UBERON:0002384!1.92e-21!375;UBERON:0003081!1.11e-19!216;UBERON:0002371!1.04e-17!80;UBERON:0001474!8.10e-17!86;UBERON:0002405!4.45e-16!115;UBERON:0004765!7.73e-12!101;UBERON:0001434!7.73e-12!101;UBERON:0002204!1.09e-09!167 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.28e-07;15!UBERON:0000179;1.28e-07;15!UBERON:0000463;1.28e-07;15 | |||
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| ||
|short_description=p8@TGFB1 | |short_description=p8@TGFB1 | ||
}} | }} |
Latest revision as of 05:06, 18 September 2015
Short description: | p8@TGFB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_TGFB1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -303bp_to_M38449_5end |
EntrezGene: | TGFB1 |
HGNC: | 11766 |
UniProt: | P01137 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.83e-29 | 98 |
blood island | 1.83e-29 | 98 |
lateral plate mesoderm | 4.58e-27 | 203 |
hemolymphoid system | 2.63e-26 | 108 |
bone marrow | 1.31e-22 | 76 |
bone element | 1.46e-21 | 82 |
connective tissue | 1.82e-20 | 371 |
immune system | 4.47e-20 | 93 |
skeletal element | 7.60e-19 | 90 |
skeletal system | 6.49e-15 | 100 |
mesoderm | 8.42e-14 | 315 |
mesoderm-derived structure | 8.42e-14 | 315 |
presumptive mesoderm | 8.42e-14 | 315 |
musculoskeletal system | 3.36e-10 | 167 |
blood | 1.46e-07 | 15 |
haemolymphatic fluid | 1.46e-07 | 15 |
organism substance | 1.46e-07 | 15 |