FFCP PHASE1:Hg19::chr3:42055233..42055299,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:42055233..42055299,+
|short_description=p5@TRAK1
|description=CAGE_peak_5_at_TRAK1_5end
|association_with_transcript=0bp_to_ENST00000487159_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22906 | |EntrezGene=22906 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29947 | |HGNC=29947 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000487159_5end | |||
|cluster_id=chr3:42055233..42055299,+ | |||
|description=CAGE_peak_5_at_TRAK1_5end | |||
|id=chr3:42055233..42055299,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.19e-10!94;UBERON:0001016!2.19e-10!94;UBERON:0007023!1.01e-09!115;UBERON:0001017!1.40e-09!82;UBERON:0005743!1.54e-09!86;UBERON:0001049!1.38e-08!57;UBERON:0005068!1.38e-08!57;UBERON:0006241!1.38e-08!57;UBERON:0007135!1.38e-08!57;UBERON:0000955!9.30e-08!69;UBERON:0006238!9.30e-08!69;UBERON:0002616!1.86e-07!59;UBERON:0003075!8.33e-07!86;UBERON:0007284!8.33e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.27e-10,89;UBERON:0001017,7.41e-10,81;UBERON:0007023,7.65e-09,114;UBERON:0001049,3.01e-08,56;UBERON:0005068,3.01e-08,56;UBERON:0006241,3.01e-08,56;UBERON:0007135,3.01e-08,56;UBERON:0000955,2.51e-07,68;UBERON:0006238,2.51e-07,68;UBERON:0000073,2.72e-07,53;UBERON:0002616,2.72e-07,53;UBERON:0003075,2.76e-07,82;UBERON:0007284,2.76e-07,82 | |||
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| ||
|short_description=p5@TRAK1 | |||
}} | }} |
Latest revision as of 05:40, 18 September 2015
Short description: | p5@TRAK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TRAK1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000487159_5end |
EntrezGene: | TRAK1 |
HGNC: | 29947 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 2.27e-10 | 89 |
central nervous system | 7.41e-10 | 81 |
adult organism | 7.65e-09 | 114 |
neural tube | 3.01e-08 | 56 |
neural rod | 3.01e-08 | 56 |
future spinal cord | 3.01e-08 | 56 |
neural keel | 3.01e-08 | 56 |
brain | 2.51e-07 | 68 |
future brain | 2.51e-07 | 68 |
regional part of nervous system | 2.72e-07 | 53 |
regional part of brain | 2.72e-07 | 53 |
neural plate | 2.76e-07 | 82 |
presumptive neural plate | 2.76e-07 | 82 |